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The map label for this gene is cirA [C]

Identifier: 197105976

GI number: 197105976

Start: 2884812

End: 2887433

Strand: Reverse

Name: cirA [C]

Synonym: PHZ_c2515

Alternate gene names: 197105976

Gene position: 2887433-2884812 (Counterclockwise)

Preceding gene: 197105978

Following gene: 197105975

Centisome position: 72.25

GC content: 70.52

Gene sequence:

>2622_bases
ATGGCCGTGACTTGGCGTGCGACGAAGCAGATCGCGCTGACCGGAGCGTCGTTGGTCGCCATGCTGGCGGCGGGTCCTGC
GCTTGCACAGACCTCTGGCGCGTCCGCCGCCGGCGAGGCCACCGTCGACGAAATCGTCGTCACGGGAACCAGCATCCGCG
GCGTGCCGCCCACGGGGTCGAACCTCATCGGGGTGACGCGGGAGGACATCAAGGCCGTCGGCGCGGCGACCGCGCCCGAG
CTGCTCGCCAGCGTCCCGCAGCTCAACAGCTTCAACACCGCGCCGCGCGCCGCCAACGCCGGGGCCGGCTCGTTCGCGCC
GGGCCTGCGCAGCCTGCCGGCGTCGGCCACCCTGCCGCTCCTGAACGGCCACCGGCTGGTCGCCGGCGGGGCCAACGAGA
CGAACCCCGACTTCCCGTTCGTGCCGGACCTGGCCATCGAGCGGGTGGAGATCGTCGCCGACGGCGCCTCTTCCATCTAC
GGCTCGGACGCGATCGCCGGGGTCGTGAACTTCATCACCCGCAAGCGCTACTCCGGCGTCGAGATGTCGGCCCGCTACGG
CGTGGCCGAGGACTACGAGAGCTTCAGCGTCAGCGGCCTGGCGGGCCGTGACTGGGCTGGCGAATGGGGCGACGGCTCGA
TTCTGGCCGCCTACCAGTACTCCGAGAACGGGAACGTCACCGGCGCCGACCGCGACTACCGGATCGTGGATTTCCGCCCG
TTCGGGGGCGTCGATACCCGGGGGACCAGCTGCCCCTCGCCGAACCTGGTCGTCGGCGGCGTGGTCCATGCGGCGCCGAC
CCTGACGCCGAACACCACCAACTATTGCGACGTGGGGGCGCCGGTGGACCTGGTCCCGGCCTCGCGCCTGCACAGCGCCT
TCGTCACCGCCCGGCAGGACGTGGGCGAGCGGGTCACCCTATGGGGCGACCTGCTGTACTCGGACCGTAAGGACGCGGTG
CAGGCCGCGATCCCGGGCCAGACGGTGACGCTGACCGCCGCGAACCCGTTCTTCCGGGCCCCGGCCGGCAGCGCGGCGAC
GGCGGGGACGGTCTTCTTCCGGCCGGACAACCTGGTCGGCGCGGACCACTTCGACCAGACCTACCATGTGAAGGCCGGCA
ACTCGTCGGCGGGCGCCGACGTGCTGCTGCCGCGCGACTTCAACCTGAGCCTCTACGGAACCTACGACTGGTCCCGGCAC
GTCGCGTTCCAGCCGATGATCAATCCGGTGGCGCTCGCCCAGGCCGCGGCCGGGACCAGCCCCTCGACGGCGCTGGATCC
GTTCGGGGAGGGGACCGCCCCGACGGTGGTCCAGGCGATCACCGACTACTCGACCAGCGTCACGATCAAGCAGCGCACCA
AGGTGGCGGCGGCCAAGATCGACGGGCCGCTCTTCGACCTGCCCGCGGGCGAGCTGAAGATCGCCGCCGGCGTGGAATAC
CGGAAGGAGACCTTCCAACAGCGCGGATTCGTCGGCGTGACCCCGGTTCCGGAGAACCTGGGCCGCGACATCAAGTCGGT
CTACGGCGAACTCTTCGTGCCGGTGGTGGGCGACGCCAATTCAGCACCCCTCATCCATCGCCTGTCGCTGTCGCTGTCGG
GCCGGTACGACCACTACAGCGACTTCGGCTCGACGACCAATCCGAAGGTCGGCGTCAACTGGGACCCGGTGGAGGGCGTC
ACGATCCGCGGCACGTACGGCCGCTCGTTCCGGGCGCCCGGCCTGCGCGACGTCGGCGCGACCGTCGGCGCCTACTACCT
GGACGCTGTCACCGCCGGCGTCGCGGCCCGCGATCCGACCCGTGGCTCCGCCCAGGTCAACACGGTCTATCTGCTCGGCG
GCAACAAGGACCTGCAGCCGGAGAAGGCCGAGACCTACTCCCTGGGGGTCGACTGGCGCCCGACGTTCCTGCCCGAGCTC
CGCGCCGGCGTGACGTTCTACAGCATCGACTTCACCGACGTGATCGGCACGCCGCCCACGGCGATGGTCTTCACGGACCC
CACGTTCTCCTCGGTCGTGTACCGGGACCCGACCGCCGCCCAGCTGAGCGGCCTGCTGGCGATCGCCGTACCGGTGAACC
TGCCCACGCCGCTGCCGACGGTCGGCAACCTGCTGGACCTGCGCCGCGGCAACTTCGGCGTGCGTAAGACGAACGGCCTG
GATTTCGACGTGAACTACCGGCGCGCGACCGACTTCGGCGCCGTGTTCGGGGGCGTCGCCGGCAACTACATCCTGAAGTA
CGACACCCGGCTCTCGCCGACCGCGCCGGTGTCGAACTCGCTGCGGCTGGGCGTTCCGCGCGCGACCGTCCGCACGACCC
TCGGGGCCACGGCGGGTCCGGTGAGCGTCGTGGGCTTCGTGAACTACCGCGACGGCGTGACCAACACCTACGCCACGCCG
ACCGGCTTGAGCCAGTACGAGGCCAAGTCCTACACCACCGTCGACCTGCGTCTGAACTGGACGCTGCCGGACGCCGGCTG
GACGCAGGGGACCGAGCTGGCGCTGCAGGTCAACGACGTCTTCGACGAGGAGCCGCCGTTCTTCCCGGCCACGGACGGCA
TTGGCGGCGGCTACAACCCGATCGGCCGCTTCGTGGCGGTGAACCTGCGCAAGACCTTCTGA

Upstream 100 bases:

>100_bases
CTCGGCGCTAGAAACTTATTTAGCACTAAATGAATGAACTTGACCGTCCCGATCCGGCGAGGTACCGGCTGGGGAAAGCT
ACAAATCAGGGGAGGGTTCG

Downstream 100 bases:

>100_bases
TCCAGGCACCGGCCGAAGCGCCCCAGTATGACGAGTTCTGTCCTTCGCCGGGCGCCCGGCTTCGACCCCGCAAGGCTCGC
CGCCGTCGGCCCGGCCCTCC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB Dependent Receptor Protein; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor-Like Protein; Outer Membrane Protein; NB-Dependent Receptor Domain Protein; NB-Dependent Receptor Plug; Nb-Dependent Receptor; Nb-Dependent Outer Membrane Receptor Protein; NB Dependent Receptor; NB-Dependent Receptor Protein; Outer Membrane Receptor Protein; Outer Membrane Cobalamin Receptor Protein; Vitamin; Fe Transporter; NB-Dependent Receptor Domain-Containing Protein; Ferric Enterobactin Receptor Protein; NB-Dependent Receptor With TonB-Box

Number of amino acids: Translated: 873; Mature: 872

Protein sequence:

>873_residues
MAVTWRATKQIALTGASLVAMLAAGPALAQTSGASAAGEATVDEIVVTGTSIRGVPPTGSNLIGVTREDIKAVGAATAPE
LLASVPQLNSFNTAPRAANAGAGSFAPGLRSLPASATLPLLNGHRLVAGGANETNPDFPFVPDLAIERVEIVADGASSIY
GSDAIAGVVNFITRKRYSGVEMSARYGVAEDYESFSVSGLAGRDWAGEWGDGSILAAYQYSENGNVTGADRDYRIVDFRP
FGGVDTRGTSCPSPNLVVGGVVHAAPTLTPNTTNYCDVGAPVDLVPASRLHSAFVTARQDVGERVTLWGDLLYSDRKDAV
QAAIPGQTVTLTAANPFFRAPAGSAATAGTVFFRPDNLVGADHFDQTYHVKAGNSSAGADVLLPRDFNLSLYGTYDWSRH
VAFQPMINPVALAQAAAGTSPSTALDPFGEGTAPTVVQAITDYSTSVTIKQRTKVAAAKIDGPLFDLPAGELKIAAGVEY
RKETFQQRGFVGVTPVPENLGRDIKSVYGELFVPVVGDANSAPLIHRLSLSLSGRYDHYSDFGSTTNPKVGVNWDPVEGV
TIRGTYGRSFRAPGLRDVGATVGAYYLDAVTAGVAARDPTRGSAQVNTVYLLGGNKDLQPEKAETYSLGVDWRPTFLPEL
RAGVTFYSIDFTDVIGTPPTAMVFTDPTFSSVVYRDPTAAQLSGLLAIAVPVNLPTPLPTVGNLLDLRRGNFGVRKTNGL
DFDVNYRRATDFGAVFGGVAGNYILKYDTRLSPTAPVSNSLRLGVPRATVRTTLGATAGPVSVVGFVNYRDGVTNTYATP
TGLSQYEAKSYTTVDLRLNWTLPDAGWTQGTELALQVNDVFDEEPPFFPATDGIGGGYNPIGRFVAVNLRKTF

Sequences:

>Translated_873_residues
MAVTWRATKQIALTGASLVAMLAAGPALAQTSGASAAGEATVDEIVVTGTSIRGVPPTGSNLIGVTREDIKAVGAATAPE
LLASVPQLNSFNTAPRAANAGAGSFAPGLRSLPASATLPLLNGHRLVAGGANETNPDFPFVPDLAIERVEIVADGASSIY
GSDAIAGVVNFITRKRYSGVEMSARYGVAEDYESFSVSGLAGRDWAGEWGDGSILAAYQYSENGNVTGADRDYRIVDFRP
FGGVDTRGTSCPSPNLVVGGVVHAAPTLTPNTTNYCDVGAPVDLVPASRLHSAFVTARQDVGERVTLWGDLLYSDRKDAV
QAAIPGQTVTLTAANPFFRAPAGSAATAGTVFFRPDNLVGADHFDQTYHVKAGNSSAGADVLLPRDFNLSLYGTYDWSRH
VAFQPMINPVALAQAAAGTSPSTALDPFGEGTAPTVVQAITDYSTSVTIKQRTKVAAAKIDGPLFDLPAGELKIAAGVEY
RKETFQQRGFVGVTPVPENLGRDIKSVYGELFVPVVGDANSAPLIHRLSLSLSGRYDHYSDFGSTTNPKVGVNWDPVEGV
TIRGTYGRSFRAPGLRDVGATVGAYYLDAVTAGVAARDPTRGSAQVNTVYLLGGNKDLQPEKAETYSLGVDWRPTFLPEL
RAGVTFYSIDFTDVIGTPPTAMVFTDPTFSSVVYRDPTAAQLSGLLAIAVPVNLPTPLPTVGNLLDLRRGNFGVRKTNGL
DFDVNYRRATDFGAVFGGVAGNYILKYDTRLSPTAPVSNSLRLGVPRATVRTTLGATAGPVSVVGFVNYRDGVTNTYATP
TGLSQYEAKSYTTVDLRLNWTLPDAGWTQGTELALQVNDVFDEEPPFFPATDGIGGGYNPIGRFVAVNLRKTF
>Mature_872_residues
AVTWRATKQIALTGASLVAMLAAGPALAQTSGASAAGEATVDEIVVTGTSIRGVPPTGSNLIGVTREDIKAVGAATAPEL
LASVPQLNSFNTAPRAANAGAGSFAPGLRSLPASATLPLLNGHRLVAGGANETNPDFPFVPDLAIERVEIVADGASSIYG
SDAIAGVVNFITRKRYSGVEMSARYGVAEDYESFSVSGLAGRDWAGEWGDGSILAAYQYSENGNVTGADRDYRIVDFRPF
GGVDTRGTSCPSPNLVVGGVVHAAPTLTPNTTNYCDVGAPVDLVPASRLHSAFVTARQDVGERVTLWGDLLYSDRKDAVQ
AAIPGQTVTLTAANPFFRAPAGSAATAGTVFFRPDNLVGADHFDQTYHVKAGNSSAGADVLLPRDFNLSLYGTYDWSRHV
AFQPMINPVALAQAAAGTSPSTALDPFGEGTAPTVVQAITDYSTSVTIKQRTKVAAAKIDGPLFDLPAGELKIAAGVEYR
KETFQQRGFVGVTPVPENLGRDIKSVYGELFVPVVGDANSAPLIHRLSLSLSGRYDHYSDFGSTTNPKVGVNWDPVEGVT
IRGTYGRSFRAPGLRDVGATVGAYYLDAVTAGVAARDPTRGSAQVNTVYLLGGNKDLQPEKAETYSLGVDWRPTFLPELR
AGVTFYSIDFTDVIGTPPTAMVFTDPTFSSVVYRDPTAAQLSGLLAIAVPVNLPTPLPTVGNLLDLRRGNFGVRKTNGLD
FDVNYRRATDFGAVFGGVAGNYILKYDTRLSPTAPVSNSLRLGVPRATVRTTLGATAGPVSVVGFVNYRDGVTNTYATPT
GLSQYEAKSYTTVDLRLNWTLPDAGWTQGTELALQVNDVFDEEPPFFPATDGIGGGYNPIGRFVAVNLRKTF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788478, Length=171, Percent_Identity=30.9941520467836, Blast_Score=68, Evalue=3e-12,
Organism=Escherichia coli, GI1790405, Length=135, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91898; Mature: 91767

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTWRATKQIALTGASLVAMLAAGPALAQTSGASAAGEATVDEIVVTGTSIRGVPPTGS
CEEEEECCCEEEECHHHHHHHHHCCCHHHCCCCCCCCCCCCCCEEEEECCEECCCCCCCC
NLIGVTREDIKAVGAATAPELLASVPQLNSFNTAPRAANAGAGSFAPGLRSLPASATLPL
CEEEECHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCEE
LNGHRLVAGGANETNPDFPFVPDLAIERVEIVADGASSIYGSDAIAGVVNFITRKRYSGV
ECCCEEEECCCCCCCCCCCCCCCHHHEEEEEEECCCHHHCCCHHHHHHHHHHHHHHCCCC
EMSARYGVAEDYESFSVSGLAGRDWAGEWGDGSILAAYQYSENGNVTGADRDYRIVDFRP
EEHCCCCCHHCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCEEEEEEEC
FGGVDTRGTSCPSPNLVVGGVVHAAPTLTPNTTNYCDVGAPVDLVPASRLHSAFVTARQD
CCCCCCCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
VGERVTLWGDLLYSDRKDAVQAAIPGQTVTLTAANPFFRAPAGSAATAGTVFFRPDNLVG
CCCEEEEEEHHHHCCCHHHHHHCCCCCEEEEEECCCCEECCCCCCCCCCEEEECCCCCCC
ADHFDQTYHVKAGNSSAGADVLLPRDFNLSLYGTYDWSRHVAFQPMINPVALAQAAAGTS
CCCCCCEEEEECCCCCCCCEEEECCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHCCCC
PSTALDPFGEGTAPTVVQAITDYSTSVTIKQRTKVAAAKIDGPLFDLPAGELKIAAGVEY
CCCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHCEEEEEECCCCEEECCCCCEEEEECCHH
RKETFQQRGFVGVTPVPENLGRDIKSVYGELFVPVVGDANSAPLIHRLSLSLSGRYDHYS
HHHHHHHCCCEECCCCCHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEEEEECCCCCCHH
DFGSTTNPKVGVNWDPVEGVTIRGTYGRSFRAPGLRDVGATVGAYYLDAVTAGVAARDPT
CCCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
RGSAQVNTVYLLGGNKDLQPEKAETYSLGVDWRPTFLPELRAGVTFYSIDFTDVIGTPPT
CCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHCCEEEEEEEEHHHCCCCCC
AMVFTDPTFSSVVYRDPTAAQLSGLLAIAVPVNLPTPLPTVGNLLDLRRGNFGVRKTNGL
EEEEECCCCCCEEECCCCHHHHCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCEEECCCC
DFDVNYRRATDFGAVFGGVAGNYILKYDTRLSPTAPVSNSLRLGVPRATVRTTLGATAGP
EEEECCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEECCCCHHHHHHCCCCCCC
VSVVGFVNYRDGVTNTYATPTGLSQYEAKSYTTVDLRLNWTLPDAGWTQGTELALQVNDV
EEEEEEEEECCCCCCCCCCCCCCCHHCCCCEEEEEEEEEEECCCCCCCCCCEEEEEEECC
FDEEPPFFPATDGIGGGYNPIGRFVAVNLRKTF
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure 
AVTWRATKQIALTGASLVAMLAAGPALAQTSGASAAGEATVDEIVVTGTSIRGVPPTGS
EEEEECCCEEEECHHHHHHHHHCCCHHHCCCCCCCCCCCCCCEEEEECCEECCCCCCCC
NLIGVTREDIKAVGAATAPELLASVPQLNSFNTAPRAANAGAGSFAPGLRSLPASATLPL
CEEEECHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCEE
LNGHRLVAGGANETNPDFPFVPDLAIERVEIVADGASSIYGSDAIAGVVNFITRKRYSGV
ECCCEEEECCCCCCCCCCCCCCCHHHEEEEEEECCCHHHCCCHHHHHHHHHHHHHHCCCC
EMSARYGVAEDYESFSVSGLAGRDWAGEWGDGSILAAYQYSENGNVTGADRDYRIVDFRP
EEHCCCCCHHCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCEEEEEEEC
FGGVDTRGTSCPSPNLVVGGVVHAAPTLTPNTTNYCDVGAPVDLVPASRLHSAFVTARQD
CCCCCCCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
VGERVTLWGDLLYSDRKDAVQAAIPGQTVTLTAANPFFRAPAGSAATAGTVFFRPDNLVG
CCCEEEEEEHHHHCCCHHHHHHCCCCCEEEEEECCCCEECCCCCCCCCCEEEECCCCCCC
ADHFDQTYHVKAGNSSAGADVLLPRDFNLSLYGTYDWSRHVAFQPMINPVALAQAAAGTS
CCCCCCEEEEECCCCCCCCEEEECCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHCCCC
PSTALDPFGEGTAPTVVQAITDYSTSVTIKQRTKVAAAKIDGPLFDLPAGELKIAAGVEY
CCCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHCEEEEEECCCCEEECCCCCEEEEECCHH
RKETFQQRGFVGVTPVPENLGRDIKSVYGELFVPVVGDANSAPLIHRLSLSLSGRYDHYS
HHHHHHHCCCEECCCCCHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEEEEECCCCCCHH
DFGSTTNPKVGVNWDPVEGVTIRGTYGRSFRAPGLRDVGATVGAYYLDAVTAGVAARDPT
CCCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
RGSAQVNTVYLLGGNKDLQPEKAETYSLGVDWRPTFLPELRAGVTFYSIDFTDVIGTPPT
CCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHCCEEEEEEEEHHHCCCCCC
AMVFTDPTFSSVVYRDPTAAQLSGLLAIAVPVNLPTPLPTVGNLLDLRRGNFGVRKTNGL
EEEEECCCCCCEEECCCCHHHHCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCEEECCCC
DFDVNYRRATDFGAVFGGVAGNYILKYDTRLSPTAPVSNSLRLGVPRATVRTTLGATAGP
EEEECCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEECCCCHHHHHHCCCCCCC
VSVVGFVNYRDGVTNTYATPTGLSQYEAKSYTTVDLRLNWTLPDAGWTQGTELALQVNDV
EEEEEEEEECCCCCCCCCCCCCCCHHCCCCEEEEEEEEEEECCCCCCCCCCEEEEEEECC
FDEEPPFFPATDGIGGGYNPIGRFVAVNLRKTF
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA