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The map label for this gene is recR

Identifier: 197116610

GI number: 197116610

Start: 248065

End: 248658

Strand: Reverse

Name: recR

Synonym: Gbem_0210

Alternate gene names: 197116610

Gene position: 248658-248065 (Counterclockwise)

Preceding gene: 197116611

Following gene: 197116609

Centisome position: 5.39

GC content: 59.6

Gene sequence:

>594_bases
ATGCTACATTTTTCGGGCTCGCTGACCAGGCTGGTGGGGGAGCTGAAGAAATTGCCCGGGGTGGGCGAGAAGAGCGCGCA
GAGACTGGCCTTTCATTTGCTGAAACATCCGAGCAATATCGAAGCCTTAGCGCAAAGCCTCCTGCAGGTGGGAGAAAGGG
TGCATCTGTGCTCGGTCTGTTTTGCCATCACCGAGGACGATCCGTGCTGGATCTGTTCCGGCGAGCGCGATAGCGGCACC
ATCTGCGTGGTCGAAGAGCCGCAGGACCTTCTGGCACTGGAAAGAAGCCGCGCTTTTAGCGGCCGCTACCACGTGCTGCA
GGGTGCACTTTCACCTTTAAACGGTGTTACGCCCAAGGACCTGAGGATCGCCGAGTTGATGCAGCGGCTTCAGGGGGGGG
AGGTGCGCGAGGTGCTGATCGCCACCAATTTCACCGTCGAGGGTGAAGCCACCGCGCTCTACCTGACCAGACTGATAAAA
CCGCTGTCTATAAAGGTCACCAGGCTGGCACACGGCATACCTGTCGGCAGCGACCTGGAATATGTCGATGCCGCGACGGT
GCAGCGGGCAGTCGAGGGGCGTTCCGAGTTGTAG

Upstream 100 bases:

>100_bases
GCACGCCGCAAGGCATGCACCCTTTAATTATAGATTTCTTGACTGAAATTTTTTTTCGTAAAATTAACCAGTAAAAACTT
GTTTTATCCGTGGTGGGAAT

Downstream 100 bases:

>100_bases
CGGCGACCGGGAAGGAAGAGCCACCGGAAAACAACGTTTGTCGCGGGGCGGATCGCTGTCCGCTGCCACACCGCAACAGG
TCTTCAGTCACGGTTTCAAT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MLHFSGSLTRLVGELKKLPGVGEKSAQRLAFHLLKHPSNIEALAQSLLQVGERVHLCSVCFAITEDDPCWICSGERDSGT
ICVVEEPQDLLALERSRAFSGRYHVLQGALSPLNGVTPKDLRIAELMQRLQGGEVREVLIATNFTVEGEATALYLTRLIK
PLSIKVTRLAHGIPVGSDLEYVDAATVQRAVEGRSEL

Sequences:

>Translated_197_residues
MLHFSGSLTRLVGELKKLPGVGEKSAQRLAFHLLKHPSNIEALAQSLLQVGERVHLCSVCFAITEDDPCWICSGERDSGT
ICVVEEPQDLLALERSRAFSGRYHVLQGALSPLNGVTPKDLRIAELMQRLQGGEVREVLIATNFTVEGEATALYLTRLIK
PLSIKVTRLAHGIPVGSDLEYVDAATVQRAVEGRSEL
>Mature_197_residues
MLHFSGSLTRLVGELKKLPGVGEKSAQRLAFHLLKHPSNIEALAQSLLQVGERVHLCSVCFAITEDDPCWICSGERDSGT
ICVVEEPQDLLALERSRAFSGRYHVLQGALSPLNGVTPKDLRIAELMQRLQGGEVREVLIATNFTVEGEATALYLTRLIK
PLSIKVTRLAHGIPVGSDLEYVDAATVQRAVEGRSEL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=193, Percent_Identity=46.6321243523316, Blast_Score=167, Evalue=4e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_GEOBB (B5E9A4)

Other databases:

- EMBL:   CP001124
- RefSeq:   YP_002137037.1
- GeneID:   6783032
- GenomeReviews:   CP001124_GR
- KEGG:   gbm:Gbem_0210
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21525; Mature: 21525

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHFSGSLTRLVGELKKLPGVGEKSAQRLAFHLLKHPSNIEALAQSLLQVGERVHLCSVC
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
FAITEDDPCWICSGERDSGTICVVEEPQDLLALERSRAFSGRYHVLQGALSPLNGVTPKD
HHCCCCCCEEEECCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
LRIAELMQRLQGGEVREVLIATNFTVEGEATALYLTRLIKPLSIKVTRLAHGIPVGSDLE
HHHHHHHHHHCCCCEEEEEEEECEEECCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCH
YVDAATVQRAVEGRSEL
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLHFSGSLTRLVGELKKLPGVGEKSAQRLAFHLLKHPSNIEALAQSLLQVGERVHLCSVC
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
FAITEDDPCWICSGERDSGTICVVEEPQDLLALERSRAFSGRYHVLQGALSPLNGVTPKD
HHCCCCCCEEEECCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
LRIAELMQRLQGGEVREVLIATNFTVEGEATALYLTRLIKPLSIKVTRLAHGIPVGSDLE
HHHHHHHHHHCCCCEEEEEEEECEEECCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCH
YVDAATVQRAVEGRSEL
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA