Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is macA [H]

Identifier: 197116420

GI number: 197116420

Start: 26479

End: 27516

Strand: Reverse

Name: macA [H]

Synonym: Gbem_0020

Alternate gene names: 197116420

Gene position: 27516-26479 (Counterclockwise)

Preceding gene: 197116421

Following gene: NA

Centisome position: 0.6

GC content: 60.21

Gene sequence:

>1038_bases
ATGAAAGGCAAATGGATCATACTGCTCCTGCCACTGCTTCCCGGCTGCGTCGATGCCACTGCGAAGGAAACGATGTCCAA
GGCCCAGGCCACCTTCAAGCCCATCCCGGCACAGGCCCCGGCCATCAAAGGGAACGAGGCCACCAAGGCCAAGGTCGACC
TAGGGAGAATGCTCTTCTTCGATCCCCGCCTCTCCACCTCGCAACTCATCAGCTGCAACACCTGCCATAACGTAGGGTTG
GGAGGCGCGGACCTCCAGGAAACCTCGGTCGGCCACGGCTGGCAGAAAGGCCCCCGCAACGCCCCCACCGTTTTCAACGC
CGTCTACAACGTAGCCCAGTTCTGGGATGGCAGGGCCAAGGACCTGCAGACCCAGGCCAAGGGCCCGGTGCAGGCGTCCG
TAGAGATGAACAGCAATCCCGAGCTGGTAGTTAGAACCTTGAAGAACATCCCGGGATATCCAGCCCTCTTCGAGGCGGCT
TTTCCCGGGTACCGCGATCCGGTCACCTTCGACAACATGGCGAAGGCTATCGAGGTGTTCGAGGCGACACTGGTAACTCC
GGATGCCCCGTTCGACCACTTCCTCAACGGCGAACCCAGCGCTCTCAACGCGCGCGAGCAGACTGGCCTTGGTGTCTTCA
TGGAGAAAGGGTGCGCCGCCTGCCACGGGGGAATCAACATCGGCGGTGCCGCCTACTACCCCTTCGGCGTCCGTGAGATA
CCCACTGCAGAGATCCGCCCGGAAAGCGACACGGGGCGTTTCAAGGTGACCAATACCGCCAGCGATAAGTACGTTTTCCG
GGCGCCGTCGCTCAGGAACGTCGCGCTCACCCAACCCTATTTCCATTCCGGAAAGGTGTGGAGCCTCAAGGATGCGGTGG
TGGTGATGGGGTCTGCGCAACTGGGAATGAAATTGAACGAGACGGAAGTGAACGACACCGTCGCATTCCTAAAGAGCCTG
ACGGGAAAACAACCTAAGATTGATTACCCTCTGCTTCCGCCGAGTTCGGACCAGACCCCGCATCCGCAGCTAAAGTGA

Upstream 100 bases:

>100_bases
CCTCCATCATCCCATTCCTATTGCCGTTCCGGTTGACACCCCATCTCAAATGAGTATGTTTTAACTCGTCTTCCAATCTA
ACCGGTTAATGGAGGCGTAC

Downstream 100 bases:

>100_bases
TAGGTGAGATATTGAAGGAGAGGTTTAACTGGAGAGATGAAGAAGATGCGGCACCGGCTTTGCCGCAGTTTGCAAAAGGG
CCTGTTTGCCGGCGCGGCTC

Product: cytochrome c

Products: NA

Alternate protein names: CCP; Cytochrome c peroxidase [H]

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MKGKWIILLLPLLPGCVDATAKETMSKAQATFKPIPAQAPAIKGNEATKAKVDLGRMLFFDPRLSTSQLISCNTCHNVGL
GGADLQETSVGHGWQKGPRNAPTVFNAVYNVAQFWDGRAKDLQTQAKGPVQASVEMNSNPELVVRTLKNIPGYPALFEAA
FPGYRDPVTFDNMAKAIEVFEATLVTPDAPFDHFLNGEPSALNAREQTGLGVFMEKGCAACHGGINIGGAAYYPFGVREI
PTAEIRPESDTGRFKVTNTASDKYVFRAPSLRNVALTQPYFHSGKVWSLKDAVVVMGSAQLGMKLNETEVNDTVAFLKSL
TGKQPKIDYPLLPPSSDQTPHPQLK

Sequences:

>Translated_345_residues
MKGKWIILLLPLLPGCVDATAKETMSKAQATFKPIPAQAPAIKGNEATKAKVDLGRMLFFDPRLSTSQLISCNTCHNVGL
GGADLQETSVGHGWQKGPRNAPTVFNAVYNVAQFWDGRAKDLQTQAKGPVQASVEMNSNPELVVRTLKNIPGYPALFEAA
FPGYRDPVTFDNMAKAIEVFEATLVTPDAPFDHFLNGEPSALNAREQTGLGVFMEKGCAACHGGINIGGAAYYPFGVREI
PTAEIRPESDTGRFKVTNTASDKYVFRAPSLRNVALTQPYFHSGKVWSLKDAVVVMGSAQLGMKLNETEVNDTVAFLKSL
TGKQPKIDYPLLPPSSDQTPHPQLK
>Mature_345_residues
MKGKWIILLLPLLPGCVDATAKETMSKAQATFKPIPAQAPAIKGNEATKAKVDLGRMLFFDPRLSTSQLISCNTCHNVGL
GGADLQETSVGHGWQKGPRNAPTVFNAVYNVAQFWDGRAKDLQTQAKGPVQASVEMNSNPELVVRTLKNIPGYPALFEAA
FPGYRDPVTFDNMAKAIEVFEATLVTPDAPFDHFLNGEPSALNAREQTGLGVFMEKGCAACHGGINIGGAAYYPFGVREI
PTAEIRPESDTGRFKVTNTASDKYVFRAPSLRNVALTQPYFHSGKVWSLKDAVVVMGSAQLGMKLNETEVNDTVAFLKSL
TGKQPKIDYPLLPPSSDQTPHPQLK

Specific function: Catalyzes the peroxidative oxidation of azurin and cytochrome c551. Likely to provide protection against toxic peroxides [H]

COG id: COG1858

COG function: function code P; Cytochrome c peroxidase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789935, Length=292, Percent_Identity=43.8356164383562, Blast_Score=228, Evalue=4e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR004852 [H]

Pfam domain/function: PF03150 CCP_MauG; PF00034 Cytochrom_C [H]

EC number: =1.11.1.5 [H]

Molecular weight: Translated: 37349; Mature: 37349

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGKWIILLLPLLPGCVDATAKETMSKAQATFKPIPAQAPAIKGNEATKAKVDLGRMLFF
CCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCEEEEE
DPRLSTSQLISCNTCHNVGLGGADLQETSVGHGWQKGPRNAPTVFNAVYNVAQFWDGRAK
CCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHH
DLQTQAKGPVQASVEMNSNPELVVRTLKNIPGYPALFEAAFPGYRDPVTFDNMAKAIEVF
HHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHH
EATLVTPDAPFDHFLNGEPSALNAREQTGLGVFMEKGCAACHGGINIGGAAYYPFGVREI
HHHEECCCCCHHHHCCCCCCCCCCHHHCCCCHHHHCCHHHHCCCCCCCCEEECCCCCCCC
PTAEIRPESDTGRFKVTNTASDKYVFRAPSLRNVALTQPYFHSGKVWSLKDAVVVMGSAQ
CCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCEEECCCCCCCCCEEEECCEEEEEECHH
LGMKLNETEVNDTVAFLKSLTGKQPKIDYPLLPPSSDQTPHPQLK
HCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKGKWIILLLPLLPGCVDATAKETMSKAQATFKPIPAQAPAIKGNEATKAKVDLGRMLFF
CCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCEEEEE
DPRLSTSQLISCNTCHNVGLGGADLQETSVGHGWQKGPRNAPTVFNAVYNVAQFWDGRAK
CCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHH
DLQTQAKGPVQASVEMNSNPELVVRTLKNIPGYPALFEAAFPGYRDPVTFDNMAKAIEVF
HHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHH
EATLVTPDAPFDHFLNGEPSALNAREQTGLGVFMEKGCAACHGGINIGGAAYYPFGVREI
HHHEECCCCCHHHHCCCCCCCCCCHHHCCCCHHHHCCHHHHCCCCCCCCEEECCCCCCCC
PTAEIRPESDTGRFKVTNTASDKYVFRAPSLRNVALTQPYFHSGKVWSLKDAVVVMGSAQ
CCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCEEECCCCCCCCCEEEECCEEEEEECHH
LGMKLNETEVNDTVAFLKSLTGKQPKIDYPLLPPSSDQTPHPQLK
HCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7781769; 10984043; 8543038; 2546794; 3030432; 1657179; 8591033 [H]