Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116515

Identifier: 197116515

GI number: 197116515

Start: 140034

End: 140813

Strand: Reverse

Name: 197116515

Synonym: Gbem_0115

Alternate gene names: NA

Gene position: 140813-140034 (Counterclockwise)

Preceding gene: 197116516

Following gene: 197116514

Centisome position: 3.05

GC content: 68.85

Gene sequence:

>780_bases
TTGGAAATTGAAGGCCTCACTCACCATCTCTGGATCGGATTCGCCGGCGGGCTCGTCGCCTGCGCCCACTGCGTCGGCAT
GTGCGGCGGGTTCGTGCTGCACCTGTCACGGGAAAAGGAGCGCCAGGACATGCTGACAGGGCAGTTCCTGTGGCAGGCCG
GCAGGCTCAGCAGCTATCTCTTCCTGGGCGCGGTCGCCGGTTTCACCGGCGGCTATTTCCAGCTCCTGCTGCTGCGCCAC
GGCCTGTGGCAAAACCTGTTGAGCTACGCGGCGGCGGCAGTCATGTTCCTCATGGGGGCGAGCCTTCTGGGCCTGCTTCC
CTTGCGGGGGGAGGCGAACCGGGGGATGTTTTCCTCGACTCTTTCCGCGCTGGCGGCCAGGCTTTGCACCGATTCCTCTC
CCGGCTCCGCCCTCACCATGGGGATCGTCACCGGCTTTCTTCCCTGCCCCATCGTCGTCGCTTTCCTCGCCTATTCCCTG
CAGACCGGCTCCGTCCTCTCCGGCCTCGCCACCATGGCCGCACTGGCGGCCGGGACCTCGCTGCCGCTTCTCGTACTGGG
GAGCGCGGCGCGGCTCACCCGATGGCACCTGCGCGCCTGGGGGGCACGGGCCGGCGGCGCCGTCCTGCTCCTCTTCGCCC
TGGGAACCGCCCTCCGGGGATCCGCCTTCTACCACAGGCTCCTCGGCTGCCCCCCCACCCCCGGGCCGCAGATAATCAGC
GCCAGCGCTCATTCCGCGACCGGCGCCTGGAGGGGCGATGCCTACGACAGCGGCCGCTAG

Upstream 100 bases:

>100_bases
CCGAGCCCGTTAGCTCTTCTGCACAACCGTTCACCCGGCCTTTGGCCACCCTCGCCCGTGCGGCGAGTTGATTTTTCCCC
TGCTAGGGGAGGAGGGAATC

Downstream 100 bases:

>100_bases
CACCATGGAGCACTATTCTTGCGCGCACTGCGGACTCCCGGTGGCAACCCCCTCGCTTGGGAAAGCCCCCTCTACTCTCG
ACCGGCAGGAGATCTTCTGC

Product: lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MEIEGLTHHLWIGFAGGLVACAHCVGMCGGFVLHLSREKERQDMLTGQFLWQAGRLSSYLFLGAVAGFTGGYFQLLLLRH
GLWQNLLSYAAAAVMFLMGASLLGLLPLRGEANRGMFSSTLSALAARLCTDSSPGSALTMGIVTGFLPCPIVVAFLAYSL
QTGSVLSGLATMAALAAGTSLPLLVLGSAARLTRWHLRAWGARAGGAVLLLFALGTALRGSAFYHRLLGCPPTPGPQIIS
ASAHSATGAWRGDAYDSGR

Sequences:

>Translated_259_residues
MEIEGLTHHLWIGFAGGLVACAHCVGMCGGFVLHLSREKERQDMLTGQFLWQAGRLSSYLFLGAVAGFTGGYFQLLLLRH
GLWQNLLSYAAAAVMFLMGASLLGLLPLRGEANRGMFSSTLSALAARLCTDSSPGSALTMGIVTGFLPCPIVVAFLAYSL
QTGSVLSGLATMAALAAGTSLPLLVLGSAARLTRWHLRAWGARAGGAVLLLFALGTALRGSAFYHRLLGCPPTPGPQIIS
ASAHSATGAWRGDAYDSGR
>Mature_259_residues
MEIEGLTHHLWIGFAGGLVACAHCVGMCGGFVLHLSREKERQDMLTGQFLWQAGRLSSYLFLGAVAGFTGGYFQLLLLRH
GLWQNLLSYAAAAVMFLMGASLLGLLPLRGEANRGMFSSTLSALAARLCTDSSPGSALTMGIVTGFLPCPIVVAFLAYSL
QTGSVLSGLATMAALAAGTSLPLLVLGSAARLTRWHLRAWGARAGGAVLLLFALGTALRGSAFYHRLLGCPPTPGPQIIS
ASAHSATGAWRGDAYDSGR

Specific function: Unknown

COG id: COG2836

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27068; Mature: 27068

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEIEGLTHHLWIGFAGGLVACAHCVGMCGGFVLHLSREKERQDMLTGQFLWQAGRLSSYL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLGAVAGFTGGYFQLLLLRHGLWQNLLSYAAAAVMFLMGASLLGLLPLRGEANRGMFSST
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
LSALAARLCTDSSPGSALTMGIVTGFLPCPIVVAFLAYSLQTGSVLSGLATMAALAAGTS
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
LPLLVLGSAARLTRWHLRAWGARAGGAVLLLFALGTALRGSAFYHRLLGCPPTPGPQIIS
CCHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
ASAHSATGAWRGDAYDSGR
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA