| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is aroC
Identifier: 197106201
GI number: 197106201
Start: 3141447
End: 3142580
Strand: Direct
Name: aroC
Synonym: PHZ_c2740
Alternate gene names: 197106201
Gene position: 3141447-3142580 (Clockwise)
Preceding gene: 197106200
Following gene: 197106202
Centisome position: 78.61
GC content: 72.31
Gene sequence:
>1134_bases ATGTCGCACAACACCTTCGGCCACCTATTCCGCGTCACCACCTGGGGCGAGAGCCACGGGCCGGCGCTGGGCTGCGTGGT CGACGGCTGCCCGCCGGGCGTCCCGCTGACCGAGGCCGACATCCAGCCCTGGCTCGACCGTCGCCGGCCCGGCCAGGGCA AGTTCGTCACCCAGCGCCAGGAGCCGGACGCGGTCCGCATCCTCTCCGGCGTGTTCCAGGACGAACGGACGACCGCGAAG TTCGGGGGCCAGGTGACCACCGGCACGCCCATCTCGCTGATCATCGAGAACACCGACCAGCGCAGCCGCGACTATTCCGA GATCGCCACCAGCTTCCGACCCGGGCACGCCGACTATCCCTACTTCGCCAAGTACGGGGTCCGCGACTACCGGGGCGGCG GCCGATCCTCGGCCCGCGAGACCGCCGCGCGCGTCGCCGCCGGAGCGATCGCCCGCAAGCTGCTGCCCGGCGTCACCATC CGGGGCGCCGTCGTCCAGATCGGGCCGCATGCGGTGGATCCCGGACGGATCGACTTCTCGGTCACCGGCGACAATCCGTT CTGGGCGCCCGACCCCGAGATCGTCCCGGTCTGGGAGAGGCACCTGGAGCAGGTCCGCAAGGCGGGATCCTCGACCGGCG CCGTGGTCGCCGTGGAGGCAACGGGCGTACCGGCCGGCTGGGGCGCGCCGCTCTACGGCAAGCTGGACGCCGAGCTGGCC GCCGCGCTCATGTCGATCAACGCGGCCAAGGGGGTCGAGATCGGCGCGGGCTTCGCCGCCGCCGCGCTGTCGGGCGAAGA GAACGCCGACGAGATGCGGATGGGGAACGAGGGCCCGCTCTTCCTCTCCAACAAAGCCGGCGGCGTGCTGGGCGGGATCT CCACCGGCCAGCCGGTGACCGCCCGCGTCGCGTTCAAGCCGACCTCCTCCATCCTCACCCCGCGCCGCAGCCTCGACGAG GCGGGCCGCGAGATCGAGCTGCGCACCAAGGGCCGCCACGACCCGTGCGTCGGCATCCGCGCCGTGCCGGTGGTCGAGGC GATGGTCGCCTGCGTCCTCGCCGACGCCTTGTTGCGTCATCGCGCGCAGACCGGCGGCGGCGCCCACGTCTTGGGCGAAA ACCCAAAGTCGTGA
Upstream 100 bases:
>100_bases TCCCTGCTTCGCCGCTTCGCCGCCGCCTGGGCTGCGTAGAGTGGGCCGCGTGAGCGGGCCGTTTGTGGCGCTTCCGGGGT TCGGCTAAGGAAGCCCGGCC
Downstream 100 bases:
>100_bases ACCCGACGTTGCAGACAGTTTCTACGCAACGATAGGTCACTGGACTCAACGGTTTAAAGGATAACCTGTTACAGCAACGC CATTGACCGGCGATTACGGC
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MSHNTFGHLFRVTTWGESHGPALGCVVDGCPPGVPLTEADIQPWLDRRRPGQGKFVTQRQEPDAVRILSGVFQDERTTAK FGGQVTTGTPISLIIENTDQRSRDYSEIATSFRPGHADYPYFAKYGVRDYRGGGRSSARETAARVAAGAIARKLLPGVTI RGAVVQIGPHAVDPGRIDFSVTGDNPFWAPDPEIVPVWERHLEQVRKAGSSTGAVVAVEATGVPAGWGAPLYGKLDAELA AALMSINAAKGVEIGAGFAAAALSGEENADEMRMGNEGPLFLSNKAGGVLGGISTGQPVTARVAFKPTSSILTPRRSLDE AGREIELRTKGRHDPCVGIRAVPVVEAMVACVLADALLRHRAQTGGGAHVLGENPKS
Sequences:
>Translated_377_residues MSHNTFGHLFRVTTWGESHGPALGCVVDGCPPGVPLTEADIQPWLDRRRPGQGKFVTQRQEPDAVRILSGVFQDERTTAK FGGQVTTGTPISLIIENTDQRSRDYSEIATSFRPGHADYPYFAKYGVRDYRGGGRSSARETAARVAAGAIARKLLPGVTI RGAVVQIGPHAVDPGRIDFSVTGDNPFWAPDPEIVPVWERHLEQVRKAGSSTGAVVAVEATGVPAGWGAPLYGKLDAELA AALMSINAAKGVEIGAGFAAAALSGEENADEMRMGNEGPLFLSNKAGGVLGGISTGQPVTARVAFKPTSSILTPRRSLDE AGREIELRTKGRHDPCVGIRAVPVVEAMVACVLADALLRHRAQTGGGAHVLGENPKS >Mature_376_residues SHNTFGHLFRVTTWGESHGPALGCVVDGCPPGVPLTEADIQPWLDRRRPGQGKFVTQRQEPDAVRILSGVFQDERTTAKF GGQVTTGTPISLIIENTDQRSRDYSEIATSFRPGHADYPYFAKYGVRDYRGGGRSSARETAARVAAGAIARKLLPGVTIR GAVVQIGPHAVDPGRIDFSVTGDNPFWAPDPEIVPVWERHLEQVRKAGSSTGAVVAVEATGVPAGWGAPLYGKLDAELAA ALMSINAAKGVEIGAGFAAAALSGEENADEMRMGNEGPLFLSNKAGGVLGGISTGQPVTARVAFKPTSSILTPRRSLDEA GREIELRTKGRHDPCVGIRAVPVVEAMVACVLADALLRHRAQTGGGAHVLGENPKS
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family
Homologues:
Organism=Escherichia coli, GI1788669, Length=367, Percent_Identity=59.1280653950954, Blast_Score=399, Evalue=1e-112, Organism=Saccharomyces cerevisiae, GI6321290, Length=377, Percent_Identity=44.0318302387268, Blast_Score=285, Evalue=9e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROC_PHEZH (B4RHV8)
Other databases:
- EMBL: CP000747 - RefSeq: YP_002131578.1 - ProteinModelPortal: B4RHV8 - GeneID: 6792264 - GenomeReviews: CP000747_GR - KEGG: pzu:PHZ_c2740 - HOGENOM: HBG292336 - OMA: SRFTTQR - ProtClustDB: PRK05382 - HAMAP: MF_00300_B - InterPro: IPR000453 - InterPro: IPR020541 - PANTHER: PTHR21085 - PIRSF: PIRSF001456 - TIGRFAMs: TIGR00033
Pfam domain/function: PF01264 Chorismate_synt; SSF103263 Chorismate_synth
EC number: =4.2.3.5
Molecular weight: Translated: 39781; Mature: 39650
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1; PS00788 CHORISMATE_SYNTHASE_2; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHNTFGHLFRVTTWGESHGPALGCVVDGCPPGVPLTEADIQPWLDRRRPGQGKFVTQRQ CCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCC EPDAVRILSGVFQDERTTAKFGGQVTTGTPISLIIENTDQRSRDYSEIATSFRPGHADYP CCCHHHHHHHHHHCCCHHHHHCCEEECCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCC YFAKYGVRDYRGGGRSSARETAARVAAGAIARKLLPGVTIRGAVVQIGPHAVDPGRIDFS HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCEEEEECCCCCCCCCEEEE VTGDNPFWAPDPEIVPVWERHLEQVRKAGSSTGAVVAVEATGVPAGWGAPLYGKLDAELA EECCCCCCCCCCCEECHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHH AALMSINAAKGVEIGAGFAAAALSGEENADEMRMGNEGPLFLSNKAGGVLGGISTGQPVT HHHHHHHCCCCCEECCCHHHEECCCCCCHHHHHCCCCCCEEEECCCCCEEECCCCCCCEE ARVAFKPTSSILTPRRSLDEAGREIELRTKGRHDPCVGIRAVPVVEAMVACVLADALLRH EEEEECCCHHHCCCHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RAQTGGGAHVLGENPKS HHCCCCCEEECCCCCCC >Mature Secondary Structure SHNTFGHLFRVTTWGESHGPALGCVVDGCPPGVPLTEADIQPWLDRRRPGQGKFVTQRQ CCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCC EPDAVRILSGVFQDERTTAKFGGQVTTGTPISLIIENTDQRSRDYSEIATSFRPGHADYP CCCHHHHHHHHHHCCCHHHHHCCEEECCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCC YFAKYGVRDYRGGGRSSARETAARVAAGAIARKLLPGVTIRGAVVQIGPHAVDPGRIDFS HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCEEEEECCCCCCCCCEEEE VTGDNPFWAPDPEIVPVWERHLEQVRKAGSSTGAVVAVEATGVPAGWGAPLYGKLDAELA EECCCCCCCCCCCEECHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHH AALMSINAAKGVEIGAGFAAAALSGEENADEMRMGNEGPLFLSNKAGGVLGGISTGQPVT HHHHHHHCCCCCEECCCHHHEECCCCCCHHHHHCCCCCCEEEECCCCCEEECCCCCCCEE ARVAFKPTSSILTPRRSLDEAGREIELRTKGRHDPCVGIRAVPVVEAMVACVLADALLRH EEEEECCCHHHCCCHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RAQTGGGAHVLGENPKS HHCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA