| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is macA [H]
Identifier: 197116420
GI number: 197116420
Start: 26479
End: 27516
Strand: Reverse
Name: macA [H]
Synonym: Gbem_0020
Alternate gene names: 197116420
Gene position: 27516-26479 (Counterclockwise)
Preceding gene: 197116421
Following gene: NA
Centisome position: 0.6
GC content: 60.21
Gene sequence:
>1038_bases ATGAAAGGCAAATGGATCATACTGCTCCTGCCACTGCTTCCCGGCTGCGTCGATGCCACTGCGAAGGAAACGATGTCCAA GGCCCAGGCCACCTTCAAGCCCATCCCGGCACAGGCCCCGGCCATCAAAGGGAACGAGGCCACCAAGGCCAAGGTCGACC TAGGGAGAATGCTCTTCTTCGATCCCCGCCTCTCCACCTCGCAACTCATCAGCTGCAACACCTGCCATAACGTAGGGTTG GGAGGCGCGGACCTCCAGGAAACCTCGGTCGGCCACGGCTGGCAGAAAGGCCCCCGCAACGCCCCCACCGTTTTCAACGC CGTCTACAACGTAGCCCAGTTCTGGGATGGCAGGGCCAAGGACCTGCAGACCCAGGCCAAGGGCCCGGTGCAGGCGTCCG TAGAGATGAACAGCAATCCCGAGCTGGTAGTTAGAACCTTGAAGAACATCCCGGGATATCCAGCCCTCTTCGAGGCGGCT TTTCCCGGGTACCGCGATCCGGTCACCTTCGACAACATGGCGAAGGCTATCGAGGTGTTCGAGGCGACACTGGTAACTCC GGATGCCCCGTTCGACCACTTCCTCAACGGCGAACCCAGCGCTCTCAACGCGCGCGAGCAGACTGGCCTTGGTGTCTTCA TGGAGAAAGGGTGCGCCGCCTGCCACGGGGGAATCAACATCGGCGGTGCCGCCTACTACCCCTTCGGCGTCCGTGAGATA CCCACTGCAGAGATCCGCCCGGAAAGCGACACGGGGCGTTTCAAGGTGACCAATACCGCCAGCGATAAGTACGTTTTCCG GGCGCCGTCGCTCAGGAACGTCGCGCTCACCCAACCCTATTTCCATTCCGGAAAGGTGTGGAGCCTCAAGGATGCGGTGG TGGTGATGGGGTCTGCGCAACTGGGAATGAAATTGAACGAGACGGAAGTGAACGACACCGTCGCATTCCTAAAGAGCCTG ACGGGAAAACAACCTAAGATTGATTACCCTCTGCTTCCGCCGAGTTCGGACCAGACCCCGCATCCGCAGCTAAAGTGA
Upstream 100 bases:
>100_bases CCTCCATCATCCCATTCCTATTGCCGTTCCGGTTGACACCCCATCTCAAATGAGTATGTTTTAACTCGTCTTCCAATCTA ACCGGTTAATGGAGGCGTAC
Downstream 100 bases:
>100_bases TAGGTGAGATATTGAAGGAGAGGTTTAACTGGAGAGATGAAGAAGATGCGGCACCGGCTTTGCCGCAGTTTGCAAAAGGG CCTGTTTGCCGGCGCGGCTC
Product: cytochrome c
Products: NA
Alternate protein names: CCP; Cytochrome c peroxidase [H]
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MKGKWIILLLPLLPGCVDATAKETMSKAQATFKPIPAQAPAIKGNEATKAKVDLGRMLFFDPRLSTSQLISCNTCHNVGL GGADLQETSVGHGWQKGPRNAPTVFNAVYNVAQFWDGRAKDLQTQAKGPVQASVEMNSNPELVVRTLKNIPGYPALFEAA FPGYRDPVTFDNMAKAIEVFEATLVTPDAPFDHFLNGEPSALNAREQTGLGVFMEKGCAACHGGINIGGAAYYPFGVREI PTAEIRPESDTGRFKVTNTASDKYVFRAPSLRNVALTQPYFHSGKVWSLKDAVVVMGSAQLGMKLNETEVNDTVAFLKSL TGKQPKIDYPLLPPSSDQTPHPQLK
Sequences:
>Translated_345_residues MKGKWIILLLPLLPGCVDATAKETMSKAQATFKPIPAQAPAIKGNEATKAKVDLGRMLFFDPRLSTSQLISCNTCHNVGL GGADLQETSVGHGWQKGPRNAPTVFNAVYNVAQFWDGRAKDLQTQAKGPVQASVEMNSNPELVVRTLKNIPGYPALFEAA FPGYRDPVTFDNMAKAIEVFEATLVTPDAPFDHFLNGEPSALNAREQTGLGVFMEKGCAACHGGINIGGAAYYPFGVREI PTAEIRPESDTGRFKVTNTASDKYVFRAPSLRNVALTQPYFHSGKVWSLKDAVVVMGSAQLGMKLNETEVNDTVAFLKSL TGKQPKIDYPLLPPSSDQTPHPQLK >Mature_345_residues MKGKWIILLLPLLPGCVDATAKETMSKAQATFKPIPAQAPAIKGNEATKAKVDLGRMLFFDPRLSTSQLISCNTCHNVGL GGADLQETSVGHGWQKGPRNAPTVFNAVYNVAQFWDGRAKDLQTQAKGPVQASVEMNSNPELVVRTLKNIPGYPALFEAA FPGYRDPVTFDNMAKAIEVFEATLVTPDAPFDHFLNGEPSALNAREQTGLGVFMEKGCAACHGGINIGGAAYYPFGVREI PTAEIRPESDTGRFKVTNTASDKYVFRAPSLRNVALTQPYFHSGKVWSLKDAVVVMGSAQLGMKLNETEVNDTVAFLKSL TGKQPKIDYPLLPPSSDQTPHPQLK
Specific function: Catalyzes the peroxidative oxidation of azurin and cytochrome c551. Likely to provide protection against toxic peroxides [H]
COG id: COG1858
COG function: function code P; Cytochrome c peroxidase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789935, Length=292, Percent_Identity=43.8356164383562, Blast_Score=228, Evalue=4e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 - InterPro: IPR004852 [H]
Pfam domain/function: PF03150 CCP_MauG; PF00034 Cytochrom_C [H]
EC number: =1.11.1.5 [H]
Molecular weight: Translated: 37349; Mature: 37349
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGKWIILLLPLLPGCVDATAKETMSKAQATFKPIPAQAPAIKGNEATKAKVDLGRMLFF CCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCEEEEE DPRLSTSQLISCNTCHNVGLGGADLQETSVGHGWQKGPRNAPTVFNAVYNVAQFWDGRAK CCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHH DLQTQAKGPVQASVEMNSNPELVVRTLKNIPGYPALFEAAFPGYRDPVTFDNMAKAIEVF HHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHH EATLVTPDAPFDHFLNGEPSALNAREQTGLGVFMEKGCAACHGGINIGGAAYYPFGVREI HHHEECCCCCHHHHCCCCCCCCCCHHHCCCCHHHHCCHHHHCCCCCCCCEEECCCCCCCC PTAEIRPESDTGRFKVTNTASDKYVFRAPSLRNVALTQPYFHSGKVWSLKDAVVVMGSAQ CCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCEEECCCCCCCCCEEEECCEEEEEECHH LGMKLNETEVNDTVAFLKSLTGKQPKIDYPLLPPSSDQTPHPQLK HCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKGKWIILLLPLLPGCVDATAKETMSKAQATFKPIPAQAPAIKGNEATKAKVDLGRMLFF CCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCEEEEE DPRLSTSQLISCNTCHNVGLGGADLQETSVGHGWQKGPRNAPTVFNAVYNVAQFWDGRAK CCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHH DLQTQAKGPVQASVEMNSNPELVVRTLKNIPGYPALFEAAFPGYRDPVTFDNMAKAIEVF HHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHH EATLVTPDAPFDHFLNGEPSALNAREQTGLGVFMEKGCAACHGGINIGGAAYYPFGVREI HHHEECCCCCHHHHCCCCCCCCCCHHHCCCCHHHHCCHHHHCCCCCCCCEEECCCCCCCC PTAEIRPESDTGRFKVTNTASDKYVFRAPSLRNVALTQPYFHSGKVWSLKDAVVVMGSAQ CCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCEEECCCCCCCCCEEEECCEEEEEECHH LGMKLNETEVNDTVAFLKSLTGKQPKIDYPLLPPSSDQTPHPQLK HCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7781769; 10984043; 8543038; 2546794; 3030432; 1657179; 8591033 [H]