| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197106044
Identifier: 197106044
GI number: 197106044
Start: 2968370
End: 2969065
Strand: Direct
Name: 197106044
Synonym: PHZ_c2583
Alternate gene names: NA
Gene position: 2968370-2969065 (Clockwise)
Preceding gene: 197106043
Following gene: 197106049
Centisome position: 74.28
GC content: 69.68
Gene sequence:
>696_bases ATGCGCATCACCACGGTCGGCCTCGATGCCGACGACACGCTCTGGCACAACGAAGGCATCTTCCGCCTGACCCAGGACCG CTTCGTCGCGCTCATGGCGCACCTGGCCGATCCGCAGGACCTGATGGCCAAGCTGCGCGACGTCGAGAAGCGCAACCTGC GGCTCTACGGCTATGGCGTGAAGGGCTTCACGCTCTCGATGATCGAGACGGCGATGGAGCTGACCGGCAACGAGGCGCCC AGCCGGCTGATCGCCGAGATCCTGGCCGCCGGGCGCGAGATGCTGACCCATCCGGTCGAGCCGCTGCCGGGCGTCGAGCA GGCGCTGGCCGACCTCGCCCAGGATTACCGGCTGGTGCTGATCACCAAGGGCGACCTGCTGCACCAGGAGCAGAAGCTGG CGGCCTCGGGCCTCGGCGAACTGTTCGTCGCCGTCGAGATCGTCTCCGAGAAGGACGCGGGCACCTACGAGCGGGTGTTC GCCCGCCACGGCGCGGGCGCAGCCCGGGCCGCCATGTGCGGCAACTCCATGCGCTCGGACATCCTGCCGGCGCTGGAGGC GGGCGCCTATGCGGCCTACGTCCCTTATGAGCTGGTCTGGGAGCACGAGGTCGCCGACGCCCCGGAGAACCACCCGCGCT TTACGGAGCTGTCCAGCCTCGCCGAGCTGCCGGCCTGGCTGCGGGCGCTGACCTAG
Upstream 100 bases:
>100_bases CGGCCCAGGTCGAGCGCGTCCTCAAGGCCCACGCCGCCTGCGCCTGACGGCGCACCGCCCGAGATTGCGCACCGCCGGGG ACGCGCCGTAAGAGCGCGCC
Downstream 100 bases:
>100_bases GGCCGGATCCGGCCCGGCTAGATGCGGCCGAGCGCGCCGCGGGCCGCGATCGGGCCGCTCGGACCCTGGGGATCCGTGGA GCCGCCCGGCGGCTCGACCG
Product: hydrolase, haloacid dehalogenase-like family
Products: NA
Alternate protein names: Haloacid Dehalogenase Domain Protein Hydrolase; HAD Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase Domain-Containing Protein Hydrolase; Hydrolase Haloacid Dehalogenase Family; Haloacid Dehydrogenase Hydrolase; Hydrolase Family Protein; Halogenase-Like Hydrolase; Haloacid Dehalogenase-Like Family Protein; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase Family Hydrolase; Hydrolase Haloacid Dehalogenase Family Protein; HAD Family Phosphatase; Hydrolase Of HAD Superfamily
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MRITTVGLDADDTLWHNEGIFRLTQDRFVALMAHLADPQDLMAKLRDVEKRNLRLYGYGVKGFTLSMIETAMELTGNEAP SRLIAEILAAGREMLTHPVEPLPGVEQALADLAQDYRLVLITKGDLLHQEQKLAASGLGELFVAVEIVSEKDAGTYERVF ARHGAGAARAAMCGNSMRSDILPALEAGAYAAYVPYELVWEHEVADAPENHPRFTELSSLAELPAWLRALT
Sequences:
>Translated_231_residues MRITTVGLDADDTLWHNEGIFRLTQDRFVALMAHLADPQDLMAKLRDVEKRNLRLYGYGVKGFTLSMIETAMELTGNEAP SRLIAEILAAGREMLTHPVEPLPGVEQALADLAQDYRLVLITKGDLLHQEQKLAASGLGELFVAVEIVSEKDAGTYERVF ARHGAGAARAAMCGNSMRSDILPALEAGAYAAYVPYELVWEHEVADAPENHPRFTELSSLAELPAWLRALT >Mature_231_residues MRITTVGLDADDTLWHNEGIFRLTQDRFVALMAHLADPQDLMAKLRDVEKRNLRLYGYGVKGFTLSMIETAMELTGNEAP SRLIAEILAAGREMLTHPVEPLPGVEQALADLAQDYRLVLITKGDLLHQEQKLAASGLGELFVAVEIVSEKDAGTYERVF ARHGAGAARAAMCGNSMRSDILPALEAGAYAAYVPYELVWEHEVADAPENHPRFTELSSLAELPAWLRALT
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25427; Mature: 25427
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRITTVGLDADDTLWHNEGIFRLTQDRFVALMAHLADPQDLMAKLRDVEKRNLRLYGYGV CEEEEECCCCCCCEECCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEECC KGFTLSMIETAMELTGNEAPSRLIAEILAAGREMLTHPVEPLPGVEQALADLAQDYRLVL CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEE ITKGDLLHQEQKLAASGLGELFVAVEIVSEKDAGTYERVFARHGAGAARAAMCGNSMRSD EECCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHCCHHHHH ILPALEAGAYAAYVPYELVWEHEVADAPENHPRFTELSSLAELPAWLRALT HHHHHHCCCEEEECCHHHEECCHHCCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRITTVGLDADDTLWHNEGIFRLTQDRFVALMAHLADPQDLMAKLRDVEKRNLRLYGYGV CEEEEECCCCCCCEECCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEECC KGFTLSMIETAMELTGNEAPSRLIAEILAAGREMLTHPVEPLPGVEQALADLAQDYRLVL CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEE ITKGDLLHQEQKLAASGLGELFVAVEIVSEKDAGTYERVFARHGAGAARAAMCGNSMRSD EECCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHCCHHHHH ILPALEAGAYAAYVPYELVWEHEVADAPENHPRFTELSSLAELPAWLRALT HHHHHHCCCEEEECCHHHEECCHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA