| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197106124
Identifier: 197106124
GI number: 197106124
Start: 3053677
End: 3054300
Strand: Direct
Name: 197106124
Synonym: PHZ_c2663
Alternate gene names: NA
Gene position: 3053677-3054300 (Clockwise)
Preceding gene: 197106123
Following gene: 197106127
Centisome position: 76.41
GC content: 72.12
Gene sequence:
>624_bases ATGCAGATCGCAATCCTCACCTTCGACGGGTTCAACGAGCTGGACTCGTTCATCGCCGCGGGGATCCTCAACCGTCTGAA GGGGAAGGGGTGGGCCGCGCACGTCACCTCTCCCACCGAACAGGTGATCTCGATGAACGGGGTGACGGTCCAGCGCCAGC GGCCGCTGGAGTTCGCCCGCGAGGCTGACGCCGTCCTGATCGGCAGCGGGGTGCGCACCCGCGAGATCGCCGCCGACGCC GACCTTCTCGCCCGGATCGCGCTCGACCCGTCGCGCCAGTTGATCGGCGCCCAGTGCTCCGGCACGCTGCTGCTCGCCCG GCTGGGCCTGGTCGGCGACCTGCCGGCGTGCACCGACCTGACGACCAGGCCGTGGGTGGTCGAAGCCGGCGTCGAGGTGA TCGACGCGCCGCTCATGGCCCACGGCAACGTGGCGACGGCGGGCGGCTGCCTGGCCTCGCAGTACCTCGCCGCCTGGATG ATCGCCCGCGGCGCCGGCCTGCGGGAGGCCGAGGAGGCCATCCACTACGTCGCGCCGGTGGGCGAAAAGGCCGCCTATGT CGAGCGTGCGCTGGACGTCGTCAGGCCGTTCGTCGAGCCGGCCGCCGGCGCTCCGGCGGCCTAG
Upstream 100 bases:
>100_bases GCTGTCGCTGCGCTAGGCCGCCGGGCCACTTCCCGTCCGACGGCCCTTTCCCCGCTTCCGAAGCGGGCTACAGCATGGCC CCAGCAGACAGGAAGCCGCC
Downstream 100 bases:
>100_bases CCGCGGCCGTAGATGCGGTCCAGCACCCGGGCGACCTCGACCAGCCGTTCGGCCTGCGGGTCGTAGCGCTCGCCCGCCGC CAGCCGCCGCGCCCAGTCGG
Product: DJ-1/PfpI family protein
Products: NA
Alternate protein names: ThiJ/PfpI Domain-Containing Protein; ThiJ/PfpI Family Protein; ThiJ/PfpI Domain Protein; Transcriptional Regulator; AraC Family Transcription Regulator; Transcriptional Regulator AraC Family; DJ-1/PfpI Family; AraC-Family Transcriptional Regulator; AraC Family Transcriptional Regulator
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MQIAILTFDGFNELDSFIAAGILNRLKGKGWAAHVTSPTEQVISMNGVTVQRQRPLEFAREADAVLIGSGVRTREIAADA DLLARIALDPSRQLIGAQCSGTLLLARLGLVGDLPACTDLTTRPWVVEAGVEVIDAPLMAHGNVATAGGCLASQYLAAWM IARGAGLREAEEAIHYVAPVGEKAAYVERALDVVRPFVEPAAGAPAA
Sequences:
>Translated_207_residues MQIAILTFDGFNELDSFIAAGILNRLKGKGWAAHVTSPTEQVISMNGVTVQRQRPLEFAREADAVLIGSGVRTREIAADA DLLARIALDPSRQLIGAQCSGTLLLARLGLVGDLPACTDLTTRPWVVEAGVEVIDAPLMAHGNVATAGGCLASQYLAAWM IARGAGLREAEEAIHYVAPVGEKAAYVERALDVVRPFVEPAAGAPAA >Mature_207_residues MQIAILTFDGFNELDSFIAAGILNRLKGKGWAAHVTSPTEQVISMNGVTVQRQRPLEFAREADAVLIGSGVRTREIAADA DLLARIALDPSRQLIGAQCSGTLLLARLGLVGDLPACTDLTTRPWVVEAGVEVIDAPLMAHGNVATAGGCLASQYLAAWM IARGAGLREAEEAIHYVAPVGEKAAYVERALDVVRPFVEPAAGAPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21739; Mature: 21739
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIAILTFDGFNELDSFIAAGILNRLKGKGWAAHVTSPTEQVISMNGVTVQRQRPLEFAR CEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCEEEECCCCHHHHH EADAVLIGSGVRTREIAADADLLARIALDPSRQLIGAQCSGTLLLARLGLVGDLPACTDL CCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCC TTRPWVVEAGVEVIDAPLMAHGNVATAGGCLASQYLAAWMIARGAGLREAEEAIHYVAPV CCCCEEEECCHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC GEKAAYVERALDVVRPFVEPAAGAPAA CCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MQIAILTFDGFNELDSFIAAGILNRLKGKGWAAHVTSPTEQVISMNGVTVQRQRPLEFAR CEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCEEEECCCCHHHHH EADAVLIGSGVRTREIAADADLLARIALDPSRQLIGAQCSGTLLLARLGLVGDLPACTDL CCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCC TTRPWVVEAGVEVIDAPLMAHGNVATAGGCLASQYLAAWMIARGAGLREAEEAIHYVAPV CCCCEEEECCHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC GEKAAYVERALDVVRPFVEPAAGAPAA CCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA