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The map label for this gene is 197116651

Identifier: 197116651

GI number: 197116651

Start: 295112

End: 296548

Strand: Direct

Name: 197116651

Synonym: Gbem_0251

Alternate gene names: NA

Gene position: 295112-296548 (Clockwise)

Preceding gene: 197116650

Following gene: 197116653

Centisome position: 6.39

GC content: 61.45

Gene sequence:

>1437_bases
ATGCAACTTGAGAAAGAGCGCGACAGCCTGAGCAACGAGATGGCCAGGCTCGGCAAGGCACTGGTCCTGCAGCTCTTCAT
ACTGCTCAAGACTTCCAGTAACTACAGCGAAGGGCACGCGGCGCTGGACCTGCCGCTGGCCAACCTGCTGAAGGTGGTGC
GGGATATCGCCCGTAGAAACGAGGACGCCTCGCTGAGGCTCCGTGGAGGGCACCTCTACCTTGGCGAACTGCGGCTAAAG
CCGGACATCGCCAATTTCGAGGCGCCGCGATACGTAATCGAGGAGATGAAGCGCCATCTGGTGGGAAGGCTCTCTTTCAT
GCCGGAGGTGAGCGCGGACGACCTGCGCCGGTTCGTGTACGCCTTGCGGGAGGTGGATGCCGCCGAACTCCTCGACGCTT
ACACCGGCCTTCTGGATGGGATGCAGCAGAGGATGGTCGCCCATATCGAGGTGGAGGTTCTGCGCGACGACGAGGTGCTG
ATTCCGGATACGGTGCAGTTGCAGGAGAACAACCTCAAGGCCCGCCCTCTGTACAAGAAGGTGCTGGCCGCCATGGACGA
GGTGGCGGCGCAGATGGTGGCCGGGCGGAGCCTGAGGCTTCGGGAGTCGAAGCGGGTGGTGCAGCAGATGATCGACCTGC
TCTTCAGCCACGAGTCGGATCTCCTCGGGCTCAGCACCATGCGCTCCCACGACCGCTCCTCGCAGCACCATGCTGCCAAC
GTCTGCATCCTCTCGCTGGTGATGGGCAAAAGGCTCGGCATGTCCAAGTTCCATCTCTGCGAACTGGGGCTCGCCGCGCT
GTTCCACGACTTGGGCAAAGCCGACGTCCCCAAGGAGATACTGGACAAGCCCAGCGCGCTGACGCGCGAGGAACGGCGCA
TCATGGAGAACCACGTTCTTTACGGCGTGAAGAAGGTGATGAAGCTGAAGGGATTCGATGCGCTATCGTCCCGGATCATC
ACCGGGATCTTCGAGCACCACCTGCAGGCGGATTTTTCGGGGTATCCGCGTTTTCCCTACCAAAGGCTCAGCCTCTTCGG
CAGGATCATCAACATCGCGGACTGTTACGACGGGCTTACCTCGTCCCGGGTCAGCGGCAGGAACGCCTATCCCCCCCACA
AGGCGCTCAGGGTGATGCTCGCCCAGGCGGGAACGGCGTACGACCAACCGCTTTTGAAGCTCTTCATCAACTGCATCGGC
ATACATGCCATCGGTTCCTTGCTGCTTCTGGACAGCAACGAGTTGGCGGTCGTGGTGGGTAACAGCGCGGACCCTACCCA
GTGGGACAATCCCCGCGTGCGCATCATCGCCGACGCCAAAGGGCGCGAGGTCGAGGGGGAGATCATCGACTTAGGCCATC
CCACCTGCTTCAGGACCATTTCCGCCACCCTCGACCCCTACCTCTACGACCTCGACGTGAGCCGCTATTTCTATTAG

Upstream 100 bases:

>100_bases
CAAGCGTTCAGGCGAGGTAAGGGATCTTTTGGAGCAGGCCATCGCCGCCTTGGCTCTAGCGCGGGCTAAGAGGAGCGGTT
AATGCGGGCGAGGTGTGAAC

Downstream 100 bases:

>100_bases
TCATACCTGCCGCAAGAACTGAAGCTAGTCATAGACCACGGTAAGCAGCGGAGCGTTCACCTTGGTCTCCTCGTCTATTT
CGACCAGTCCCGGCACAGGG

Product: cyclic diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MQLEKERDSLSNEMARLGKALVLQLFILLKTSSNYSEGHAALDLPLANLLKVVRDIARRNEDASLRLRGGHLYLGELRLK
PDIANFEAPRYVIEEMKRHLVGRLSFMPEVSADDLRRFVYALREVDAAELLDAYTGLLDGMQQRMVAHIEVEVLRDDEVL
IPDTVQLQENNLKARPLYKKVLAAMDEVAAQMVAGRSLRLRESKRVVQQMIDLLFSHESDLLGLSTMRSHDRSSQHHAAN
VCILSLVMGKRLGMSKFHLCELGLAALFHDLGKADVPKEILDKPSALTREERRIMENHVLYGVKKVMKLKGFDALSSRII
TGIFEHHLQADFSGYPRFPYQRLSLFGRIINIADCYDGLTSSRVSGRNAYPPHKALRVMLAQAGTAYDQPLLKLFINCIG
IHAIGSLLLLDSNELAVVVGNSADPTQWDNPRVRIIADAKGREVEGEIIDLGHPTCFRTISATLDPYLYDLDVSRYFY

Sequences:

>Translated_478_residues
MQLEKERDSLSNEMARLGKALVLQLFILLKTSSNYSEGHAALDLPLANLLKVVRDIARRNEDASLRLRGGHLYLGELRLK
PDIANFEAPRYVIEEMKRHLVGRLSFMPEVSADDLRRFVYALREVDAAELLDAYTGLLDGMQQRMVAHIEVEVLRDDEVL
IPDTVQLQENNLKARPLYKKVLAAMDEVAAQMVAGRSLRLRESKRVVQQMIDLLFSHESDLLGLSTMRSHDRSSQHHAAN
VCILSLVMGKRLGMSKFHLCELGLAALFHDLGKADVPKEILDKPSALTREERRIMENHVLYGVKKVMKLKGFDALSSRII
TGIFEHHLQADFSGYPRFPYQRLSLFGRIINIADCYDGLTSSRVSGRNAYPPHKALRVMLAQAGTAYDQPLLKLFINCIG
IHAIGSLLLLDSNELAVVVGNSADPTQWDNPRVRIIADAKGREVEGEIIDLGHPTCFRTISATLDPYLYDLDVSRYFY
>Mature_478_residues
MQLEKERDSLSNEMARLGKALVLQLFILLKTSSNYSEGHAALDLPLANLLKVVRDIARRNEDASLRLRGGHLYLGELRLK
PDIANFEAPRYVIEEMKRHLVGRLSFMPEVSADDLRRFVYALREVDAAELLDAYTGLLDGMQQRMVAHIEVEVLRDDEVL
IPDTVQLQENNLKARPLYKKVLAAMDEVAAQMVAGRSLRLRESKRVVQQMIDLLFSHESDLLGLSTMRSHDRSSQHHAAN
VCILSLVMGKRLGMSKFHLCELGLAALFHDLGKADVPKEILDKPSALTREERRIMENHVLYGVKKVMKLKGFDALSSRII
TGIFEHHLQADFSGYPRFPYQRLSLFGRIINIADCYDGLTSSRVSGRNAYPPHKALRVMLAQAGTAYDQPLLKLFINCIG
IHAIGSLLLLDSNELAVVVGNSADPTQWDNPRVRIIADAKGREVEGEIIDLGHPTCFRTISATLDPYLYDLDVSRYFY

Specific function: Unknown

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53899; Mature: 53899

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLEKERDSLSNEMARLGKALVLQLFILLKTSSNYSEGHAALDLPLANLLKVVRDIARRN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHCC
EDASLRLRGGHLYLGELRLKPDIANFEAPRYVIEEMKRHLVGRLSFMPEVSADDLRRFVY
CCCEEEEECCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ALREVDAAELLDAYTGLLDGMQQRMVAHIEVEVLRDDEVLIPDTVQLQENNLKARPLYKK
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEECCCCEEEECCCCCCCHHHHH
VLAAMDEVAAQMVAGRSLRLRESKRVVQQMIDLLFSHESDLLGLSTMRSHDRSSQHHAAN
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHH
VCILSLVMGKRLGMSKFHLCELGLAALFHDLGKADVPKEILDKPSALTREERRIMENHVL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHH
YGVKKVMKLKGFDALSSRIITGIFEHHLQADFSGYPRFPYQRLSLFGRIINIADCYDGLT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHH
SSRVSGRNAYPPHKALRVMLAQAGTAYDQPLLKLFINCIGIHAIGSLLLLDSNELAVVVG
HCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEC
NSADPTQWDNPRVRIIADAKGREVEGEIIDLGHPTCFRTISATLDPYLYDLDVSRYFY
CCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHCCEEEEECHHHHCC
>Mature Secondary Structure
MQLEKERDSLSNEMARLGKALVLQLFILLKTSSNYSEGHAALDLPLANLLKVVRDIARRN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHCC
EDASLRLRGGHLYLGELRLKPDIANFEAPRYVIEEMKRHLVGRLSFMPEVSADDLRRFVY
CCCEEEEECCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ALREVDAAELLDAYTGLLDGMQQRMVAHIEVEVLRDDEVLIPDTVQLQENNLKARPLYKK
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEECCCCEEEECCCCCCCHHHHH
VLAAMDEVAAQMVAGRSLRLRESKRVVQQMIDLLFSHESDLLGLSTMRSHDRSSQHHAAN
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHH
VCILSLVMGKRLGMSKFHLCELGLAALFHDLGKADVPKEILDKPSALTREERRIMENHVL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHH
YGVKKVMKLKGFDALSSRIITGIFEHHLQADFSGYPRFPYQRLSLFGRIINIADCYDGLT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHH
SSRVSGRNAYPPHKALRVMLAQAGTAYDQPLLKLFINCIGIHAIGSLLLLDSNELAVVVG
HCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEC
NSADPTQWDNPRVRIIADAKGREVEGEIIDLGHPTCFRTISATLDPYLYDLDVSRYFY
CCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHCCEEEEECHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]