| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is rhlE-1 [H]
Identifier: 197116587
GI number: 197116587
Start: 218827
End: 220188
Strand: Reverse
Name: rhlE-1 [H]
Synonym: Gbem_0187
Alternate gene names: 197116587
Gene position: 220188-218827 (Counterclockwise)
Preceding gene: 197116588
Following gene: 197116586
Centisome position: 4.77
GC content: 66.59
Gene sequence:
>1362_bases ATGTCTTTTGAAACTCTGAACCTCTCCGCACCCATCCTCAAAGCAATCCAGGCCTGCGGCTATACGCAGCCCACCCCGAT CCAGGCGGAGTCGATTCCGCTCGCGCTCTCCGGGCGCGACCTGATCGGCAGCGCACAGACCGGGACCGGCAAGACCGCGT CCTTCGTGCTCCCCGCGCTGGAGCGCCTGCTCACCCCGTCGCCGCTGCGCGGCAAGGGCCCGAGGATCCTGGTGCTCACC CCGACCCGCGAACTGGCTATCCAGGTGGTGGACGCAGTGAGAAGCTACGGCAAGTTCATGCGGGTGCGCTGCGGTTCCAT CCTGGGCGGGATGCCCTACCGCGACCAGATGATGCTCCTGGCCCAGCCGGTCGACATCATCGTGGCAACCCCCGGGCGCT TGATCGACCACCTGGACCGCCGCTCCATCAACTTCTCCAGGCTGGAAATGCTGGTGCTGGACGAAGCGGACCGCATGCTG GACATGGGCTTCTCGGAGGACGTGGACCGGATCGCCAACGCGGCCCCCGCCGAGCGCCAGACGCTCCTCTTCACCGCGAC CATGGACGACGCCATGGCGAAACTGGCCCAGCGCCTGCTCAAGGACCCGGTCCGGGTGGCTGTGGAAGGGACGGAAGTCG CCAACCTGCAGATCGAGCAGCGCCTGCACGTCACCGATGACATGCGCCACAAAAACCGCCTGCTGCAGCACCTGGTTTCC GACGCGAGCGTCACCAAGGCGATCATCTTCTCCGCCACCAAAAAGGACGCCGACCAGCTTGCCTTCGAGCTCTACTCCCA GGGTCACGCCGCGGCTGCCTTGCACGGCGACATGTCCCAGGGGGCACGCAACAAGACCATCACCATGATGCGCCGCGGCA AGGTGCGCCTCCTGGTAGCGACGGACGTAGCGGCTCGCGGCCTGGACGTCACCGGCATCAGCCACGTCATCAACTACGAC CTCCCTAAATTCGCCGAGGACTACGTGCACCGCATCGGCAGGACCGGCCGCGCCGGTGCTACCGGCATCGCCATCTCCTT TTGCTCCATGAACGAGGTCGTCTACCTGGACCGCATCGAGCGCTTCACCGGGAAGAAGCTGCCGATGCACGTGGTCGAAG GTTTCGAGCCGACCCGCCCCCTGAGGAGAGGGAACAGCGGTGCGCCCGGCGCGAGGAAGGGGCGTCCTTCCTTCGATCCG CGCAAGAAAGGGTTCGCCCCCAAAGGGCGTTCCGACCAGGGGCGTTCCGACCAGGGGCGTTCGGGATACGCGGGGCGTTC CGGGCAGGGAGCAACGGCCGGCAGGCGCGACAACCAGGTCGTGGTCGAGTACCGCCGCGGCCAGGGCGGCGCCGGGAAAT AG
Upstream 100 bases:
>100_bases ACTTCACCGACCCTTTTGCAAAAAGAGCCGACTGCCGCCCCCGGGGATCTTCGGGCTGCGCCGCCGTGCGCTTTTGCCAA AAAGGGAGCAAAGGAATCAC
Downstream 100 bases:
>100_bases CCCTTTTCCTTGCTTTCAGCAGGTGATTTTGGTATGGTTTGCAGCGAAAAAGGCCCCCGCGGAAGCTTCCACGGGGGCCG CTTGTTCAACAGGGTCAGCT
Product: ATP-dependent RNA helicase RhlE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MSFETLNLSAPILKAIQACGYTQPTPIQAESIPLALSGRDLIGSAQTGTGKTASFVLPALERLLTPSPLRGKGPRILVLT PTRELAIQVVDAVRSYGKFMRVRCGSILGGMPYRDQMMLLAQPVDIIVATPGRLIDHLDRRSINFSRLEMLVLDEADRML DMGFSEDVDRIANAAPAERQTLLFTATMDDAMAKLAQRLLKDPVRVAVEGTEVANLQIEQRLHVTDDMRHKNRLLQHLVS DASVTKAIIFSATKKDADQLAFELYSQGHAAAALHGDMSQGARNKTITMMRRGKVRLLVATDVAARGLDVTGISHVINYD LPKFAEDYVHRIGRTGRAGATGIAISFCSMNEVVYLDRIERFTGKKLPMHVVEGFEPTRPLRRGNSGAPGARKGRPSFDP RKKGFAPKGRSDQGRSDQGRSGYAGRSGQGATAGRRDNQVVVEYRRGQGGAGK
Sequences:
>Translated_453_residues MSFETLNLSAPILKAIQACGYTQPTPIQAESIPLALSGRDLIGSAQTGTGKTASFVLPALERLLTPSPLRGKGPRILVLT PTRELAIQVVDAVRSYGKFMRVRCGSILGGMPYRDQMMLLAQPVDIIVATPGRLIDHLDRRSINFSRLEMLVLDEADRML DMGFSEDVDRIANAAPAERQTLLFTATMDDAMAKLAQRLLKDPVRVAVEGTEVANLQIEQRLHVTDDMRHKNRLLQHLVS DASVTKAIIFSATKKDADQLAFELYSQGHAAAALHGDMSQGARNKTITMMRRGKVRLLVATDVAARGLDVTGISHVINYD LPKFAEDYVHRIGRTGRAGATGIAISFCSMNEVVYLDRIERFTGKKLPMHVVEGFEPTRPLRRGNSGAPGARKGRPSFDP RKKGFAPKGRSDQGRSDQGRSGYAGRSGQGATAGRRDNQVVVEYRRGQGGAGK >Mature_452_residues SFETLNLSAPILKAIQACGYTQPTPIQAESIPLALSGRDLIGSAQTGTGKTASFVLPALERLLTPSPLRGKGPRILVLTP TRELAIQVVDAVRSYGKFMRVRCGSILGGMPYRDQMMLLAQPVDIIVATPGRLIDHLDRRSINFSRLEMLVLDEADRMLD MGFSEDVDRIANAAPAERQTLLFTATMDDAMAKLAQRLLKDPVRVAVEGTEVANLQIEQRLHVTDDMRHKNRLLQHLVSD ASVTKAIIFSATKKDADQLAFELYSQGHAAAALHGDMSQGARNKTITMMRRGKVRLLVATDVAARGLDVTGISHVINYDL PKFAEDYVHRIGRTGRAGATGIAISFCSMNEVVYLDRIERFTGKKLPMHVVEGFEPTRPLRRGNSGAPGARKGRPSFDPR KKGFAPKGRSDQGRSDQGRSGYAGRSGQGATAGRRDNQVVVEYRRGQGGAGK
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI45446747, Length=350, Percent_Identity=42, Blast_Score=281, Evalue=1e-75, Organism=Homo sapiens, GI45446743, Length=350, Percent_Identity=42, Blast_Score=281, Evalue=1e-75, Organism=Homo sapiens, GI20149629, Length=369, Percent_Identity=40.9214092140921, Blast_Score=279, Evalue=4e-75, Organism=Homo sapiens, GI4758138, Length=358, Percent_Identity=41.8994413407821, Blast_Score=276, Evalue=4e-74, Organism=Homo sapiens, GI38201710, Length=473, Percent_Identity=38.2663847780127, Blast_Score=275, Evalue=8e-74, Organism=Homo sapiens, GI148613856, Length=475, Percent_Identity=38.1052631578947, Blast_Score=274, Evalue=1e-73, Organism=Homo sapiens, GI224593278, Length=384, Percent_Identity=40.8854166666667, Blast_Score=270, Evalue=3e-72, Organism=Homo sapiens, GI41327771, Length=382, Percent_Identity=38.7434554973822, Blast_Score=263, Evalue=2e-70, Organism=Homo sapiens, GI41327773, Length=361, Percent_Identity=40.9972299168975, Blast_Score=259, Evalue=3e-69, Organism=Homo sapiens, GI169881239, Length=364, Percent_Identity=40.1098901098901, Blast_Score=258, Evalue=6e-69, Organism=Homo sapiens, GI13514809, Length=364, Percent_Identity=40.1098901098901, Blast_Score=258, Evalue=6e-69, Organism=Homo sapiens, GI222352149, Length=344, Percent_Identity=41.5697674418605, Blast_Score=258, Evalue=7e-69, Organism=Homo sapiens, GI301171467, Length=364, Percent_Identity=39.5604395604396, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI21071032, Length=368, Percent_Identity=40.2173913043478, Blast_Score=254, Evalue=2e-67, Organism=Homo sapiens, GI301171475, Length=364, Percent_Identity=39.5604395604396, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI87196351, Length=364, Percent_Identity=39.5604395604396, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI7661920, Length=375, Percent_Identity=34.9333333333333, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI51094101, Length=370, Percent_Identity=37.2972972972973, Blast_Score=242, Evalue=4e-64, Organism=Homo sapiens, GI164419743, Length=370, Percent_Identity=37.2972972972973, Blast_Score=242, Evalue=4e-64, Organism=Homo sapiens, GI13518015, Length=366, Percent_Identity=37.9781420765027, Blast_Score=242, Evalue=5e-64, Organism=Homo sapiens, GI262231852, Length=366, Percent_Identity=37.9781420765027, Blast_Score=242, Evalue=6e-64, Organism=Homo sapiens, GI216548263, Length=366, Percent_Identity=37.9781420765027, Blast_Score=241, Evalue=8e-64, Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=38.655462184874, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI41327776, Length=370, Percent_Identity=39.1891891891892, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI31542656, Length=395, Percent_Identity=37.9746835443038, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI83700235, Length=376, Percent_Identity=36.7021276595745, Blast_Score=231, Evalue=2e-60, Organism=Homo sapiens, GI55749865, Length=342, Percent_Identity=38.5964912280702, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI164664518, Length=366, Percent_Identity=34.6994535519126, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI188035877, Length=375, Percent_Identity=35.4666666666667, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI50659095, Length=383, Percent_Identity=37.3368146214099, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI4503529, Length=376, Percent_Identity=36.1702127659575, Blast_Score=222, Evalue=4e-58, Organism=Homo sapiens, GI13129006, Length=376, Percent_Identity=36.968085106383, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI13514831, Length=376, Percent_Identity=34.0425531914894, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI256223453, Length=359, Percent_Identity=32.5905292479109, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI8922886, Length=384, Percent_Identity=35.4166666666667, Blast_Score=206, Evalue=2e-53, Organism=Homo sapiens, GI6005743, Length=384, Percent_Identity=35.4166666666667, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI21040371, Length=350, Percent_Identity=32.8571428571429, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI164419732, Length=362, Percent_Identity=34.2541436464088, Blast_Score=199, Evalue=6e-51, Organism=Homo sapiens, GI4758112, Length=350, Percent_Identity=32.2857142857143, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI18375623, Length=350, Percent_Identity=32.2857142857143, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI62241022, Length=366, Percent_Identity=35.2459016393443, Blast_Score=195, Evalue=9e-50, Organism=Homo sapiens, GI17505907, Length=392, Percent_Identity=32.3979591836735, Blast_Score=188, Evalue=9e-48, Organism=Homo sapiens, GI38327634, Length=330, Percent_Identity=35.1515151515151, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI41327779, Length=375, Percent_Identity=34.4, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI62241024, Length=345, Percent_Identity=35.3623188405797, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI38569505, Length=367, Percent_Identity=31.3351498637602, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI38569503, Length=363, Percent_Identity=31.6804407713499, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI9506931, Length=420, Percent_Identity=29.5238095238095, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI4826686, Length=342, Percent_Identity=31.2865497076023, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI256773275, Length=396, Percent_Identity=31.3131313131313, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI154759257, Length=404, Percent_Identity=29.9504950495049, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI20336298, Length=191, Percent_Identity=41.8848167539267, Blast_Score=146, Evalue=5e-35, Organism=Homo sapiens, GI9966805, Length=322, Percent_Identity=29.1925465838509, Blast_Score=129, Evalue=8e-30, Organism=Escherichia coli, GI1787016, Length=379, Percent_Identity=47.4934036939314, Blast_Score=356, Evalue=1e-99, Organism=Escherichia coli, GI87082221, Length=368, Percent_Identity=46.4673913043478, Blast_Score=301, Evalue=7e-83, Organism=Escherichia coli, GI1788930, Length=380, Percent_Identity=42.3684210526316, Blast_Score=296, Evalue=1e-81, Organism=Escherichia coli, GI1787605, Length=353, Percent_Identity=42.7762039660057, Blast_Score=261, Evalue=6e-71, Organism=Escherichia coli, GI1790214, Length=413, Percent_Identity=37.046004842615, Blast_Score=253, Evalue=1e-68, Organism=Escherichia coli, GI48994977, Length=368, Percent_Identity=25.2717391304348, Blast_Score=82, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17555296, Length=424, Percent_Identity=38.9150943396226, Blast_Score=270, Evalue=9e-73, Organism=Caenorhabditis elegans, GI17552642, Length=356, Percent_Identity=40.4494382022472, Blast_Score=260, Evalue=1e-69, Organism=Caenorhabditis elegans, GI17510559, Length=387, Percent_Identity=38.7596899224806, Blast_Score=258, Evalue=5e-69, Organism=Caenorhabditis elegans, GI32565321, Length=387, Percent_Identity=37.2093023255814, Blast_Score=256, Evalue=1e-68, Organism=Caenorhabditis elegans, GI17510307, Length=361, Percent_Identity=39.612188365651, Blast_Score=256, Evalue=2e-68, Organism=Caenorhabditis elegans, GI17510309, Length=361, Percent_Identity=39.612188365651, Blast_Score=256, Evalue=2e-68, Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=39.3939393939394, Blast_Score=255, Evalue=3e-68, Organism=Caenorhabditis elegans, GI115533224, Length=333, Percent_Identity=42.3423423423423, Blast_Score=251, Evalue=4e-67, Organism=Caenorhabditis elegans, GI17507945, Length=383, Percent_Identity=39.9477806788512, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI71995724, Length=375, Percent_Identity=35.4666666666667, Blast_Score=248, Evalue=4e-66, Organism=Caenorhabditis elegans, GI17507121, Length=375, Percent_Identity=35.2, Blast_Score=247, Evalue=7e-66, Organism=Caenorhabditis elegans, GI71987143, Length=367, Percent_Identity=35.6948228882834, Blast_Score=245, Evalue=3e-65, Organism=Caenorhabditis elegans, GI71995718, Length=365, Percent_Identity=40.2739726027397, Blast_Score=244, Evalue=6e-65, Organism=Caenorhabditis elegans, GI86570094, Length=351, Percent_Identity=37.8917378917379, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI17507879, Length=372, Percent_Identity=37.6344086021505, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17507881, Length=379, Percent_Identity=35.8839050131926, Blast_Score=225, Evalue=4e-59, Organism=Caenorhabditis elegans, GI17509811, Length=356, Percent_Identity=38.2022471910112, Blast_Score=224, Evalue=7e-59, Organism=Caenorhabditis elegans, GI17507877, Length=370, Percent_Identity=35.9459459459459, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI71999646, Length=368, Percent_Identity=34.5108695652174, Blast_Score=221, Evalue=4e-58, Organism=Caenorhabditis elegans, GI17537549, Length=375, Percent_Identity=38.4, Blast_Score=221, Evalue=5e-58, Organism=Caenorhabditis elegans, GI71999644, Length=368, Percent_Identity=34.5108695652174, Blast_Score=221, Evalue=6e-58, Organism=Caenorhabditis elegans, GI17552114, Length=361, Percent_Identity=32.6869806094183, Blast_Score=219, Evalue=3e-57, Organism=Caenorhabditis elegans, GI115532548, Length=387, Percent_Identity=32.8165374677003, Blast_Score=205, Evalue=5e-53, Organism=Caenorhabditis elegans, GI115532546, Length=375, Percent_Identity=32.8, Blast_Score=204, Evalue=7e-53, Organism=Caenorhabditis elegans, GI71982858, Length=350, Percent_Identity=32, Blast_Score=194, Evalue=7e-50, Organism=Caenorhabditis elegans, GI17536103, Length=389, Percent_Identity=35.73264781491, Blast_Score=187, Evalue=8e-48, Organism=Caenorhabditis elegans, GI17536101, Length=388, Percent_Identity=35.3092783505155, Blast_Score=187, Evalue=9e-48, Organism=Caenorhabditis elegans, GI17536099, Length=389, Percent_Identity=35.73264781491, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17505370, Length=337, Percent_Identity=34.4213649851632, Blast_Score=186, Evalue=3e-47, Organism=Caenorhabditis elegans, GI71990816, Length=389, Percent_Identity=31.8766066838046, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI193206561, Length=347, Percent_Identity=30.5475504322767, Blast_Score=176, Evalue=3e-44, Organism=Caenorhabditis elegans, GI193208216, Length=383, Percent_Identity=32.3759791122715, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17507641, Length=382, Percent_Identity=32.7225130890052, Blast_Score=168, Evalue=5e-42, Organism=Caenorhabditis elegans, GI17508543, Length=391, Percent_Identity=29.4117647058824, Blast_Score=165, Evalue=4e-41, Organism=Caenorhabditis elegans, GI32564046, Length=369, Percent_Identity=32.520325203252, Blast_Score=159, Evalue=4e-39, Organism=Caenorhabditis elegans, GI17553716, Length=359, Percent_Identity=27.8551532033426, Blast_Score=151, Evalue=5e-37, Organism=Caenorhabditis elegans, GI25148203, Length=419, Percent_Identity=24.582338902148, Blast_Score=151, Evalue=6e-37, Organism=Caenorhabditis elegans, GI17556951, Length=358, Percent_Identity=28.7709497206704, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI25148291, Length=332, Percent_Identity=27.1084337349398, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI71997889, Length=358, Percent_Identity=28.7709497206704, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI71982862, Length=203, Percent_Identity=31.5270935960591, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI25148205, Length=346, Percent_Identity=23.121387283237, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71987152, Length=99, Percent_Identity=44.4444444444444, Blast_Score=97, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6324217, Length=354, Percent_Identity=44.0677966101695, Blast_Score=291, Evalue=2e-79, Organism=Saccharomyces cerevisiae, GI6321856, Length=375, Percent_Identity=42.4, Blast_Score=270, Evalue=3e-73, Organism=Saccharomyces cerevisiae, GI6325138, Length=367, Percent_Identity=41.41689373297, Blast_Score=264, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6323021, Length=353, Percent_Identity=40.2266288951841, Blast_Score=262, Evalue=7e-71, Organism=Saccharomyces cerevisiae, GI6321360, Length=359, Percent_Identity=40.9470752089136, Blast_Score=259, Evalue=5e-70, Organism=Saccharomyces cerevisiae, GI6324778, Length=360, Percent_Identity=40.8333333333333, Blast_Score=257, Evalue=3e-69, Organism=Saccharomyces cerevisiae, GI6320224, Length=372, Percent_Identity=36.5591397849462, Blast_Score=256, Evalue=7e-69, Organism=Saccharomyces cerevisiae, GI6320041, Length=366, Percent_Identity=36.0655737704918, Blast_Score=243, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6322912, Length=365, Percent_Identity=33.972602739726, Blast_Score=217, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6322323, Length=365, Percent_Identity=33.972602739726, Blast_Score=217, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6320449, Length=360, Percent_Identity=38.6111111111111, Blast_Score=216, Evalue=4e-57, Organism=Saccharomyces cerevisiae, GI6324620, Length=373, Percent_Identity=35.3887399463807, Blast_Score=216, Evalue=4e-57, Organism=Saccharomyces cerevisiae, GI6323947, Length=378, Percent_Identity=35.4497354497354, Blast_Score=212, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6322427, Length=369, Percent_Identity=32.7913279132791, Blast_Score=207, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6320173, Length=428, Percent_Identity=31.7757009345794, Blast_Score=202, Evalue=7e-53, Organism=Saccharomyces cerevisiae, GI6320119, Length=385, Percent_Identity=32.4675324675325, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6321963, Length=433, Percent_Identity=34.1801385681293, Blast_Score=201, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6319714, Length=355, Percent_Identity=31.5492957746479, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6321267, Length=374, Percent_Identity=34.2245989304813, Blast_Score=178, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6320400, Length=404, Percent_Identity=30.4455445544554, Blast_Score=176, Evalue=5e-45, Organism=Saccharomyces cerevisiae, GI6319618, Length=412, Percent_Identity=30.3398058252427, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6321111, Length=377, Percent_Identity=31.8302387267904, Blast_Score=172, Evalue=8e-44, Organism=Saccharomyces cerevisiae, GI6323306, Length=415, Percent_Identity=27.4698795180723, Blast_Score=163, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6322876, Length=444, Percent_Identity=27.7027027027027, Blast_Score=129, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6324366, Length=348, Percent_Identity=25, Blast_Score=114, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6321374, Length=373, Percent_Identity=24.6648793565684, Blast_Score=97, Evalue=5e-21, Organism=Drosophila melanogaster, GI24662330, Length=377, Percent_Identity=41.6445623342175, Blast_Score=284, Evalue=7e-77, Organism=Drosophila melanogaster, GI28574962, Length=351, Percent_Identity=43.5897435897436, Blast_Score=276, Evalue=3e-74, Organism=Drosophila melanogaster, GI24644483, Length=356, Percent_Identity=43.2584269662921, Blast_Score=275, Evalue=3e-74, Organism=Drosophila melanogaster, GI24644487, Length=356, Percent_Identity=43.2584269662921, Blast_Score=275, Evalue=3e-74, Organism=Drosophila melanogaster, GI45551833, Length=356, Percent_Identity=43.2584269662921, Blast_Score=275, Evalue=3e-74, Organism=Drosophila melanogaster, GI24644485, Length=356, Percent_Identity=43.2584269662921, Blast_Score=275, Evalue=3e-74, Organism=Drosophila melanogaster, GI24644479, Length=356, Percent_Identity=43.2584269662921, Blast_Score=275, Evalue=3e-74, Organism=Drosophila melanogaster, GI281361218, Length=356, Percent_Identity=43.2584269662921, Blast_Score=275, Evalue=3e-74, Organism=Drosophila melanogaster, GI24644481, Length=356, Percent_Identity=43.2584269662921, Blast_Score=275, Evalue=3e-74, Organism=Drosophila melanogaster, GI21356161, Length=355, Percent_Identity=41.9718309859155, Blast_Score=274, Evalue=7e-74, Organism=Drosophila melanogaster, GI24584399, Length=348, Percent_Identity=41.6666666666667, Blast_Score=270, Evalue=1e-72, Organism=Drosophila melanogaster, GI18857967, Length=360, Percent_Identity=40.2777777777778, Blast_Score=269, Evalue=2e-72, Organism=Drosophila melanogaster, GI24585582, Length=374, Percent_Identity=38.5026737967914, Blast_Score=269, Evalue=3e-72, Organism=Drosophila melanogaster, GI24642151, Length=358, Percent_Identity=40.5027932960894, Blast_Score=262, Evalue=3e-70, Organism=Drosophila melanogaster, GI21355075, Length=353, Percent_Identity=41.643059490085, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=39.6067415730337, Blast_Score=248, Evalue=5e-66, Organism=Drosophila melanogaster, GI24645031, Length=375, Percent_Identity=35.7333333333333, Blast_Score=248, Evalue=6e-66, Organism=Drosophila melanogaster, GI17985987, Length=367, Percent_Identity=40.0544959128065, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI24584994, Length=381, Percent_Identity=37.5328083989501, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI24583279, Length=366, Percent_Identity=33.879781420765, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI24583281, Length=366, Percent_Identity=33.879781420765, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI28575014, Length=372, Percent_Identity=34.4086021505376, Blast_Score=228, Evalue=8e-60, Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=41.6666666666667, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI24582080, Length=375, Percent_Identity=34.6666666666667, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI24582078, Length=375, Percent_Identity=34.6666666666667, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI17136248, Length=375, Percent_Identity=34.6666666666667, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI24582075, Length=375, Percent_Identity=34.6666666666667, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI17136814, Length=377, Percent_Identity=36.0742705570292, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI24642822, Length=375, Percent_Identity=33.6, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI28571808, Length=384, Percent_Identity=32.8125, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI28571809, Length=384, Percent_Identity=32.8125, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI24581954, Length=350, Percent_Identity=32.2857142857143, Blast_Score=188, Evalue=5e-48, Organism=Drosophila melanogaster, GI24581952, Length=350, Percent_Identity=32.2857142857143, Blast_Score=188, Evalue=5e-48, Organism=Drosophila melanogaster, GI24581956, Length=350, Percent_Identity=32.2857142857143, Blast_Score=188, Evalue=5e-48, Organism=Drosophila melanogaster, GI17647335, Length=359, Percent_Identity=32.033426183844, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI21355559, Length=370, Percent_Identity=34.5945945945946, Blast_Score=172, Evalue=5e-43, Organism=Drosophila melanogaster, GI24666101, Length=366, Percent_Identity=32.7868852459016, Blast_Score=169, Evalue=4e-42, Organism=Drosophila melanogaster, GI20130173, Length=442, Percent_Identity=29.6380090497738, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI24643725, Length=394, Percent_Identity=29.4416243654822, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI24668515, Length=333, Percent_Identity=29.7297297297297, Blast_Score=148, Evalue=7e-36, Organism=Drosophila melanogaster, GI24640164, Length=349, Percent_Identity=28.6532951289398, Blast_Score=148, Evalue=7e-36, Organism=Drosophila melanogaster, GI19920478, Length=369, Percent_Identity=29.810298102981, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI17136666, Length=408, Percent_Identity=27.4509803921569, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI28571338, Length=197, Percent_Identity=34.5177664974619, Blast_Score=119, Evalue=6e-27, Organism=Drosophila melanogaster, GI18859659, Length=197, Percent_Identity=34.5177664974619, Blast_Score=119, Evalue=6e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 49414; Mature: 49282
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFETLNLSAPILKAIQACGYTQPTPIQAESIPLALSGRDLIGSAQTGTGKTASFVLPAL CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHH ERLLTPSPLRGKGPRILVLTPTRELAIQVVDAVRSYGKFMRVRCGSILGGMPYRDQMMLL HHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEE AQPVDIIVATPGRLIDHLDRRSINFSRLEMLVLDEADRMLDMGFSEDVDRIANAAPAERQ ECCCEEEEECCHHHHHHHHHCCCCHHHHHEEEHHCHHHHHHCCCHHHHHHHHCCCCCCCE TLLFTATMDDAMAKLAQRLLKDPVRVAVEGTEVANLQIEQRLHVTDDMRHKNRLLQHLVS EEEEEECHHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEEEECCCHHHHHHHHHHHHHHH DASVTKAIIFSATKKDADQLAFELYSQGHAAAALHGDMSQGARNKTITMMRRGKVRLLVA HHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCHHCCCCCCEEEEEECCCEEEEEE TDVAARGLDVTGISHVINYDLPKFAEDYVHRIGRTGRAGATGIAISFCSMNEVVYLDRIE ECHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHH RFTGKKLPMHVVEGFEPTRPLRRGNSGAPGARKGRPSFDPRKKGFAPKGRSDQGRSDQGR HHCCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC SGYAGRSGQGATAGRRDNQVVVEYRRGQGGAGK CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC >Mature Secondary Structure SFETLNLSAPILKAIQACGYTQPTPIQAESIPLALSGRDLIGSAQTGTGKTASFVLPAL CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHH ERLLTPSPLRGKGPRILVLTPTRELAIQVVDAVRSYGKFMRVRCGSILGGMPYRDQMMLL HHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEE AQPVDIIVATPGRLIDHLDRRSINFSRLEMLVLDEADRMLDMGFSEDVDRIANAAPAERQ ECCCEEEEECCHHHHHHHHHCCCCHHHHHEEEHHCHHHHHHCCCHHHHHHHHCCCCCCCE TLLFTATMDDAMAKLAQRLLKDPVRVAVEGTEVANLQIEQRLHVTDDMRHKNRLLQHLVS EEEEEECHHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEEEECCCHHHHHHHHHHHHHHH DASVTKAIIFSATKKDADQLAFELYSQGHAAAALHGDMSQGARNKTITMMRRGKVRLLVA HHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCHHCCCCCCEEEEEECCCEEEEEE TDVAARGLDVTGISHVINYDLPKFAEDYVHRIGRTGRAGATGIAISFCSMNEVVYLDRIE ECHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHH RFTGKKLPMHVVEGFEPTRPLRRGNSGAPGARKGRPSFDPRKKGFAPKGRSDQGRSDQGR HHCCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC SGYAGRSGQGATAGRRDNQVVVEYRRGQGGAGK CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]