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The map label for this gene is fnpB [H]

Identifier: 197116422

GI number: 197116422

Start: 29089

End: 29937

Strand: Reverse

Name: fnpB [H]

Synonym: Gbem_0022

Alternate gene names: 197116422

Gene position: 29937-29089 (Counterclockwise)

Preceding gene: 197116423

Following gene: 197116421

Centisome position: 0.65

GC content: 62.78

Gene sequence:

>849_bases
ATGTTCGAAGTCGTAAGCAACGAGATACTAGCGGAAAACCTCCACAAGATGGTGCTGGTGGCACCACGGATCGCGCGCGC
CAGAAAGGCAGGGCAGTTCGTCATGGTCAGGCTGGCGCAAGGCGAGGAGCGCATCCCTTTGACAATCGGTGATGCCGACC
CCGAGGCCGGCACCATCACCCTTTTCATCCAGGCCATAGGCGCCTCAACCCGCAAGATTGTCGACACCCCAGTTGGCGGG
TCCATTCGCGACGTAGCCGGGCCGCTGGGCAAGGAGACGCACATAACCAACTGGGGCCGCGTCGCCTGTGTGGGCGGCGG
CGTCGGCACCGCGGTCCTCTTCCCGCTGGTGAAAGCTCTGGCGGAGGCAGGAAACGAAATCACCACCATCATCGGCGGAC
GCTCCAGCCGCTACGTCATCCTGGCGGAAGAGTTGGGCGCACTCTCGAAAAACCTGCTGATCACGACCGAGGACGGCAGC
CTCGGCTCCAAAGGGTTCGTGACCGGGCCGCTCGGCGAGATGATCGCCGACCCGGCGCGCGCGCCCAAGGCGGTATTTGC
CGTAGGTCCGGTACCGATGATGAAGGCGGTGGCCAACATGACCCGCGAGCCGGGCATCGAGACCATCGTCAGCCTGAACC
CCATCATGATAGACGGCACCGGTATGTGCGGCGGCTGCCGCGTGCAGGTGGGAAGCGAAACCAAGTTCGCCTGCGTTGAC
GGCCCTGAATTCGACGCGCATCTGGTCGATTTCGACGGGCTTTCCGACCGCCTCACCAGCTATCGCAAGGAAGAGGCGCT
AAGGCATGCAGCGACGGATTGCAAGATAGCTAAGGAGGTAGCAAAGTGA

Upstream 100 bases:

>100_bases
CTTTCCGTATACTTCCTTGCGGAATCCCCTCCGTTGTTGATATCGTATTCAATATCGCAACACATCTGCAGCAAATCCCC
TTAGACAAAAGGTGACCCCC

Downstream 100 bases:

>100_bases
GCAACGATTTGTCCCCCAAAGAGAGGATGGCTATAGAGAGGGTCCACATGCCGGAGCTTCCGGCGGACGAGAGAAGCAAG
AATTTCGAAGAGGTGAACCA

Product: ferredoxin-NADP(+) reductase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MFEVVSNEILAENLHKMVLVAPRIARARKAGQFVMVRLAQGEERIPLTIGDADPEAGTITLFIQAIGASTRKIVDTPVGG
SIRDVAGPLGKETHITNWGRVACVGGGVGTAVLFPLVKALAEAGNEITTIIGGRSSRYVILAEELGALSKNLLITTEDGS
LGSKGFVTGPLGEMIADPARAPKAVFAVGPVPMMKAVANMTREPGIETIVSLNPIMIDGTGMCGGCRVQVGSETKFACVD
GPEFDAHLVDFDGLSDRLTSYRKEEALRHAATDCKIAKEVAK

Sequences:

>Translated_282_residues
MFEVVSNEILAENLHKMVLVAPRIARARKAGQFVMVRLAQGEERIPLTIGDADPEAGTITLFIQAIGASTRKIVDTPVGG
SIRDVAGPLGKETHITNWGRVACVGGGVGTAVLFPLVKALAEAGNEITTIIGGRSSRYVILAEELGALSKNLLITTEDGS
LGSKGFVTGPLGEMIADPARAPKAVFAVGPVPMMKAVANMTREPGIETIVSLNPIMIDGTGMCGGCRVQVGSETKFACVD
GPEFDAHLVDFDGLSDRLTSYRKEEALRHAATDCKIAKEVAK
>Mature_282_residues
MFEVVSNEILAENLHKMVLVAPRIARARKAGQFVMVRLAQGEERIPLTIGDADPEAGTITLFIQAIGASTRKIVDTPVGG
SIRDVAGPLGKETHITNWGRVACVGGGVGTAVLFPLVKALAEAGNEITTIIGGRSSRYVILAEELGALSKNLLITTEDGS
LGSKGFVTGPLGEMIADPARAPKAVFAVGPVPMMKAVANMTREPGIETIVSLNPIMIDGTGMCGGCRVQVGSETKFACVD
GPEFDAHLVDFDGLSDRLTSYRKEEALRHAATDCKIAKEVAK

Specific function: Is responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+) [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 29653; Mature: 29653

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEVVSNEILAENLHKMVLVAPRIARARKAGQFVMVRLAQGEERIPLTIGDADPEAGTIT
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCCCEEE
LFIQAIGASTRKIVDTPVGGSIRDVAGPLGKETHITNWGRVACVGGGVGTAVLFPLVKAL
EEEEECCCCCCEEEECCCCCCHHHHHCCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHH
AEAGNEITTIIGGRSSRYVILAEELGALSKNLLITTEDGSLGSKGFVTGPLGEMIADPAR
HHCCCEEEEEECCCCCCEEEEHHHCCCCCCCEEEEECCCCCCCCCCEECCHHHHHCCCCC
APKAVFAVGPVPMMKAVANMTREPGIETIVSLNPIMIDGTGMCGGCRVQVGSETKFACVD
CCCEEEEECCHHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCCCEEEEECCCCEEEEEC
GPEFDAHLVDFDGLSDRLTSYRKEEALRHAATDCKIAKEVAK
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFEVVSNEILAENLHKMVLVAPRIARARKAGQFVMVRLAQGEERIPLTIGDADPEAGTIT
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCCCEEE
LFIQAIGASTRKIVDTPVGGSIRDVAGPLGKETHITNWGRVACVGGGVGTAVLFPLVKAL
EEEEECCCCCCEEEECCCCCCHHHHHCCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHH
AEAGNEITTIIGGRSSRYVILAEELGALSKNLLITTEDGSLGSKGFVTGPLGEMIADPAR
HHCCCEEEEEECCCCCCEEEEHHHCCCCCCCEEEEECCCCCCCCCCEECCHHHHHCCCCC
APKAVFAVGPVPMMKAVANMTREPGIETIVSLNPIMIDGTGMCGGCRVQVGSETKFACVD
CCCEEEEECCHHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCCCEEEEECCCCEEEEEC
GPEFDAHLVDFDGLSDRLTSYRKEEALRHAATDCKIAKEVAK
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]