Click here to switch to the map view.

The map label for this gene is 197106311

Identifier: 197106311

GI number: 197106311

Start: 3265570

End: 3265965

Strand: Direct

Name: 197106311

Synonym: PHZ_c2850

Alternate gene names: NA

Gene position: 3265570-3265965 (Clockwise)

Preceding gene: 197106310

Following gene: 197106312

Centisome position: 81.72

GC content: 68.18

Gene sequence:

>396_bases
ATGACCGAAGGCTTGGACTACGGAACGACCGAGGACCGCACCATGCCGGCGGTGGCCTACGGGCTCTACCTGCTCGCCTT
CGCGACCGGGGTCACGGCGATCATCGGCCTGATCATCGCCTATGCCCAGCGGGACGGCGCGGGCCCCCGGATGCGCACCC
ACTACACCTTCCTCATCCGCACGTTCTGGATCGGGATCGCCTGGTGCGTGATCGGCGCCCTGCTGTTCGTCGTGGGCGTG
CCGCTCAGCTTCGTCCTGATCGGCCTGCCGCTGGTGTTCGTGGGCTGGGCGATCTTCGCCCTGCTGGGGGTCTGGTACGC
GATCCGCTGCGTGGTGGGCGTCATCTACCTGTCGCGCGGCGAGGCCTATCCGCGGCCCTACACCTGGCTCGCCTAA

Upstream 100 bases:

>100_bases
GATCACCGTGGAGCGGGGCTGAGGCCCGCCCCTTTCGACGAGGCCCTTTCCCTCCCACGTGAATAGGGCATGATCCCCGA
CAGGGACGGAGGGCTTCGCC

Downstream 100 bases:

>100_bases
TCTAGCGCCGGGCCGGGCGCGCGACGTATGGTGAGGGCGTGAACGCGCCCGCCGATCCAAGGCTGATCCTCCGCGAAGAC
GAGCTCGACACCGGGCTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MTEGLDYGTTEDRTMPAVAYGLYLLAFATGVTAIIGLIIAYAQRDGAGPRMRTHYTFLIRTFWIGIAWCVIGALLFVVGV
PLSFVLIGLPLVFVGWAIFALLGVWYAIRCVVGVIYLSRGEAYPRPYTWLA

Sequences:

>Translated_131_residues
MTEGLDYGTTEDRTMPAVAYGLYLLAFATGVTAIIGLIIAYAQRDGAGPRMRTHYTFLIRTFWIGIAWCVIGALLFVVGV
PLSFVLIGLPLVFVGWAIFALLGVWYAIRCVVGVIYLSRGEAYPRPYTWLA
>Mature_130_residues
TEGLDYGTTEDRTMPAVAYGLYLLAFATGVTAIIGLIIAYAQRDGAGPRMRTHYTFLIRTFWIGIAWCVIGALLFVVGVP
LSFVLIGLPLVFVGWAIFALLGVWYAIRCVVGVIYLSRGEAYPRPYTWLA

Specific function: Unknown

COG id: COG3671

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14442; Mature: 14311

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEGLDYGTTEDRTMPAVAYGLYLLAFATGVTAIIGLIIAYAQRDGAGPRMRTHYTFLIR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
TFWIGIAWCVIGALLFVVGVPLSFVLIGLPLVFVGWAIFALLGVWYAIRCVVGVIYLSRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EAYPRPYTWLA
CCCCCCCCCCC
>Mature Secondary Structure 
TEGLDYGTTEDRTMPAVAYGLYLLAFATGVTAIIGLIIAYAQRDGAGPRMRTHYTFLIR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
TFWIGIAWCVIGALLFVVGVPLSFVLIGLPLVFVGWAIFALLGVWYAIRCVVGVIYLSRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EAYPRPYTWLA
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA