| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197105888
Identifier: 197105888
GI number: 197105888
Start: 2767937
End: 2769850
Strand: Direct
Name: 197105888
Synonym: PHZ_c2427
Alternate gene names: NA
Gene position: 2767937-2769850 (Clockwise)
Preceding gene: 197105883
Following gene: 197105892
Centisome position: 69.26
GC content: 67.66
Gene sequence:
>1914_bases ATGCCAGCGCGAGAATCTGACCGCGCCTCGGACGCCAGCGGCAACGGGCATCAGAAGCGCGGCCGGAAGCCGAAACCGAT CACGGCGTTTCCAACCGCGCTGACGCTGCAATGGGACGAGCCGGAGACACTCGGCGAGGCCCTGGATCTCCACACCCGTC GCCATGGCGAGACCGTGTGGCACCTCGCCCGAGCCCTGCTCGCGCAGGGTCTGCCGGTCGATTACTACACCCTCAAGGTC TGGCGCCTGGGTCGGAAAGAACCTGCCACCGCCAGAAGCTTCGAGATCCTCGCCGCCATCGAGCGCCGCTACCGGCTCCC CTCAGGCTATTTCCGGGAAAAGCTCCTCCACAGGACGCGGGCCGTCCGCGGACTTCATCACGTGACGCCTTCAGACGCCG AGCGCAGACGTCTGGCCTGGCACCTGCCTGACGATTTCGATCAGCGCCCCCCTGCCGAGCGGGAGGAGATCCTCGCCTGG GTGCGGGAGGTGGTGGTGTCCGGGGCCACTGAGTACCGGCGATATCAGCGGGAGAAGCTGCAGCACCGCTTTGCGTTCAG TTTCGCCGCCTCAGACCGTCTCAGCTCCCGACCGGCAGAGCTTCAGCCGCCGCCCGCGCTGGCGGAGGAGATGGCCGCCT ACGTCTCGTTCAAGACGTCAACCATGACACCGCGCGGCTACCGCCGCCGAACAAGCTGGGGCGCCGTATCGGCTGACCAG AAGAGCGCCCATCTCGGGCTCCTGTTCGGCGCCCTCGCCGCAGCACCTGATGGCCCGGTGCGGGGCGCCGGCGTCCCACG CGATGCGCTGTGTTTTAGCCTGCTCGTCTTCCCGGCGGTCTGGGACTGGTACCTGCGCTGGCGCGAGGAGCGCCGGGGAT TCTTCACCTCCTGGGAGGTGGACATGCTGGTGAGCGGCGCGCTGGCGCTCACGTCGCCGGAAACAGGCTGGCTGACGCAG ACGCCAGCCCTCGCAGGGCGCCTCGTCGCCATTCCAGGCCTGATCACGGAAGCAGAGATCGAACAGGTGCGCCGCGACTG GCCGGCCGCCTGCGCCAGTCTGACAACACATGCGCGCGCCCGCGCCCGGGAGATCAAGGCTGCGCGGCGCGTGCATCACG ATCCCTTCGAACCGATCCTCCCGGTCCTGGAGGCTGCAAGCCCCGTCGGCGAGTATCGCAAGATCGCCGACGAGATCCTC AGGCGGATGCCGTGCCGGCGACGCTACGCCAGGCCAGCAGCAGAGGCGGTCCGCGCCTTCCTGATGATCCGCCTGGGCCT GCATCTCGGCTTCCGGCAGCGAAACCTCCGAGAGCTTCTGTTCTGCCCGCGAGGATCTCGTCCGACGTCTGAGCGCCAGC TCGCCGACCTGCGGCGCGGCGAGCTCCGATGGAACGATCAGCATGGCGGCTGGGAAGTCTTCGCCCCGGCCGCTGCGTTC AAGAATGCGAAGTCATCCTTCTTCGCCGGCCGCCCCTTCAGCATGGTGCTGCCGGACCTTGGCGGGCTCTACGCACATAT CGAACTCTGGCGTGAGTGCGACCGCGCGCTGCTCATCGGCCCCGCCACCGATCCCGGCACCTTCTTCGTAAAGTCGGCGA AGCGCTCCAGCTCCACCGCCGCCTACAACCAGAACACCTTCTATGAGGCATGGCGCCTGGCGATCCAGCGCTACGGCGTA CGCAATCCGTGGACCGGCCGCGGCGCGATCACAGGCCTCCTGCCGCATGGTCCGCACAGCGTCCGGGACGTTCTGGCCAC CCACGTTCTCAAACAGACAGGCTCGTACGAGCAGGCCAGCTACGCGATCCAGGACACCCCGGAGATGGTGGCGAGCCACT ACGGACGTTTCCTCCCGCAGGACAAGGCGGCGATCGCAGCCGAGGTGCTGAACCGTGTATGGGCGGACAGCTGA
Upstream 100 bases:
>100_bases GGGACGGTCGTTGTCTGCTCGGGCGACGCGCGAATCTGAGGGTGTCGGCCGTTCTGGTGCGACCTGGGTTCTGAACAATT CCTTGGACCCAGGGGGCTGA
Downstream 100 bases:
>100_bases GCGAACGGCCGCCGCTACCCCAGCTGCGCAGCTCGTCGGATGTCGCGCCGCACGTCGGCTACGTCGAGGTAGGGGAGATT GGCGAGGCTGATCGTGTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 637; Mature: 636
Protein sequence:
>637_residues MPARESDRASDASGNGHQKRGRKPKPITAFPTALTLQWDEPETLGEALDLHTRRHGETVWHLARALLAQGLPVDYYTLKV WRLGRKEPATARSFEILAAIERRYRLPSGYFREKLLHRTRAVRGLHHVTPSDAERRRLAWHLPDDFDQRPPAEREEILAW VREVVVSGATEYRRYQREKLQHRFAFSFAASDRLSSRPAELQPPPALAEEMAAYVSFKTSTMTPRGYRRRTSWGAVSADQ KSAHLGLLFGALAAAPDGPVRGAGVPRDALCFSLLVFPAVWDWYLRWREERRGFFTSWEVDMLVSGALALTSPETGWLTQ TPALAGRLVAIPGLITEAEIEQVRRDWPAACASLTTHARARAREIKAARRVHHDPFEPILPVLEAASPVGEYRKIADEIL RRMPCRRRYARPAAEAVRAFLMIRLGLHLGFRQRNLRELLFCPRGSRPTSERQLADLRRGELRWNDQHGGWEVFAPAAAF KNAKSSFFAGRPFSMVLPDLGGLYAHIELWRECDRALLIGPATDPGTFFVKSAKRSSSTAAYNQNTFYEAWRLAIQRYGV RNPWTGRGAITGLLPHGPHSVRDVLATHVLKQTGSYEQASYAIQDTPEMVASHYGRFLPQDKAAIAAEVLNRVWADS
Sequences:
>Translated_637_residues MPARESDRASDASGNGHQKRGRKPKPITAFPTALTLQWDEPETLGEALDLHTRRHGETVWHLARALLAQGLPVDYYTLKV WRLGRKEPATARSFEILAAIERRYRLPSGYFREKLLHRTRAVRGLHHVTPSDAERRRLAWHLPDDFDQRPPAEREEILAW VREVVVSGATEYRRYQREKLQHRFAFSFAASDRLSSRPAELQPPPALAEEMAAYVSFKTSTMTPRGYRRRTSWGAVSADQ KSAHLGLLFGALAAAPDGPVRGAGVPRDALCFSLLVFPAVWDWYLRWREERRGFFTSWEVDMLVSGALALTSPETGWLTQ TPALAGRLVAIPGLITEAEIEQVRRDWPAACASLTTHARARAREIKAARRVHHDPFEPILPVLEAASPVGEYRKIADEIL RRMPCRRRYARPAAEAVRAFLMIRLGLHLGFRQRNLRELLFCPRGSRPTSERQLADLRRGELRWNDQHGGWEVFAPAAAF KNAKSSFFAGRPFSMVLPDLGGLYAHIELWRECDRALLIGPATDPGTFFVKSAKRSSSTAAYNQNTFYEAWRLAIQRYGV RNPWTGRGAITGLLPHGPHSVRDVLATHVLKQTGSYEQASYAIQDTPEMVASHYGRFLPQDKAAIAAEVLNRVWADS >Mature_636_residues PARESDRASDASGNGHQKRGRKPKPITAFPTALTLQWDEPETLGEALDLHTRRHGETVWHLARALLAQGLPVDYYTLKVW RLGRKEPATARSFEILAAIERRYRLPSGYFREKLLHRTRAVRGLHHVTPSDAERRRLAWHLPDDFDQRPPAEREEILAWV REVVVSGATEYRRYQREKLQHRFAFSFAASDRLSSRPAELQPPPALAEEMAAYVSFKTSTMTPRGYRRRTSWGAVSADQK SAHLGLLFGALAAAPDGPVRGAGVPRDALCFSLLVFPAVWDWYLRWREERRGFFTSWEVDMLVSGALALTSPETGWLTQT PALAGRLVAIPGLITEAEIEQVRRDWPAACASLTTHARARAREIKAARRVHHDPFEPILPVLEAASPVGEYRKIADEILR RMPCRRRYARPAAEAVRAFLMIRLGLHLGFRQRNLRELLFCPRGSRPTSERQLADLRRGELRWNDQHGGWEVFAPAAAFK NAKSSFFAGRPFSMVLPDLGGLYAHIELWRECDRALLIGPATDPGTFFVKSAKRSSSTAAYNQNTFYEAWRLAIQRYGVR NPWTGRGAITGLLPHGPHSVRDVLATHVLKQTGSYEQASYAIQDTPEMVASHYGRFLPQDKAAIAAEVLNRVWADS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71990; Mature: 71859
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARESDRASDASGNGHQKRGRKPKPITAFPTALTLQWDEPETLGEALDLHTRRHGETVW CCCCCCCCCCCCCCCCCHHCCCCCCCCEECCCEEEEECCCHHHHHHHHHHHHHHCCHHHH HLARALLAQGLPVDYYTLKVWRLGRKEPATARSFEILAAIERRYRLPSGYFREKLLHRTR HHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AVRGLHHVTPSDAERRRLAWHLPDDFDQRPPAEREEILAWVREVVVSGATEYRRYQREKL HHHHHHCCCCCCHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH QHRFAFSFAASDRLSSRPAELQPPPALAEEMAAYVSFKTSTMTPRGYRRRTSWGAVSADQ HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC KSAHLGLLFGALAAAPDGPVRGAGVPRDALCFSLLVFPAVWDWYLRWREERRGFFTSWEV CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH DMLVSGALALTSPETGWLTQTPALAGRLVAIPGLITEAEIEQVRRDWPAACASLTTHARA HHHHHCCEEECCCCCCCCCCCHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RAREIKAARRVHHDPFEPILPVLEAASPVGEYRKIADEILRRMPCRRRYARPAAEAVRAF HHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHH LMIRLGLHLGFRQRNLRELLFCPRGSRPTSERQLADLRRGELRWNDQHGGWEVFAPAAAF HHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECHHHH KNAKSSFFAGRPFSMVLPDLGGLYAHIELWRECDRALLIGPATDPGTFFVKSAKRSSSTA HHCHHHHCCCCCHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCC AYNQNTFYEAWRLAIQRYGVRNPWTGRGAITGLLPHGPHSVRDVLATHVLKQTGSYEQAS CCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHC YAIQDTPEMVASHYGRFLPQDKAAIAAEVLNRVWADS CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure PARESDRASDASGNGHQKRGRKPKPITAFPTALTLQWDEPETLGEALDLHTRRHGETVW CCCCCCCCCCCCCCCCHHCCCCCCCCEECCCEEEEECCCHHHHHHHHHHHHHHCCHHHH HLARALLAQGLPVDYYTLKVWRLGRKEPATARSFEILAAIERRYRLPSGYFREKLLHRTR HHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AVRGLHHVTPSDAERRRLAWHLPDDFDQRPPAEREEILAWVREVVVSGATEYRRYQREKL HHHHHHCCCCCCHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH QHRFAFSFAASDRLSSRPAELQPPPALAEEMAAYVSFKTSTMTPRGYRRRTSWGAVSADQ HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC KSAHLGLLFGALAAAPDGPVRGAGVPRDALCFSLLVFPAVWDWYLRWREERRGFFTSWEV CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH DMLVSGALALTSPETGWLTQTPALAGRLVAIPGLITEAEIEQVRRDWPAACASLTTHARA HHHHHCCEEECCCCCCCCCCCHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RAREIKAARRVHHDPFEPILPVLEAASPVGEYRKIADEILRRMPCRRRYARPAAEAVRAF HHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHH LMIRLGLHLGFRQRNLRELLFCPRGSRPTSERQLADLRRGELRWNDQHGGWEVFAPAAAF HHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECHHHH KNAKSSFFAGRPFSMVLPDLGGLYAHIELWRECDRALLIGPATDPGTFFVKSAKRSSSTA HHCHHHHCCCCCHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCC AYNQNTFYEAWRLAIQRYGVRNPWTGRGAITGLLPHGPHSVRDVLATHVLKQTGSYEQAS CCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHC YAIQDTPEMVASHYGRFLPQDKAAIAAEVLNRVWADS CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA