Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116503

Identifier: 197116503

GI number: 197116503

Start: 126229

End: 126531

Strand: Direct

Name: 197116503

Synonym: Gbem_0103

Alternate gene names: NA

Gene position: 126229-126531 (Clockwise)

Preceding gene: 197116502

Following gene: 197116504

Centisome position: 2.74

GC content: 61.72

Gene sequence:

>303_bases
ATGTCTGCAATCAAGGAAGAACTCGCCACGAAGATCGACAGCACGGACTGGCTGTCGCTGAGGGCGCACCTGGAAAGAGG
CGGGGTCATCATCGTCGATCCCATGCTGGACCTAGCCGAGGTCGGAGCCGCGGTGGCGAACGACGAGGTCAAAACTGTGG
AGCGCTGGCTGTTGTCGGGGCTTCTCTCCAAGCCGTCAGCGGAGCAGATACAGGCCTGGGATGCCGAAAGCGGCAAGTCG
TTTCTCTGCCTGATCGTCTCCCCCTACGTGCTGGCTCAGGAAGAGCGCCCCGTCAAGGGGTGA

Upstream 100 bases:

>100_bases
CCCGGCTGGAGCAGGAGCTCTCCGAGCTGCGCGAGGAAGTGGCGTCCCTGCGGGAGACTATCGCGGAATTCAGAAAATCG
TTCGAGTAGAGGAGCAACAG

Downstream 100 bases:

>100_bases
CAAAGGAGGCTTCATGGAAAAGGAGCAAGTAGCGGAGGTATCCTGTTCACGCTGCAGCGCCGTCTGGCAGAAAAGCGGCA
CCACTAACTGCTGGAGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MSAIKEELATKIDSTDWLSLRAHLERGGVIIVDPMLDLAEVGAAVANDEVKTVERWLLSGLLSKPSAEQIQAWDAESGKS
FLCLIVSPYVLAQEERPVKG

Sequences:

>Translated_100_residues
MSAIKEELATKIDSTDWLSLRAHLERGGVIIVDPMLDLAEVGAAVANDEVKTVERWLLSGLLSKPSAEQIQAWDAESGKS
FLCLIVSPYVLAQEERPVKG
>Mature_99_residues
SAIKEELATKIDSTDWLSLRAHLERGGVIIVDPMLDLAEVGAAVANDEVKTVERWLLSGLLSKPSAEQIQAWDAESGKSF
LCLIVSPYVLAQEERPVKG

Specific function: Unknown

COG id: COG5626

COG function: function code S; Uncharacterized conserved small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10906; Mature: 10774

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIKEELATKIDSTDWLSLRAHLERGGVIIVDPMLDLAEVGAAVANDEVKTVERWLLSG
CCHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHH
LLSKPSAEQIQAWDAESGKSFLCLIVSPYVLAQEERPVKG
HHCCCCHHHHHHCCCCCCCEEEEEEECCHHHCCCCCCCCC
>Mature Secondary Structure 
SAIKEELATKIDSTDWLSLRAHLERGGVIIVDPMLDLAEVGAAVANDEVKTVERWLLSG
CHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHH
LLSKPSAEQIQAWDAESGKSFLCLIVSPYVLAQEERPVKG
HHCCCCHHHHHHCCCCCCCEEEEEEECCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA