| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is exoU [H]
Identifier: 197105970
GI number: 197105970
Start: 2876289
End: 2877224
Strand: Reverse
Name: exoU [H]
Synonym: PHZ_c2509
Alternate gene names: 197105970
Gene position: 2877224-2876289 (Counterclockwise)
Preceding gene: 197105971
Following gene: 197105966
Centisome position: 72.0
GC content: 74.25
Gene sequence:
>936_bases GTGCGCGCGCCTGAGCGGGCCGGCTCCGTTGCGGTCATCGTGGCGGCGAAGGACGCGGCCGCCACCATCGCGCGTGCGGT GGCTTCGGCGCTGGCCCAGCCCGACGCGGCCGAGGTCGTGGTCGTGGACGACGGCAGCACCGACGAGACGGCGCGGCGCG CGCGGGACGCGGACGACGGTTCGGGCCGGCTGACGGTAGTCTCCCAGGCCCAGGCGGGTCCGGCGGCGGCGCGCAACCTG GCCCTGTCGCTCAGCCGCTCGCCTTGGATCTGTCCGCTGGACGCCGACGACTTCCTGAACCCGGGGCGCCTGGGCCGGCT GCTCGCGCAGGCGCAGGGTTGCGACCTGGTCGCCGACGACCTGCTGCTCGTCGCCGAGGGCGCGGAGGATGCGGCGCCGA AACCGCTGATCGGCGAGCAACTGGACCTGCCCTTCGTGCTGGATTTCCGGACCTTTGTGGACGCCAACGTGAGCCGCCCC GGCCTGGCGCGGCGCGAGTTCGGCTTCCTGAAGCCCCTGATCCGCCGCGGATTCCTGGAGGCCGCCGAGCTGGCCTACGA TCCGGCGCTGCGGCTGGGCGAGGACTTCATCCTCTACGCGACGGCCCTGGCCAAGGGCGCGCGGTTCAGGGTGGTGCAGG CCTGCGGCTACGTCTCTGTGCAGCGCCCCGGCTCGCTGAGCCACAACCACACGATCGCCGACCTGAAGGCGCTGCAGAGG GCGAGCGCACGCTTGGCGGGCCTGCCCGGCCTGGGCGCGGCGGAAATCGCCGCGGCCCGCCGGCATCACCGGCACGTGAC GGCGAAGGTGGACCTGCGCGAGGTGCTCGAGGCCAAGCAGACGGGCGGCCTGCTGGGGGCGCTCGCAGCGGTGGCGATGC GTGCGGCGAGCGCGCCCTACATCCTTCGGCAGGGCCTCGGCGGACAGCGGGCCTGA
Upstream 100 bases:
>100_bases TCTCGTCGTCAGGGGGCTCCGTTGCGGCGCATCCAGGGGACCAGCCCACAAGGCCGTCGCCATGTGCGACCGACGCGAAC CCTCCATCCGGGAGCGGCCG
Downstream 100 bases:
>100_bases GCGCTCCTCCTCAGGCCTCTTCGGCCATGGCGCGGACCAGCTCCACCAGCTTGCGGCGCAGCGCCGGCTGGGCGATGCGC GGGAAGGTCGACATCAGCTC
Product: glucosyltransferase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MRAPERAGSVAVIVAAKDAAATIARAVASALAQPDAAEVVVVDDGSTDETARRARDADDGSGRLTVVSQAQAGPAAARNL ALSLSRSPWICPLDADDFLNPGRLGRLLAQAQGCDLVADDLLLVAEGAEDAAPKPLIGEQLDLPFVLDFRTFVDANVSRP GLARREFGFLKPLIRRGFLEAAELAYDPALRLGEDFILYATALAKGARFRVVQACGYVSVQRPGSLSHNHTIADLKALQR ASARLAGLPGLGAAEIAAARRHHRHVTAKVDLREVLEAKQTGGLLGALAAVAMRAASAPYILRQGLGGQRA
Sequences:
>Translated_311_residues MRAPERAGSVAVIVAAKDAAATIARAVASALAQPDAAEVVVVDDGSTDETARRARDADDGSGRLTVVSQAQAGPAAARNL ALSLSRSPWICPLDADDFLNPGRLGRLLAQAQGCDLVADDLLLVAEGAEDAAPKPLIGEQLDLPFVLDFRTFVDANVSRP GLARREFGFLKPLIRRGFLEAAELAYDPALRLGEDFILYATALAKGARFRVVQACGYVSVQRPGSLSHNHTIADLKALQR ASARLAGLPGLGAAEIAAARRHHRHVTAKVDLREVLEAKQTGGLLGALAAVAMRAASAPYILRQGLGGQRA >Mature_311_residues MRAPERAGSVAVIVAAKDAAATIARAVASALAQPDAAEVVVVDDGSTDETARRARDADDGSGRLTVVSQAQAGPAAARNL ALSLSRSPWICPLDADDFLNPGRLGRLLAQAQGCDLVADDLLLVAEGAEDAAPKPLIGEQLDLPFVLDFRTFVDANVSRP GLARREFGFLKPLIRRGFLEAAELAYDPALRLGEDFILYATALAKGARFRVVQACGYVSVQRPGSLSHNHTIADLKALQR ASARLAGLPGLGAAEIAAARRHHRHVTAKVDLREVLEAKQTGGLLGALAAVAMRAASAPYILRQGLGGQRA
Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the sixth sugar (glucose), catalyzes the formation of a beta-1,6 linkage between the fifth and sixth sugar [H]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 32599; Mature: 32599
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAPERAGSVAVIVAAKDAAATIARAVASALAQPDAAEVVVVDDGSTDETARRARDADDG CCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCCCC SGRLTVVSQAQAGPAAARNLALSLSRSPWICPLDADDFLNPGRLGRLLAQAQGCDLVADD CCEEEEEECCCCCHHHHHHHEEEECCCCCEECCCHHHCCCCHHHHHHHHHHCCCCEECCC LLLVAEGAEDAAPKPLIGEQLDLPFVLDFRTFVDANVSRPGLARREFGFLKPLIRRGFLE EEEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH AAELAYDPALRLGEDFILYATALAKGARFRVVQACGYVSVQRPGSLSHNHTIADLKALQR HHHHHHCHHHHCCCHHHHHHHHHHCCCCEEEEHHCCCEEEECCCCCCCCCHHHHHHHHHH ASARLAGLPGLGAAEIAAARRHHRHVTAKVDLREVLEAKQTGGLLGALAAVAMRAASAPY HHHHHCCCCCCCHHHHHHHHHHHHEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHCCCCH ILRQGLGGQRA HHHHCCCCCCC >Mature Secondary Structure MRAPERAGSVAVIVAAKDAAATIARAVASALAQPDAAEVVVVDDGSTDETARRARDADDG CCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCCCC SGRLTVVSQAQAGPAAARNLALSLSRSPWICPLDADDFLNPGRLGRLLAQAQGCDLVADD CCEEEEEECCCCCHHHHHHHEEEECCCCCEECCCHHHCCCCHHHHHHHHHHCCCCEECCC LLLVAEGAEDAAPKPLIGEQLDLPFVLDFRTFVDANVSRPGLARREFGFLKPLIRRGFLE EEEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH AAELAYDPALRLGEDFILYATALAKGARFRVVQACGYVSVQRPGSLSHNHTIADLKALQR HHHHHHCHHHHCCCHHHHHHHHHHCCCCEEEEHHCCCEEEECCCCCCCCCHHHHHHHHHH ASARLAGLPGLGAAEIAAARRHHRHVTAKVDLREVLEAKQTGGLLGALAAVAMRAASAPY HHHHHCCCCCCCHHHHHHHHHHHHEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHCCCCH ILRQGLGGQRA HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226645; 8118055; 11481431 [H]