Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 197116510

Identifier: 197116510

GI number: 197116510

Start: 132425

End: 132775

Strand: Direct

Name: 197116510

Synonym: Gbem_0110

Alternate gene names: NA

Gene position: 132425-132775 (Clockwise)

Preceding gene: 197116509

Following gene: 197116511

Centisome position: 2.87

GC content: 61.54

Gene sequence:

>351_bases
ATGAATGTGTCGGTTATCTACAAGGCCAATGTCACAGACGAGGTGCTCGACGCCCTGGCAGGAAAACTCCCGGCCATCAT
CTCCGAGCTTTTGGAGGTGCGCGGCGCCAAGATCGCCATTTTAAAGCCCGAGCAGATCTCGCTGCAGTTCTCGCTGGCGA
ACGTCAGGGACGTCGGCGCTGACCTGAGGATCATCGTCCTGGCCCGCAGCGTCGGCCCGAGGACCTCGGCCGAAAACAAG
CTGGCGACCGCCATCCTGGACAAGGTGCTTCCCCTGGCGGGAGATAAATTCTCCATCGCCATCCGCCTCTACCTGACCGA
AATCGGGGCCGCGGAGTACGCCCCCGCCTAA

Upstream 100 bases:

>100_bases
CATTTACCTGAAAGGGACTACAGCGGTTGCTGTATGTCCCTTTTTCTTTATGCTTTACCGGTGCAGCAATGGACCGTGAA
GACCAAAGGAGGAAAGTAAA

Downstream 100 bases:

>100_bases
AGCAGAAGCGATTCCGTTTCCTGGAAAGCAGAAGGCCACCCGGCTCAAAAGGGTGGCCTTTTCCGTGACCGCCCCCCCAT
TTGCCGGCATTCACTCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MNVSVIYKANVTDEVLDALAGKLPAIISELLEVRGAKIAILKPEQISLQFSLANVRDVGADLRIIVLARSVGPRTSAENK
LATAILDKVLPLAGDKFSIAIRLYLTEIGAAEYAPA

Sequences:

>Translated_116_residues
MNVSVIYKANVTDEVLDALAGKLPAIISELLEVRGAKIAILKPEQISLQFSLANVRDVGADLRIIVLARSVGPRTSAENK
LATAILDKVLPLAGDKFSIAIRLYLTEIGAAEYAPA
>Mature_116_residues
MNVSVIYKANVTDEVLDALAGKLPAIISELLEVRGAKIAILKPEQISLQFSLANVRDVGADLRIIVLARSVGPRTSAENK
LATAILDKVLPLAGDKFSIAIRLYLTEIGAAEYAPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12356; Mature: 12356

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVSVIYKANVTDEVLDALAGKLPAIISELLEVRGAKIAILKPEQISLQFSLANVRDVGA
CCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCHHHCCC
DLRIIVLARSVGPRTSAENKLATAILDKVLPLAGDKFSIAIRLYLTEIGAAEYAPA
CEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MNVSVIYKANVTDEVLDALAGKLPAIISELLEVRGAKIAILKPEQISLQFSLANVRDVGA
CCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCHHHCCC
DLRIIVLARSVGPRTSAENKLATAILDKVLPLAGDKFSIAIRLYLTEIGAAEYAPA
CEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA