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The map label for this gene is ubiX [C]

Identifier: 197116633

GI number: 197116633

Start: 277255

End: 277866

Strand: Direct

Name: ubiX [C]

Synonym: Gbem_0233

Alternate gene names: 197116633

Gene position: 277255-277866 (Clockwise)

Preceding gene: 197116632

Following gene: 197116634

Centisome position: 6.01

GC content: 65.2

Gene sequence:

>612_bases
GTGAAGCCCAGACACTTCACCGTCGCCATCACCGGCGCCTCGGGCGTCGTCTACGGCCTCAAGGTGGTCGAGGAACTGCT
GCGCGGCGGGTCCAGGGTAAGCCTGCTGGTCTCGGAGGCGGGGTTCGCGGTCTTGCGGCAGGAATGCGGGCTAGATCTAG
CGGGTACCCCGGGCGAAATCCTGGACGGTGTGCGCTCGCACCTGGGGCTTCCTGGGGAGCTTCTTGGCTACTACGACTTA
AACGATCTTTTCGCGCCTATCGCCAGCGGCTCTGCGGCTCCGGACGCCATGCTGGTGGTCCCCTGTTCCATGGGGACGCT
GTCGCGGATCAGCTGCGGAAATTCGGGGAACCTGCTGGAGCGGGCGGCTGACGTCATGCTCAAAGAGGGGCGTCCACTGG
TGCTGGTGCCGCGCGAGACCCCCTTCAACGCGATTCACCTCGAGCACATGCTGAAGCTGGCCCGGCTCGGGGTGCGCATA
GTGCCGGCCATGCCCGGCTTCTACCACGATCCCGAGACCATAGAAGACCTGGTCGATTTCGTGGCCGGAAAGGTGCTGGA
CGCAGTGCAGGTGGAGCACACGCTCTTCAGGCGCTGGGGAAGCCGGCCGTAA

Upstream 100 bases:

>100_bases
ATTTAAGCCGCCTGGATGCCGCTTTCTTCAACATGAACGGCTACATCAGCGTGACGCTCTTCGCGGCGACGCTCTTGGAT
AGGGTCTCGGCGGGGGGGAT

Downstream 100 bases:

>100_bases
ACGAAAAAGGAAAGAACCATGACTTTTGCCACCATAGCGGAGAAGGTGCGGGCGGGCGGACGCATCACGGAGCCAGAGGC
GCTCGTGCTTTTCGAGCACC

Product: ubiquinone biosynthesis factor UbiX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MKPRHFTVAITGASGVVYGLKVVEELLRGGSRVSLLVSEAGFAVLRQECGLDLAGTPGEILDGVRSHLGLPGELLGYYDL
NDLFAPIASGSAAPDAMLVVPCSMGTLSRISCGNSGNLLERAADVMLKEGRPLVLVPRETPFNAIHLEHMLKLARLGVRI
VPAMPGFYHDPETIEDLVDFVAGKVLDAVQVEHTLFRRWGSRP

Sequences:

>Translated_203_residues
MKPRHFTVAITGASGVVYGLKVVEELLRGGSRVSLLVSEAGFAVLRQECGLDLAGTPGEILDGVRSHLGLPGELLGYYDL
NDLFAPIASGSAAPDAMLVVPCSMGTLSRISCGNSGNLLERAADVMLKEGRPLVLVPRETPFNAIHLEHMLKLARLGVRI
VPAMPGFYHDPETIEDLVDFVAGKVLDAVQVEHTLFRRWGSRP
>Mature_203_residues
MKPRHFTVAITGASGVVYGLKVVEELLRGGSRVSLLVSEAGFAVLRQECGLDLAGTPGEILDGVRSHLGLPGELLGYYDL
NDLFAPIASGSAAPDAMLVVPCSMGTLSRISCGNSGNLLERAADVMLKEGRPLVLVPRETPFNAIHLEHMLKLARLGVRI
VPAMPGFYHDPETIEDLVDFVAGKVLDAVQVEHTLFRRWGSRP

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=200, Percent_Identity=36.5, Blast_Score=115, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6320746, Length=198, Percent_Identity=37.8787878787879, Blast_Score=137, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 21811; Mature: 21811

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPRHFTVAITGASGVVYGLKVVEELLRGGSRVSLLVSEAGFAVLRQECGLDLAGTPGEI
CCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCHHH
LDGVRSHLGLPGELLGYYDLNDLFAPIASGSAAPDAMLVVPCSMGTLSRISCGNSGNLLE
HHHHHHHCCCCHHHHCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCHHCCCCCCCCHHH
RAADVMLKEGRPLVLVPRETPFNAIHLEHMLKLARLGVRIVPAMPGFYHDPETIEDLVDF
HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHH
VAGKVLDAVQVEHTLFRRWGSRP
HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKPRHFTVAITGASGVVYGLKVVEELLRGGSRVSLLVSEAGFAVLRQECGLDLAGTPGEI
CCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCHHH
LDGVRSHLGLPGELLGYYDLNDLFAPIASGSAAPDAMLVVPCSMGTLSRISCGNSGNLLE
HHHHHHHCCCCHHHHCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCHHCCCCCCCCHHH
RAADVMLKEGRPLVLVPRETPFNAIHLEHMLKLARLGVRIVPAMPGFYHDPETIEDLVDF
HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHH
VAGKVLDAVQVEHTLFRRWGSRP
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]