Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 197116591

Identifier: 197116591

GI number: 197116591

Start: 225103

End: 226815

Strand: Direct

Name: 197116591

Synonym: Gbem_0191

Alternate gene names: NA

Gene position: 225103-226815 (Clockwise)

Preceding gene: 197116590

Following gene: 197116592

Centisome position: 4.88

GC content: 63.98

Gene sequence:

>1713_bases
ATGTCATTTGACGGTGATTTAGAGCACCTGCCCATAGTCGACGTGATCCAGTTGCTGCACGCGACCGGCAAGTCCGGCAC
CTTGACCTTGAAAAGCGCCAAGGGTGAGAGCCAGCTGGCCTTTGTGGACGGGTTCGTGGTCAGCGCGAATCACGTGAACA
ACAGCGTCAGGATCGGCCAGATCATGCTCGACATGGGGCTGATCACCAAAGAGAACCTCGATCTGGCGCTTAAGGAGCAG
AGATCCGCCGGCTCGCAGCGCAAGCCGATCATCCAGACCCTGATCGAGGGGGGGGTGGTCAAGACTTCGGATGCCTACAA
GGGACTCGAAGCGCTGATCGAAATGACCATCGTCGAGGTCCTCACCTGGACCAGGGGGACCTTCTCCCTCGACGTCAACG
AGTCCGTCGTTTCCGACGACTACCGCTACTTCCCCGAACAGGTCAAGCAGGAGATCCACCTCAACACGCAGAACCTGTTG
ATGGACGCCCTGCGCATCTACGATGAGCGTAAGCGCGACGGCACCCTCACCCCCGAGGCCATGTTCGGTACCGCAGAGCC
ACCGATGCCGGAAGCGCCTGCCGGCGCCGCTGAGATATCCGCCGTCGACCTGGGGCTGGAGGAACTGGACGAGCTGGAAA
GGCGCATCCCCCAGCACTTCGCCCCCCTGGCTGAGGAGCTCCCCGACACCCCGTCCAACAGGCTCCGGGACGAGCTGACG
GGAATCCCCGTGGAGGAACAGCAGCTGCTTTTCCGCTACCTGGAGCAGCTGCCGCAGCCTCAGGAGGGGGCCTTCGCCGG
AACCGGGGTGGTGCTCTACACCACCGACAAGGTGCTGCGCGAATGCGTGGCCGCCGTCTGCGGCGCAAGCTTTCTCTGCG
CGACCGACGATCCTTCCCATATCGATGCGGTCCTCGACCAGGCCCTCTCCAGGCAGCGCCTTCCCTTGCTGTTGGTGGAT
GCCGGCGAGCCGGGTGACGGAGCTGCTCTGCTCGCGTTTGCGCAGCAAAGACGGGAACGTCATCCCGATCTCCCCATCGT
CCTTCTCGCCTCCCCCGGCGACTACGCGCTCTTCGCACGCGCATTCGACGTCGGAGCCAGCGCGTTTTTGCCCCGCGCCA
CCAGAAAGGAGCGTGCCGGGAGCTTCATCGCCGATGCTATAGAGAGCTGTCGAGCCCTGGCCGGCTACCTGGAAAAGCGC
AGCGAGGAGCCCGGGCTCGCGCTGTTGCCCAGGTTCAGAAGCAGCTTTCTGGCCCTTTCCGAGCAGCGCGACCCGCCGGA
GGTCACCTTTGCGCTGCTGCAGGCGGCCTGCGGCTTTTTCAAGCGCGGGGTCACCCTGGTGGTGGTGCGCTCCGAGCTGA
TCGCCGAACGCGCCATCGGAGCGAGCGACACGGGCGCCGTCACCTCGGTGAAGCTGCGCATCCCGACCGGCGAGCCTGAC
CTGTATCAAAAGGCGCTGGAAGGAGAGATCTACTACGGCGACGCCGACCGCGCCGTGCGCGAGACCATGTTCTCCGCCAT
CGGGGCTCCCGCCAGCAGCAGGATCCTCCTGCTTCCGGTCAGGAGTTTCGGCAGGGTCATCGCCGTCATCTACGCCGATT
TCGGCTCCAGCGCCGGGGGCGATCCTCAACTGCAGCTGCTCGAGATCCTCTCCCAGCATGCGGGGCTCATCATAGACAAC
GTGCTCTACCGCAAAAGGTGCGCGCAAAAATAA

Upstream 100 bases:

>100_bases
TGGCAGCCGTAGGGGAGAAGAGCCTTCCCTGGCTCGGTCCCCGAAGGTAAAGCTAACGGTTCTTCAAACCCGCAACACCA
GCCAACACAAGGGTACCTGC

Downstream 100 bases:

>100_bases
GCAGCAAGTTTCGATGTCATCCATTCAGTTACAGGGGGGACCATGGATTCCAAGATCTTCGTCCAAATACTTGAAATAGC
CTTCAGCAAAAAGGTTTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Response Regulator Receiver Domain-Containing Protein; Response Regulator

Number of amino acids: Translated: 570; Mature: 569

Protein sequence:

>570_residues
MSFDGDLEHLPIVDVIQLLHATGKSGTLTLKSAKGESQLAFVDGFVVSANHVNNSVRIGQIMLDMGLITKENLDLALKEQ
RSAGSQRKPIIQTLIEGGVVKTSDAYKGLEALIEMTIVEVLTWTRGTFSLDVNESVVSDDYRYFPEQVKQEIHLNTQNLL
MDALRIYDERKRDGTLTPEAMFGTAEPPMPEAPAGAAEISAVDLGLEELDELERRIPQHFAPLAEELPDTPSNRLRDELT
GIPVEEQQLLFRYLEQLPQPQEGAFAGTGVVLYTTDKVLRECVAAVCGASFLCATDDPSHIDAVLDQALSRQRLPLLLVD
AGEPGDGAALLAFAQQRRERHPDLPIVLLASPGDYALFARAFDVGASAFLPRATRKERAGSFIADAIESCRALAGYLEKR
SEEPGLALLPRFRSSFLALSEQRDPPEVTFALLQAACGFFKRGVTLVVVRSELIAERAIGASDTGAVTSVKLRIPTGEPD
LYQKALEGEIYYGDADRAVRETMFSAIGAPASSRILLLPVRSFGRVIAVIYADFGSSAGGDPQLQLLEILSQHAGLIIDN
VLYRKRCAQK

Sequences:

>Translated_570_residues
MSFDGDLEHLPIVDVIQLLHATGKSGTLTLKSAKGESQLAFVDGFVVSANHVNNSVRIGQIMLDMGLITKENLDLALKEQ
RSAGSQRKPIIQTLIEGGVVKTSDAYKGLEALIEMTIVEVLTWTRGTFSLDVNESVVSDDYRYFPEQVKQEIHLNTQNLL
MDALRIYDERKRDGTLTPEAMFGTAEPPMPEAPAGAAEISAVDLGLEELDELERRIPQHFAPLAEELPDTPSNRLRDELT
GIPVEEQQLLFRYLEQLPQPQEGAFAGTGVVLYTTDKVLRECVAAVCGASFLCATDDPSHIDAVLDQALSRQRLPLLLVD
AGEPGDGAALLAFAQQRRERHPDLPIVLLASPGDYALFARAFDVGASAFLPRATRKERAGSFIADAIESCRALAGYLEKR
SEEPGLALLPRFRSSFLALSEQRDPPEVTFALLQAACGFFKRGVTLVVVRSELIAERAIGASDTGAVTSVKLRIPTGEPD
LYQKALEGEIYYGDADRAVRETMFSAIGAPASSRILLLPVRSFGRVIAVIYADFGSSAGGDPQLQLLEILSQHAGLIIDN
VLYRKRCAQK
>Mature_569_residues
SFDGDLEHLPIVDVIQLLHATGKSGTLTLKSAKGESQLAFVDGFVVSANHVNNSVRIGQIMLDMGLITKENLDLALKEQR
SAGSQRKPIIQTLIEGGVVKTSDAYKGLEALIEMTIVEVLTWTRGTFSLDVNESVVSDDYRYFPEQVKQEIHLNTQNLLM
DALRIYDERKRDGTLTPEAMFGTAEPPMPEAPAGAAEISAVDLGLEELDELERRIPQHFAPLAEELPDTPSNRLRDELTG
IPVEEQQLLFRYLEQLPQPQEGAFAGTGVVLYTTDKVLRECVAAVCGASFLCATDDPSHIDAVLDQALSRQRLPLLLVDA
GEPGDGAALLAFAQQRRERHPDLPIVLLASPGDYALFARAFDVGASAFLPRATRKERAGSFIADAIESCRALAGYLEKRS
EEPGLALLPRFRSSFLALSEQRDPPEVTFALLQAACGFFKRGVTLVVVRSELIAERAIGASDTGAVTSVKLRIPTGEPDL
YQKALEGEIYYGDADRAVRETMFSAIGAPASSRILLLPVRSFGRVIAVIYADFGSSAGGDPQLQLLEILSQHAGLIIDNV
LYRKRCAQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62143; Mature: 62011

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDGDLEHLPIVDVIQLLHATGKSGTLTLKSAKGESQLAFVDGFVVSANHVNNSVRIGQ
CCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCEEEEECCCCCCEEHHH
IMLDMGLITKENLDLALKEQRSAGSQRKPIIQTLIEGGVVKTSDAYKGLEALIEMTIVEV
HHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHH
LTWTRGTFSLDVNESVVSDDYRYFPEQVKQEIHLNTQNLLMDALRIYDERKRDGTLTPEA
HHHCCCEEEEECCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHH
MFGTAEPPMPEAPAGAAEISAVDLGLEELDELERRIPQHFAPLAEELPDTPSNRLRDELT
HCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC
GIPVEEQQLLFRYLEQLPQPQEGAFAGTGVVLYTTDKVLRECVAAVCGASFLCATDDPSH
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCEEEECCCHHH
IDAVLDQALSRQRLPLLLVDAGEPGDGAALLAFAQQRRERHPDLPIVLLASPGDYALFAR
HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHH
AFDVGASAFLPRATRKERAGSFIADAIESCRALAGYLEKRSEEPGLALLPRFRSSFLALS
HHHCCHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH
EQRDPPEVTFALLQAACGFFKRGVTLVVVRSELIAERAIGASDTGAVTSVKLRIPTGEPD
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCEEEEEEEECCCCHH
LYQKALEGEIYYGDADRAVRETMFSAIGAPASSRILLLPVRSFGRVIAVIYADFGSSAGG
HHHHHHCCEEEECCHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHEEEHEEECCCCCCCC
DPQLQLLEILSQHAGLIIDNVLYRKRCAQK
CCHHHHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFDGDLEHLPIVDVIQLLHATGKSGTLTLKSAKGESQLAFVDGFVVSANHVNNSVRIGQ
CCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCEEEEECCCCCCEEHHH
IMLDMGLITKENLDLALKEQRSAGSQRKPIIQTLIEGGVVKTSDAYKGLEALIEMTIVEV
HHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHH
LTWTRGTFSLDVNESVVSDDYRYFPEQVKQEIHLNTQNLLMDALRIYDERKRDGTLTPEA
HHHCCCEEEEECCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHH
MFGTAEPPMPEAPAGAAEISAVDLGLEELDELERRIPQHFAPLAEELPDTPSNRLRDELT
HCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC
GIPVEEQQLLFRYLEQLPQPQEGAFAGTGVVLYTTDKVLRECVAAVCGASFLCATDDPSH
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCEEEECCCHHH
IDAVLDQALSRQRLPLLLVDAGEPGDGAALLAFAQQRRERHPDLPIVLLASPGDYALFAR
HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHH
AFDVGASAFLPRATRKERAGSFIADAIESCRALAGYLEKRSEEPGLALLPRFRSSFLALS
HHHCCHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH
EQRDPPEVTFALLQAACGFFKRGVTLVVVRSELIAERAIGASDTGAVTSVKLRIPTGEPD
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCEEEEEEEECCCCHH
LYQKALEGEIYYGDADRAVRETMFSAIGAPASSRILLLPVRSFGRVIAVIYADFGSSAGG
HHHHHHCCEEEECCHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHEEEHEEECCCCCCCC
DPQLQLLEILSQHAGLIIDNVLYRKRCAQK
CCHHHHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA