| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is doc
Identifier: 197106353
GI number: 197106353
Start: 3303370
End: 3303765
Strand: Direct
Name: doc
Synonym: PHZ_c2892
Alternate gene names: NA
Gene position: 3303370-3303765 (Clockwise)
Preceding gene: 197106352
Following gene: 197106355
Centisome position: 82.66
GC content: 71.72
Gene sequence:
>396_bases ATGACGGCCGAGCCACGCTGGATCAGCCGCGAGGCGATCCTCGTCCTGCACGACCGCAGCATCGCTCTGCACGGCGGCGC GCAGGGCCTGCGCGACGAGGGGTTGCTGGACTCCGCCCTGGCGCGTCCGCTCAACCGTTTCCATTACGAAGGCGAGACCG ACATCCACGTGCTTGCGGCGACCTATCTCGTCGCGCTGGCGGGCAATCATCCCTTCGCCGACGGCAACAAGCGCGCGGCC TTCCTCGCCGCCGGCCTCTTCCTGCGTCTCAACGGCTGGCGGCTGACGGCCGCCCAGGCCGATGCGGCCCGCACGGTGCT GGCCGTGGCCGCCGGAGACCGCGACCTCGAGCCGCTCGCCGCCTGGCTTCGGCGGTTCTCCGAGCCCTTGCCCTAG
Upstream 100 bases:
>100_bases AGATGCGGATCTCAGCCTACGATCCCTCCGTCGCGGAGGAGATCGCCGCCGGCGAAGCGTTCATGGACGAGTATCGGGAC ACCTTCCGCGCGCTCGCGAA
Downstream 100 bases:
>100_bases CCCGCCAGCGCCCGCGGCAGCTTGAAGGTCACCGTCTCGCGGGCGGTGTCGGCCTCGGTCAGGGTCACCTCGAAGCGTTC GGCCAGGCGGTCCAGCACGC
Product: death on curing protein
Products: NA
Alternate protein names: Death-On-Curing Protein; Death On Curing Protein; Death On Curing xin Protein Doc; Phage Maintenance Killer Protein; Addiction Module xin
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTAEPRWISREAILVLHDRSIALHGGAQGLRDEGLLDSALARPLNRFHYEGETDIHVLAATYLVALAGNHPFADGNKRAA FLAAGLFLRLNGWRLTAAQADAARTVLAVAAGDRDLEPLAAWLRRFSEPLP
Sequences:
>Translated_131_residues MTAEPRWISREAILVLHDRSIALHGGAQGLRDEGLLDSALARPLNRFHYEGETDIHVLAATYLVALAGNHPFADGNKRAA FLAAGLFLRLNGWRLTAAQADAARTVLAVAAGDRDLEPLAAWLRRFSEPLP >Mature_130_residues TAEPRWISREAILVLHDRSIALHGGAQGLRDEGLLDSALARPLNRFHYEGETDIHVLAATYLVALAGNHPFADGNKRAAF LAAGLFLRLNGWRLTAAQADAARTVLAVAAGDRDLEPLAAWLRRFSEPLP
Specific function: Unknown
COG id: COG3654
COG function: function code R; Prophage maintenance system killer protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14260; Mature: 14129
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAEPRWISREAILVLHDRSIALHGGAQGLRDEGLLDSALARPLNRFHYEGETDIHVLAA CCCCCCEECCCEEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHH TYLVALAGNHPFADGNKRAAFLAAGLFLRLNGWRLTAAQADAARTVLAVAAGDRDLEPLA HHHHHHCCCCCCCCCCCCHHHHHHEEEEEECCEEEEECCCCHHHEEEEEECCCCCHHHHH AWLRRFSEPLP HHHHHHCCCCC >Mature Secondary Structure TAEPRWISREAILVLHDRSIALHGGAQGLRDEGLLDSALARPLNRFHYEGETDIHVLAA CCCCCEECCCEEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHH TYLVALAGNHPFADGNKRAAFLAAGLFLRLNGWRLTAAQADAARTVLAVAAGDRDLEPLA HHHHHHCCCCCCCCCCCCHHHHHHEEEEEECCEEEEECCCCHHHEEEEEECCCCCHHHHH AWLRRFSEPLP HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA