| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197106284
Identifier: 197106284
GI number: 197106284
Start: 3238024
End: 3239367
Strand: Direct
Name: 197106284
Synonym: PHZ_c2823
Alternate gene names: NA
Gene position: 3238024-3239367 (Clockwise)
Preceding gene: 197106282
Following gene: 197106285
Centisome position: 81.03
GC content: 71.65
Gene sequence:
>1344_bases ATGCGTCTTCAACTGCTGTGCGGGGCCGCTGCAGCGGCCCTGGCCCTGGCCCTGGCCATGGCCCCGCAAGCCGCCTTCGC CCAGGCCCAGGATGGCGCTGCGCTCGAAGCCCGGGTCCGCCAGCTGGAGGAGGCCCTGGCCGCCGTGAAGGCCGAGCTGG CCGCCTCGCGCGCCGCCGCGGCGGCCGCCCCGCCGCCGGTGGCGCAGATCCCGCAGCCCCAGCCCACCCCCGTCGCCGCC CCGGGCAAGCCGGCCGACGGCTTCCGCATCGGCGACCACGTGGTGAAGTACGGCGGCTTCCTGAAGCTCGACGCCATGGC GACGCAGTACGAGGACGGCGACCTGCCGAACAGCGACCTCGGCCGCGACTTCATCCTGCCGGCCACCATCCCGATCGGCG GACAGGGCGACCAGGACACCCACTTCAACGCCCGCCAGACCCGCGTCTGGCTGACCACCGACGGCGTCGTCGCCGGCCGC AAGGTGGGCACCCGCGTGGAGATGGACTTCCAGACCCTGCCGGGGGCGGGCGACCAGCGGACCACCAGCCCCTCGAACCT GTCGCTGCGCCGGGCCTACATCACCGTCGACAACTGGCTGATCGGCCAGGAGTGGTCGACCTTCCAGAACGTCGGCGTCC TGCCCGAGACCGCCGACTACATCGGCCCCACGGCGGGCACGGTCTTCGTGCGCCAGGCCCAGGTCCGCTACACCAACGGT CCGTTCTCGATCGCGCTGGAGAACCCCGAGACCACCGTCACCCCCTTCCGCGGAGGCGCTCGGATCCTGGCCGACGACTC CGTCATGCCGGACATCGCCGCCAAACTCGAGCTCAGGCGGCCGTTCGGCGACTTCGCCCTGGCCGGGCTGGTCCGCCAGC TGTCCCTGGAGGAGGGGGCCATCGACGACAGCGCGACCGGCTGGGGCGTCTCCTTCTCGGGCAAGGTGAAGGTCGGCTCG CGCGACGACCTGCGCTTCATGGTCACCCACGGCGAGGGGATCGGGCGCTACGTGGGCCTGAACCTCGCCAACGACGCGGT GATCGACGCCGGCGGGAACCTGAAGGCCATCCCGGTCACCGCCGGCTTCGCCGCCTTCCGCCACGTGTGGGCCGACGGCC TGCGCTCGAACCTGATGTACGGTCTCCAGCAGATCGACAACGACACCGCCCTCACGGGCGCGGGGGTCAACGAGAGCTCG CAGAGCGTCCACCTCAACCTGATCTGGACTCCGCTCAAGGGCCTGGACGTCGGCGCCGAGATCATGCGGGCCCGGCGCGA GCTGGAGTCCGGCGCCAAGGGCGACCTCAACCGCATCCAGGCCTTCGCCAAGTACAGCTTCTGA
Upstream 100 bases:
>100_bases CCGGCCGCCCTAGACTTTCGTCTAATCTCGACCAACGGCTAATAGCGCCGCCGCCTTGGGCGCCCCGTGATCTCCCTCAA ATCACACGAGGGGGAAACGC
Downstream 100 bases:
>100_bases GTCCGGAGTTTCCCATGAGCCACGACCAGTCCTTCCCGCCTCCCGCCGCCTGGGCCCGCGACGCCCTGGTGGACCGGCGG CGATACGAGGACCTCGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MRLQLLCGAAAAALALALAMAPQAAFAQAQDGAALEARVRQLEEALAAVKAELAASRAAAAAAPPPVAQIPQPQPTPVAA PGKPADGFRIGDHVVKYGGFLKLDAMATQYEDGDLPNSDLGRDFILPATIPIGGQGDQDTHFNARQTRVWLTTDGVVAGR KVGTRVEMDFQTLPGAGDQRTTSPSNLSLRRAYITVDNWLIGQEWSTFQNVGVLPETADYIGPTAGTVFVRQAQVRYTNG PFSIALENPETTVTPFRGGARILADDSVMPDIAAKLELRRPFGDFALAGLVRQLSLEEGAIDDSATGWGVSFSGKVKVGS RDDLRFMVTHGEGIGRYVGLNLANDAVIDAGGNLKAIPVTAGFAAFRHVWADGLRSNLMYGLQQIDNDTALTGAGVNESS QSVHLNLIWTPLKGLDVGAEIMRARRELESGAKGDLNRIQAFAKYSF
Sequences:
>Translated_447_residues MRLQLLCGAAAAALALALAMAPQAAFAQAQDGAALEARVRQLEEALAAVKAELAASRAAAAAAPPPVAQIPQPQPTPVAA PGKPADGFRIGDHVVKYGGFLKLDAMATQYEDGDLPNSDLGRDFILPATIPIGGQGDQDTHFNARQTRVWLTTDGVVAGR KVGTRVEMDFQTLPGAGDQRTTSPSNLSLRRAYITVDNWLIGQEWSTFQNVGVLPETADYIGPTAGTVFVRQAQVRYTNG PFSIALENPETTVTPFRGGARILADDSVMPDIAAKLELRRPFGDFALAGLVRQLSLEEGAIDDSATGWGVSFSGKVKVGS RDDLRFMVTHGEGIGRYVGLNLANDAVIDAGGNLKAIPVTAGFAAFRHVWADGLRSNLMYGLQQIDNDTALTGAGVNESS QSVHLNLIWTPLKGLDVGAEIMRARRELESGAKGDLNRIQAFAKYSF >Mature_447_residues MRLQLLCGAAAAALALALAMAPQAAFAQAQDGAALEARVRQLEEALAAVKAELAASRAAAAAAPPPVAQIPQPQPTPVAA PGKPADGFRIGDHVVKYGGFLKLDAMATQYEDGDLPNSDLGRDFILPATIPIGGQGDQDTHFNARQTRVWLTTDGVVAGR KVGTRVEMDFQTLPGAGDQRTTSPSNLSLRRAYITVDNWLIGQEWSTFQNVGVLPETADYIGPTAGTVFVRQAQVRYTNG PFSIALENPETTVTPFRGGARILADDSVMPDIAAKLELRRPFGDFALAGLVRQLSLEEGAIDDSATGWGVSFSGKVKVGS RDDLRFMVTHGEGIGRYVGLNLANDAVIDAGGNLKAIPVTAGFAAFRHVWADGLRSNLMYGLQQIDNDTALTGAGVNESS QSVHLNLIWTPLKGLDVGAEIMRARRELESGAKGDLNRIQAFAKYSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47450; Mature: 47450
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLQLLCGAAAAALALALAMAPQAAFAQAQDGAALEARVRQLEEALAAVKAELAASRAAA CEEEEEHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAPPPVAQIPQPQPTPVAAPGKPADGFRIGDHVVKYGGFLKLDAMATQYEDGDLPNSDL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEHHHEECCCCCCCCCCC GRDFILPATIPIGGQGDQDTHFNARQTRVWLTTDGVVAGRKVGTRVEMDFQTLPGAGDQR CCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEECCEEECCCCCCEEEEEHEECCCCCCCC TTSPSNLSLRRAYITVDNWLIGQEWSTFQNVGVLPETADYIGPTAGTVFVRQAQVRYTNG CCCCCCCEEEEEEEEEECEEECCCCHHHHHCCCCCCCHHHCCCCCCEEEEEEEEEEEECC PFSIALENPETTVTPFRGGARILADDSVMPDIAAKLELRRPFGDFALAGLVRQLSLEEGA CEEEEECCCCCEEEECCCCEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC IDDSATGWGVSFSGKVKVGSRDDLRFMVTHGEGIGRYVGLNLANDAVIDAGGNLKAIPVT CCCCCCCCCEEECCEEEECCCCCEEEEEEECCCCCEEEECEECCCEEEECCCCEEEEEEE AGFAAFRHVWADGLRSNLMYGLQQIDNDTALTGAGVNESSQSVHLNLIWTPLKGLDVGAE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCHH IMRARRELESGAKGDLNRIQAFAKYSF HHHHHHHHHCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MRLQLLCGAAAAALALALAMAPQAAFAQAQDGAALEARVRQLEEALAAVKAELAASRAAA CEEEEEHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAPPPVAQIPQPQPTPVAAPGKPADGFRIGDHVVKYGGFLKLDAMATQYEDGDLPNSDL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEHHHEECCCCCCCCCCC GRDFILPATIPIGGQGDQDTHFNARQTRVWLTTDGVVAGRKVGTRVEMDFQTLPGAGDQR CCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEECCEEECCCCCCEEEEEHEECCCCCCCC TTSPSNLSLRRAYITVDNWLIGQEWSTFQNVGVLPETADYIGPTAGTVFVRQAQVRYTNG CCCCCCCEEEEEEEEEECEEECCCCHHHHHCCCCCCCHHHCCCCCCEEEEEEEEEEEECC PFSIALENPETTVTPFRGGARILADDSVMPDIAAKLELRRPFGDFALAGLVRQLSLEEGA CEEEEECCCCCEEEECCCCEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC IDDSATGWGVSFSGKVKVGSRDDLRFMVTHGEGIGRYVGLNLANDAVIDAGGNLKAIPVT CCCCCCCCCEEECCEEEECCCCCEEEEEEECCCCCEEEECEECCCEEEECCCCEEEEEEE AGFAAFRHVWADGLRSNLMYGLQQIDNDTALTGAGVNESSQSVHLNLIWTPLKGLDVGAE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCHH IMRARRELESGAKGDLNRIQAFAKYSF HHHHHHHHHCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA