| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105986
Identifier: 197105986
GI number: 197105986
Start: 2898474
End: 2899679
Strand: Reverse
Name: 197105986
Synonym: PHZ_c2525
Alternate gene names: NA
Gene position: 2899679-2898474 (Counterclockwise)
Preceding gene: 197105987
Following gene: 197105985
Centisome position: 72.56
GC content: 69.32
Gene sequence:
>1206_bases ATGGCGAGCGGCATCAAGGACCGGGTTGCGATCCTGGGTATGGGCTGCGCCCGCTTCGGTGAGCGCTGGAACGACGACGC CGAGACCCTGATGGTGGAGGCCTTCGACGAGGCCATCGCCGATGCGGGCATCGACGTTTCCCAGATCGACGCGGCGTGGC TGTCCGTGGGCTTCGACGCCCAGAACATCGGCCCCAGCGGCATCCCGCTGGCGATGGCGCTGAGGTTGCCGAACATCGGG GTGACCAAGGTCGAGAACTACTGCGCCTCGGGCACCGACGGCTTCCGTGGCGCGGTCTACGCCGTGGCCTCGGGGGCCTG CGACATCGCGCTGGCTGTTGGCGTCGAGAAGCTGAAGGACACCGGATACGGCGGCCTGCCCGTGCGCACCCGGGGCACGA CCTACGACATGGTCAATGTGACGGGCTCTGCGCCGGGCTTCTTCGCCCAGCTGGCCGGCGCCTACCGGGCCAAGCACGGC GTCGGCTACGACGACCTGAAGCGGGCCATGGCCCACGTCTCGGTGAAGAGCCACGCGAACGGCGCCAGGAACCCCAAGGC GCACCTGCGCAAGCCGATCACCGAGGAGCAGGCGCTCAACGCGCCGATGATCGCCGCGCCGCTGGGCCTCTTCGACTGCT GCGGCGTGTCGGACGGCGCGGCCTGCGCCATCGTGACGACGCCCGAGATCGCCCGGGCGCTCGGCAAGACCGACCTCGTG ACCGTCAAGGCGCTGCAGATTTCCACCTCCAACGGCTGGGAGCTGCAGGGCGGCGGCTGGGACGGCAGCTACTTCCACAC CACGCGGATCGCGGCCCAGAAGGCCTATGCCGAAGCCGGCGTCACCGACCCGCGCAAGCAGCTGTCCCTGACGGAGGTGC ACGACTGCTTCTCGGTCACCGAGCTGGTGACGATGGAGGACCTGGGGCTCTCCGCGGAGGGCGAGGCCTGGAAGGACGTG CTGGACGGGGTGTTCGACGCCGACGGCCAGATTCCCTGCCAGATCGACGGCGGCCTGAAGTGCTTCGGCCACCCCATCGG CGCCTCGGGTCTTCGGATGATCTACGAGAACTATCTGCAGCTGCTTGGCCGCGCCGGCGAACGCCAGCGCAAGGACCCGC CCTCGCTGGCGCTTTCCCACAACCTCGGCGGCATGCCGAGCCAGAACGTCAGCGCGGTGGCCATCGTGGGCCTGGAAGGC GCCTGA
Upstream 100 bases:
>100_bases TCGACGATCGGCGGGGCTTCACGAAGTACTTCTGGAAAGCGGTCCCGGACTACCTGGCGGGCAACCCCGCGCAGCTGGCG GCGGAATAGGAGCGAAGGTC
Downstream 100 bases:
>100_bases TGGACGCGGACACCCTGGGACAGTTCCGCGAGACGGTTTGGCGCTACGTCCGCGAGAAGCTCGTTCCGCTGGAGGCCGAG GTCGCCGAGCGTGACGAGGT
Product: acetyl-CoA acetyltransferase
Products: CoA; 3-oxoacyl-CoA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MASGIKDRVAILGMGCARFGERWNDDAETLMVEAFDEAIADAGIDVSQIDAAWLSVGFDAQNIGPSGIPLAMALRLPNIG VTKVENYCASGTDGFRGAVYAVASGACDIALAVGVEKLKDTGYGGLPVRTRGTTYDMVNVTGSAPGFFAQLAGAYRAKHG VGYDDLKRAMAHVSVKSHANGARNPKAHLRKPITEEQALNAPMIAAPLGLFDCCGVSDGAACAIVTTPEIARALGKTDLV TVKALQISTSNGWELQGGGWDGSYFHTTRIAAQKAYAEAGVTDPRKQLSLTEVHDCFSVTELVTMEDLGLSAEGEAWKDV LDGVFDADGQIPCQIDGGLKCFGHPIGASGLRMIYENYLQLLGRAGERQRKDPPSLALSHNLGGMPSQNVSAVAIVGLEG A
Sequences:
>Translated_401_residues MASGIKDRVAILGMGCARFGERWNDDAETLMVEAFDEAIADAGIDVSQIDAAWLSVGFDAQNIGPSGIPLAMALRLPNIG VTKVENYCASGTDGFRGAVYAVASGACDIALAVGVEKLKDTGYGGLPVRTRGTTYDMVNVTGSAPGFFAQLAGAYRAKHG VGYDDLKRAMAHVSVKSHANGARNPKAHLRKPITEEQALNAPMIAAPLGLFDCCGVSDGAACAIVTTPEIARALGKTDLV TVKALQISTSNGWELQGGGWDGSYFHTTRIAAQKAYAEAGVTDPRKQLSLTEVHDCFSVTELVTMEDLGLSAEGEAWKDV LDGVFDADGQIPCQIDGGLKCFGHPIGASGLRMIYENYLQLLGRAGERQRKDPPSLALSHNLGGMPSQNVSAVAIVGLEG A >Mature_400_residues ASGIKDRVAILGMGCARFGERWNDDAETLMVEAFDEAIADAGIDVSQIDAAWLSVGFDAQNIGPSGIPLAMALRLPNIGV TKVENYCASGTDGFRGAVYAVASGACDIALAVGVEKLKDTGYGGLPVRTRGTTYDMVNVTGSAPGFFAQLAGAYRAKHGV GYDDLKRAMAHVSVKSHANGARNPKAHLRKPITEEQALNAPMIAAPLGLFDCCGVSDGAACAIVTTPEIARALGKTDLVT VKALQISTSNGWELQGGGWDGSYFHTTRIAAQKAYAEAGVTDPRKQLSLTEVHDCFSVTELVTMEDLGLSAEGEAWKDVL DGVFDADGQIPCQIDGGLKCFGHPIGASGLRMIYENYLQLLGRAGERQRKDPPSLALSHNLGGMPSQNVSAVAIVGLEGA
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19923233, Length=391, Percent_Identity=29.923273657289, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI302344760, Length=391, Percent_Identity=28.1329923273657, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI302344767, Length=317, Percent_Identity=29.9684542586751, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI302344762, Length=391, Percent_Identity=27.8772378516624, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI55956775, Length=358, Percent_Identity=26.2569832402235, Blast_Score=79, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17537653, Length=392, Percent_Identity=27.2959183673469, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI19921506, Length=395, Percent_Identity=28.1012658227848, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI24585051, Length=396, Percent_Identity=28.5353535353535, Blast_Score=130, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: 2.3.1.16
Molecular weight: Translated: 42019; Mature: 41888
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASGIKDRVAILGMGCARFGERWNDDAETLMVEAFDEAIADAGIDVSQIDAAWLSVGFDA CCCCHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC QNIGPSGIPLAMALRLPNIGVTKVENYCASGTDGFRGAVYAVASGACDIALAVGVEKLKD CCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCHHEEEEECCCCHHHHHHHHHHHHH TGYGGLPVRTRGTTYDMVNVTGSAPGFFAQLAGAYRAKHGVGYDDLKRAMAHVSVKSHAN CCCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC GARNPKAHLRKPITEEQALNAPMIAAPLGLFDCCGVSDGAACAIVTTPEIARALGKTDLV CCCCCHHHHHCCCCHHHHCCCCHHHHCCCHHHHCCCCCCCEEEEEECHHHHHHHCCCCEE TVKALQISTSNGWELQGGGWDGSYFHTTRIAAQKAYAEAGVTDPRKQLSLTEVHDCFSVT EEEEEEEECCCCEEECCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHH ELVTMEDLGLSAEGEAWKDVLDGVFDADGQIPCQIDGGLKCFGHPIGASGLRMIYENYLQ HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHH LLGRAGERQRKDPPSLALSHNLGGMPSQNVSAVAIVGLEGA HHHCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure ASGIKDRVAILGMGCARFGERWNDDAETLMVEAFDEAIADAGIDVSQIDAAWLSVGFDA CCCHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC QNIGPSGIPLAMALRLPNIGVTKVENYCASGTDGFRGAVYAVASGACDIALAVGVEKLKD CCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCHHEEEEECCCCHHHHHHHHHHHHH TGYGGLPVRTRGTTYDMVNVTGSAPGFFAQLAGAYRAKHGVGYDDLKRAMAHVSVKSHAN CCCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC GARNPKAHLRKPITEEQALNAPMIAAPLGLFDCCGVSDGAACAIVTTPEIARALGKTDLV CCCCCHHHHHCCCCHHHHCCCCHHHHCCCHHHHCCCCCCCEEEEEECHHHHHHHCCCCEE TVKALQISTSNGWELQGGGWDGSYFHTTRIAAQKAYAEAGVTDPRKQLSLTEVHDCFSVT EEEEEEEECCCCEEECCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHH ELVTMEDLGLSAEGEAWKDVLDGVFDADGQIPCQIDGGLKCFGHPIGASGLRMIYENYLQ HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHH LLGRAGERQRKDPPSLALSHNLGGMPSQNVSAVAIVGLEGA HHHCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA; acetyl-CoA
Specific reaction: acyl-CoA + acetyl-CoA = CoA + 3-oxoacyl-CoA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]