| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105979
Identifier: 197105979
GI number: 197105979
Start: 2890062
End: 2891060
Strand: Reverse
Name: 197105979
Synonym: PHZ_c2518
Alternate gene names: NA
Gene position: 2891060-2890062 (Counterclockwise)
Preceding gene: 197105980
Following gene: 197105978
Centisome position: 72.34
GC content: 69.27
Gene sequence:
>999_bases ATGGCGCTCAAGACCCGTTTCACCGAGACCTTCGGGGTCGAGCACCCCATCGTGCAGGGGGGCATGCAGTGGGTCGGCCG GGCCGAGCTGGTGGCGGCGGTGGCCAACGCCGGCGGCCTGGGCTTCATCACCGCGCTGACGCAGCCGACGCCGGACGACC TGCGCCGCGAGATCGAGCGCTGCCAGAAGCTGACGGACAAGCCGTTCGGGGTGAATCTGACGATCCTGCCGGCGATCACG CCGCCGCCGTACGCCGAGTACCGGCAGGCGATCATCGACTCGGGGGTGAAGATCGTCGAGACGGCCGGCTACAAGCCGCA GGAGCACGTCGACCACTTCAAGGAGCACGGGATCAAGGTGATCCACAAGTGCACGGCGGTCCGCCACGCGCTGTCGGCCG AGCGGATGGGCGTGGACGCGATCTCCATCGACGGCTTCGAGTGCGCGGGCCATCCGGGCGAGGACGACATCCCGGGCCTG ATCCTGATCCCGGCGGCGGCCGACAAGGTGAAGATCCCGATGATCGCCTCGGGCGGCTTCGGCGACGCGCGCGGCCTGGT GGCGGCCCTGGCGCTGGGCGCCGACGGGGTGAACATGGGCACGCGCTTCATGTGCACCGCCGAGAGCCCGATCCACCAGA AGGTGAAGGAGCAGATCGTCGCCAACGACGAGCGGCAGACCAACCTGATCTTCCGCACGATGCACAACACCGCACGGGTG GCGAAGAACGCGGTCTCGGACGAGGTGGTGGCCATAGAGCGGCGCGGCGGGGCCAAGTTCGAGGACGTGAAGGACCTGGT GGCCGGCGCCCGCGGCAAGGTGGTCTACGAGCAGGGCGACCCGGACTACGGCATCTGGTCGGCGGGCATGGTCCAGGGCC TGATCCACGACATCCCGACCTGCGCCGAACTGATCCACCGCATGGTCCGCGAGGCCGAGGAGATCATCGAGGCGCGCCTG GCCCGCATGGTCGGCCACAAGAGCCTGCAGCCGGCCTGA
Upstream 100 bases:
>100_bases GAACCGCGCTGCTCAGGTGGAAGCGCTCTACGCCGCCGAGCGTGGGCCGGACCTGATCATCGCACCGGAATTGACGGCCT AGCCGGCCGCAGGAGGACCC
Downstream 100 bases:
>100_bases GCCGACACCACACCGTCCTGAAAACAAGAGAGCCGCCGGGTCGCTCCGGCGGCTCTTTCGCTCTCCACGACCGCCGTTGC GCAGGACGGGGATTTCGGCT
Product: 2-nitropropane_dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MALKTRFTETFGVEHPIVQGGMQWVGRAELVAAVANAGGLGFITALTQPTPDDLRREIERCQKLTDKPFGVNLTILPAIT PPPYAEYRQAIIDSGVKIVETAGYKPQEHVDHFKEHGIKVIHKCTAVRHALSAERMGVDAISIDGFECAGHPGEDDIPGL ILIPAAADKVKIPMIASGGFGDARGLVAALALGADGVNMGTRFMCTAESPIHQKVKEQIVANDERQTNLIFRTMHNTARV AKNAVSDEVVAIERRGGAKFEDVKDLVAGARGKVVYEQGDPDYGIWSAGMVQGLIHDIPTCAELIHRMVREAEEIIEARL ARMVGHKSLQPA
Sequences:
>Translated_332_residues MALKTRFTETFGVEHPIVQGGMQWVGRAELVAAVANAGGLGFITALTQPTPDDLRREIERCQKLTDKPFGVNLTILPAIT PPPYAEYRQAIIDSGVKIVETAGYKPQEHVDHFKEHGIKVIHKCTAVRHALSAERMGVDAISIDGFECAGHPGEDDIPGL ILIPAAADKVKIPMIASGGFGDARGLVAALALGADGVNMGTRFMCTAESPIHQKVKEQIVANDERQTNLIFRTMHNTARV AKNAVSDEVVAIERRGGAKFEDVKDLVAGARGKVVYEQGDPDYGIWSAGMVQGLIHDIPTCAELIHRMVREAEEIIEARL ARMVGHKSLQPA >Mature_331_residues ALKTRFTETFGVEHPIVQGGMQWVGRAELVAAVANAGGLGFITALTQPTPDDLRREIERCQKLTDKPFGVNLTILPAITP PPYAEYRQAIIDSGVKIVETAGYKPQEHVDHFKEHGIKVIHKCTAVRHALSAERMGVDAISIDGFECAGHPGEDDIPGLI LIPAAADKVKIPMIASGGFGDARGLVAALALGADGVNMGTRFMCTAESPIHQKVKEQIVANDERQTNLIFRTMHNTARVA KNAVSDEVVAIERRGGAKFEDVKDLVAGARGKVVYEQGDPDYGIWSAGMVQGLIHDIPTCAELIHRMVREAEEIIEARLA RMVGHKSLQPA
Specific function: Catalyzes the oxidative denitrification of nitronates to their corresponding aldehydes and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 35906; Mature: 35775
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKTRFTETFGVEHPIVQGGMQWVGRAELVAAVANAGGLGFITALTQPTPDDLRREIER CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH CQKLTDKPFGVNLTILPAITPPPYAEYRQAIIDSGVKIVETAGYKPQEHVDHFKEHGIKV HHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCHHH IHKCTAVRHALSAERMGVDAISIDGFECAGHPGEDDIPGLILIPAAADKVKIPMIASGGF HHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCC GDARGLVAALALGADGVNMGTRFMCTAESPIHQKVKEQIVANDERQTNLIFRTMHNTARV CHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AKNAVSDEVVAIERRGGAKFEDVKDLVAGARGKVVYEQGDPDYGIWSAGMVQGLIHDIPT HHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCHH CAELIHRMVREAEEIIEARLARMVGHKSLQPA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ALKTRFTETFGVEHPIVQGGMQWVGRAELVAAVANAGGLGFITALTQPTPDDLRREIER CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH CQKLTDKPFGVNLTILPAITPPPYAEYRQAIIDSGVKIVETAGYKPQEHVDHFKEHGIKV HHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCHHH IHKCTAVRHALSAERMGVDAISIDGFECAGHPGEDDIPGLILIPAAADKVKIPMIASGGF HHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCC GDARGLVAALALGADGVNMGTRFMCTAESPIHQKVKEQIVANDERQTNLIFRTMHNTARV CHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AKNAVSDEVVAIERRGGAKFEDVKDLVAGARGKVVYEQGDPDYGIWSAGMVQGLIHDIPT HHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCHH CAELIHRMVREAEEIIEARLARMVGHKSLQPA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]