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The map label for this gene is aam1 [H]

Identifier: 197116535

GI number: 197116535

Start: 163980

End: 165962

Strand: Direct

Name: aam1 [H]

Synonym: Gbem_0135

Alternate gene names: 197116535

Gene position: 163980-165962 (Clockwise)

Preceding gene: 197116534

Following gene: 197116536

Centisome position: 3.55

GC content: 63.99

Gene sequence:

>1983_bases
ATGGAAGGCAGAGCGCGGATAGCGATAGAGGGGGTCCACCCGCAGATCGATTGTGGCCGGTTCGCCGTGCAGCGGGTAAC
GGGCGACGAGATGGCGGTGCAGGCGGACATCTTCAGCGACGGCCACGAAGAGGTGGTGGCCATGCTGCTCTACCGCCGCC
AGGGGGATGAAGTGTGGCAGGAGACCCAGATGCAGCGCCTGGAGAACGACCGCTGGCAGGGGAGCTTCAAGCTCGGGGAA
CCGGGGTTCTACGAGTACAGCCTCCTCGGCTGGGTGGACCATTTCCGCACCTGGCAGCGCGACCTGCAGAAAAGGTTCGA
GGCGGGGCAGGATGTCTCGGTCGACTTGAAGATCGGCAGCAGCATCCTGTCGCAGGCGGCCAAGGAGGCGAAGGAGCCGG
ACGACGCGAAGCTGCGCCAGGCGGTGGAAGCGCTGAACCAGGAACCGGAGCTGGAAGGGGCGGTGGCGCTCGGACTCGAC
AGCCGGCTTGCCGATCTGGTCAGCACCTGCTGCGCCCGCGGCCTCGCCACCCGCTACCACAAGGATCTTGTGGTCCGGGT
GGACCGGAAAAAGGCGCTCTTCAGCAGCTGGTACGAACTCTTCCCGCGCTCCCTGGGGGGAGCGGAAGGGAGGCACGGCA
CGCTGAAGGACTGCATCGCGATCCTCCCAGACATCGCTGAGCTTGGCTTCGACGTGCTCTATCTCCCCCCCATTCACCCC
ATCGGCACCAGCAAGAGAAAGGGGAAGGCGAACCAGGTCGAGGCGGAGCCCGGGGACCCGGGGAGCCCCTGGGCCATCGG
CTCGCCTGAGGGTGGGCACAAGTCTATACATCCCGAACTGGGAACACTGGAGGATTTCCAGGCCCTGGTCCTCGAAGCGG
ATCGGCACGGCATCGAGATCGCCCTCGACATCGCCTTCCAGTGCTCGCCGGACCACCCCTACCTGAAGGAGCATCCCGAA
TGGTTTCTCTGGAGGCCGGACGGCACGGTCCAGTACGCGGAGAACCCTCCCAAGAAATACCAGGACATCGTCCCGTTCAA
CTTCGAGACGCCGCAGTGGCAGGAGCTTTGGGAGGAGCTGAAGAGCATCTTCTTCTTCTGGATGGACCGGGGGGTGCGCA
TCTTCCGGGTGGACAACCCGCACACGAAGCCCTTTCCCATGTGGGAATGGATCATCGCCAAGGCGAGGGAGAAGGATCCA
AACGTCATCTTCCTCGCCGAGGCGTTCACCAGGCAAAAGATCATGTACCGGCTGGCGAAGCTCGGCTTCTCGCAGTCCTA
CAGCTATTTCGCCTGGCGCAACAGCAAGCGGGAGCTGACCGAGTACCTGACGGAGTTGACCCGAAGCGACGCGAAGGAGT
TCATGCGCCCCAACTTCTGGCCCAACACCCCGGACATCCTGACCGAGTACCTGCAGTACGGGGGCCGTGCCGCTTTCATG
ATCCGGGTGACGCTGGCGGCGACGCTTTCCTCCAACTTCGGCATATACGGCCCGGCGTTCGAGCTCTGCATCCCGACGGC
GGAGGCCGCCGGATCCGAGGAATACAAGGACGCCGAGAAGTACGAGATCCGCCCATGGGACCGCAAGGGGCCCGGGAACA
TCAGGGAGCTGATCTCCAAGCTGAACCGGATCCGGCGCGAGTATTCGGCGCTGCAGGAGACCTGCAACGTGCAGTTCCTG
GAGTCCGACAGCGACAGCGTGCTCTTTTTCGTGAAGACCTCCGGTAAGCCGGGCGCCTCGCTCCTGGTCGCCGTGAACCT
CGACCCTTTCCGGGTCCGCAGCGCGAAACTGCGCCTGCCGCTGGGGCTTCTCGGTGTCCTGTCCGGACAGTCGTACCTGT
TGCACGACCTCTTGAACGGCGAGCGCTCCATCTGGCAGGGGGAGTGGGCCAGCGTAACCCTCGACCCGCAGCTGGCGCCG
GCAGGGATCTTCCGCCTCAGCACCTGGCTCCGCAAGGAATCCGACTTCGATTACTACTTATAG

Upstream 100 bases:

>100_bases
CCGCTGGCGCGGCTCTTCGGGCAGGTGAGCGTGGCGCTCTTGGAGTCCGCCTCCGCGTAAAGCTACGGCGGACAAGCCCG
CTCCGCATAAGGGAGAAGCT

Downstream 100 bases:

>100_bases
CAGGCGGCGATTCTGTCCCGCTAACATCGAGTCCCCCTTGCCCTGTGGAAGCGGCAGGGCGGATCACTCACCTACCTATC
AACGACTCCCCCCTCCACTT

Product: alpha-amylase-like protein

Products: D-Glucose 6-phosphate; D-Glucose [C]

Alternate protein names: NA

Number of amino acids: Translated: 660; Mature: 660

Protein sequence:

>660_residues
MEGRARIAIEGVHPQIDCGRFAVQRVTGDEMAVQADIFSDGHEEVVAMLLYRRQGDEVWQETQMQRLENDRWQGSFKLGE
PGFYEYSLLGWVDHFRTWQRDLQKRFEAGQDVSVDLKIGSSILSQAAKEAKEPDDAKLRQAVEALNQEPELEGAVALGLD
SRLADLVSTCCARGLATRYHKDLVVRVDRKKALFSSWYELFPRSLGGAEGRHGTLKDCIAILPDIAELGFDVLYLPPIHP
IGTSKRKGKANQVEAEPGDPGSPWAIGSPEGGHKSIHPELGTLEDFQALVLEADRHGIEIALDIAFQCSPDHPYLKEHPE
WFLWRPDGTVQYAENPPKKYQDIVPFNFETPQWQELWEELKSIFFFWMDRGVRIFRVDNPHTKPFPMWEWIIAKAREKDP
NVIFLAEAFTRQKIMYRLAKLGFSQSYSYFAWRNSKRELTEYLTELTRSDAKEFMRPNFWPNTPDILTEYLQYGGRAAFM
IRVTLAATLSSNFGIYGPAFELCIPTAEAAGSEEYKDAEKYEIRPWDRKGPGNIRELISKLNRIRREYSALQETCNVQFL
ESDSDSVLFFVKTSGKPGASLLVAVNLDPFRVRSAKLRLPLGLLGVLSGQSYLLHDLLNGERSIWQGEWASVTLDPQLAP
AGIFRLSTWLRKESDFDYYL

Sequences:

>Translated_660_residues
MEGRARIAIEGVHPQIDCGRFAVQRVTGDEMAVQADIFSDGHEEVVAMLLYRRQGDEVWQETQMQRLENDRWQGSFKLGE
PGFYEYSLLGWVDHFRTWQRDLQKRFEAGQDVSVDLKIGSSILSQAAKEAKEPDDAKLRQAVEALNQEPELEGAVALGLD
SRLADLVSTCCARGLATRYHKDLVVRVDRKKALFSSWYELFPRSLGGAEGRHGTLKDCIAILPDIAELGFDVLYLPPIHP
IGTSKRKGKANQVEAEPGDPGSPWAIGSPEGGHKSIHPELGTLEDFQALVLEADRHGIEIALDIAFQCSPDHPYLKEHPE
WFLWRPDGTVQYAENPPKKYQDIVPFNFETPQWQELWEELKSIFFFWMDRGVRIFRVDNPHTKPFPMWEWIIAKAREKDP
NVIFLAEAFTRQKIMYRLAKLGFSQSYSYFAWRNSKRELTEYLTELTRSDAKEFMRPNFWPNTPDILTEYLQYGGRAAFM
IRVTLAATLSSNFGIYGPAFELCIPTAEAAGSEEYKDAEKYEIRPWDRKGPGNIRELISKLNRIRREYSALQETCNVQFL
ESDSDSVLFFVKTSGKPGASLLVAVNLDPFRVRSAKLRLPLGLLGVLSGQSYLLHDLLNGERSIWQGEWASVTLDPQLAP
AGIFRLSTWLRKESDFDYYL
>Mature_660_residues
MEGRARIAIEGVHPQIDCGRFAVQRVTGDEMAVQADIFSDGHEEVVAMLLYRRQGDEVWQETQMQRLENDRWQGSFKLGE
PGFYEYSLLGWVDHFRTWQRDLQKRFEAGQDVSVDLKIGSSILSQAAKEAKEPDDAKLRQAVEALNQEPELEGAVALGLD
SRLADLVSTCCARGLATRYHKDLVVRVDRKKALFSSWYELFPRSLGGAEGRHGTLKDCIAILPDIAELGFDVLYLPPIHP
IGTSKRKGKANQVEAEPGDPGSPWAIGSPEGGHKSIHPELGTLEDFQALVLEADRHGIEIALDIAFQCSPDHPYLKEHPE
WFLWRPDGTVQYAENPPKKYQDIVPFNFETPQWQELWEELKSIFFFWMDRGVRIFRVDNPHTKPFPMWEWIIAKAREKDP
NVIFLAEAFTRQKIMYRLAKLGFSQSYSYFAWRNSKRELTEYLTELTRSDAKEFMRPNFWPNTPDILTEYLQYGGRAAFM
IRVTLAATLSSNFGIYGPAFELCIPTAEAAGSEEYKDAEKYEIRPWDRKGPGNIRELISKLNRIRREYSALQETCNVQFL
ESDSDSVLFFVKTSGKPGASLLVAVNLDPFRVRSAKLRLPLGLLGVLSGQSYLLHDLLNGERSIWQGEWASVTLDPQLAP
AGIFRLSTWLRKESDFDYYL

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family. GlgE subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021828
- InterPro:   IPR006047
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF11896 DUF3416 [H]

EC number: 3.2.1.93 [C]

Molecular weight: Translated: 75359; Mature: 75359

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGRARIAIEGVHPQIDCGRFAVQRVTGDEMAVQADIFSDGHEEVVAMLLYRRQGDEVWQ
CCCCEEEEEECCCCCCCCHHHHHHHCCCCCCEEEEHHHCCCHHHHHHHHHHHHCCHHHHH
ETQMQRLENDRWQGSFKLGEPGFYEYSLLGWVDHFRTWQRDLQKRFEAGQDVSVDLKIGS
HHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCH
SILSQAAKEAKEPDDAKLRQAVEALNQEPELEGAVALGLDSRLADLVSTCCARGLATRYH
HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHC
KDLVVRVDRKKALFSSWYELFPRSLGGAEGRHGTLKDCIAILPDIAELGFDVLYLPPIHP
CCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCC
IGTSKRKGKANQVEAEPGDPGSPWAIGSPEGGHKSIHPELGTLEDFQALVLEADRHGIEI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEE
ALDIAFQCSPDHPYLKEHPEWFLWRPDGTVQYAENPPKKYQDIVPFNFETPQWQELWEEL
EEEEEEEECCCCCHHHCCCCEEEECCCCCEECCCCCCHHHHCCCCCCCCCCCHHHHHHHH
KSIFFFWMDRGVRIFRVDNPHTKPFPMWEWIIAKAREKDPNVIFLAEAFTRQKIMYRLAK
HHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHH
LGFSQSYSYFAWRNSKRELTEYLTELTRSDAKEFMRPNFWPNTPDILTEYLQYGGRAAFM
HCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEE
IRVTLAATLSSNFGIYGPAFELCIPTAEAAGSEEYKDAEKYEIRPWDRKGPGNIRELISK
EEEEHHHHHHCCCCCCCCHHHHEECCHHHCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHH
LNRIRREYSALQETCNVQFLESDSDSVLFFVKTSGKPGASLLVAVNLDPFRVRSAKLRLP
HHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEECCCEECCC
LGLLGVLSGQSYLLHDLLNGERSIWQGEWASVTLDPQLAPAGIFRLSTWLRKESDFDYYL
HHHHHHHCCCHHHHHHHHCCCCCEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEGRARIAIEGVHPQIDCGRFAVQRVTGDEMAVQADIFSDGHEEVVAMLLYRRQGDEVWQ
CCCCEEEEEECCCCCCCCHHHHHHHCCCCCCEEEEHHHCCCHHHHHHHHHHHHCCHHHHH
ETQMQRLENDRWQGSFKLGEPGFYEYSLLGWVDHFRTWQRDLQKRFEAGQDVSVDLKIGS
HHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCH
SILSQAAKEAKEPDDAKLRQAVEALNQEPELEGAVALGLDSRLADLVSTCCARGLATRYH
HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHC
KDLVVRVDRKKALFSSWYELFPRSLGGAEGRHGTLKDCIAILPDIAELGFDVLYLPPIHP
CCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCC
IGTSKRKGKANQVEAEPGDPGSPWAIGSPEGGHKSIHPELGTLEDFQALVLEADRHGIEI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEE
ALDIAFQCSPDHPYLKEHPEWFLWRPDGTVQYAENPPKKYQDIVPFNFETPQWQELWEEL
EEEEEEEECCCCCHHHCCCCEEEECCCCCEECCCCCCHHHHCCCCCCCCCCCHHHHHHHH
KSIFFFWMDRGVRIFRVDNPHTKPFPMWEWIIAKAREKDPNVIFLAEAFTRQKIMYRLAK
HHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHH
LGFSQSYSYFAWRNSKRELTEYLTELTRSDAKEFMRPNFWPNTPDILTEYLQYGGRAAFM
HCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEE
IRVTLAATLSSNFGIYGPAFELCIPTAEAAGSEEYKDAEKYEIRPWDRKGPGNIRELISK
EEEEHHHHHHCCCCCCCCHHHHEECCHHHCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHH
LNRIRREYSALQETCNVQFLESDSDSVLFFVKTSGKPGASLLVAVNLDPFRVRSAKLRLP
HHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEECCCEECCC
LGLLGVLSGQSYLLHDLLNGERSIWQGEWASVTLDPQLAPAGIFRLSTWLRKESDFDYYL
HHHHHHHCCCHHHHHHHHCCCCCEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; alpha,alpha'-Trehalose 6-phosphate [C]

Specific reaction: H2O + alpha,alpha'-Trehalose 6-phosphate --> D-Glucose 6-phosphate + D-Glucose [C]

General reaction: O-Glycosyl bond hydrolysis [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10970853 [H]