Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116487

Identifier: 197116487

GI number: 197116487

Start: 106490

End: 106708

Strand: Direct

Name: 197116487

Synonym: Gbem_0087

Alternate gene names: NA

Gene position: 106490-106708 (Clockwise)

Preceding gene: 197116485

Following gene: 197116488

Centisome position: 2.31

GC content: 55.71

Gene sequence:

>219_bases
ATGAAGCGGATCATCACTATGGCAGCAGGGTTTTTAGTCGCGCTATCCCTGGCCGCAACGGCGTACGCCGCTCCAAAGGG
AGCGAACGCCCGCAAGAGCTCGCCTGGGATAGAGAACTCGAAAAAGGTGATGCAGTACCGAATGCAGCGGGAAAAGAAGA
TGGAGGACGTGAGGAAGAAAGCGCAGCTCAAAAAGCAGCAGGCCAAGGCCGGAAAATAG

Upstream 100 bases:

>100_bases
GTAATACAAATTGGCAACGGAATCAGAAAGAGGCTCCCGCCAAGGGGGTTGCTTGACTGGTTGTCACACCAGACTCCAAC
GAATTAAGGGGGTAACTGTT

Downstream 100 bases:

>100_bases
CGGCCCAATTTTGCAATTGAACTCGGTAATTTCCGTAGGCAATGGAGGACACTATGAACAGGCTGACGAAAACGCTAATG
GCAGGCCTGGCTATGCTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MKRIITMAAGFLVALSLAATAYAAPKGANARKSSPGIENSKKVMQYRMQREKKMEDVRKKAQLKKQQAKAGK

Sequences:

>Translated_72_residues
MKRIITMAAGFLVALSLAATAYAAPKGANARKSSPGIENSKKVMQYRMQREKKMEDVRKKAQLKKQQAKAGK
>Mature_72_residues
MKRIITMAAGFLVALSLAATAYAAPKGANARKSSPGIENSKKVMQYRMQREKKMEDVRKKAQLKKQQAKAGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7953; Mature: 7953

Theoretical pI: Translated: 11.46; Mature: 11.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIITMAAGFLVALSLAATAYAAPKGANARKSSPGIENSKKVMQYRMQREKKMEDVRKK
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AQLKKQQAKAGK
HHHHHHHHCCCC
>Mature Secondary Structure
MKRIITMAAGFLVALSLAATAYAAPKGANARKSSPGIENSKKVMQYRMQREKKMEDVRKK
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AQLKKQQAKAGK
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA