| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105885
Identifier: 197105885
GI number: 197105885
Start: 2764198
End: 2765358
Strand: Reverse
Name: 197105885
Synonym: PHZ_c2424
Alternate gene names: NA
Gene position: 2765358-2764198 (Counterclockwise)
Preceding gene: 197105886
Following gene: 197105884
Centisome position: 69.2
GC content: 70.89
Gene sequence:
>1161_bases GTGGCGGTGACCGCCTGCGTCCTGATCATGATCGGCTATGGCGTCTGCGCCTTCCATGTCTCGGGACTGAAGGTGCGCGC CGACCAGGCGGCGGACAACCTCTATTACCTTGGCCTGCTCTACACTCTGACAAGCCTCGGTGTGGCCCTGATCCGGTTTA CCGGAACGGAGCTCGCGACCGAGGCCATCCTGAGCAACTTCGGGATCGCCATCTTCACGACCATCGCGGGCCTCGCCGGT CGGGTCCTCGTGGGCCAGTTCCGCGAGGATCCGGAGGACGCCGAGGAGGAGGCGCGGCTTGCGCTGTCACAGACGGTGCG CCGGATGCGCCAGGAGCTCGACCTATCCGTCGCTGAGCTGAAGAGCTTCGCGGACGCCATGCGCCAGGTGGTGGGCGAGT TCACCCAGCGGGCGAACACCTCCACGGTCGAGGCGCTGGAGCAGGCCGTCGGACAGTTCGAGCGCAGCGCCGGCGCCATG GGCGAGAAGTTCGAGGCGAGCGCGGAGCAGTTCAGCACCCGGGTGAACAGCTTCGACAGTTCCCTGGAACGGGTGGTGAG CGCGGTCGAAGGCCTGATGGACCGCATCGGCGCGGTGAAGGCGGACGCCGACGTGATCGAGCGTGGCTTGCGGCCGGCGC TGGAGACCGTGGAGCGAACCGTTGCGGCGTTCGCGGCGTCTGTGGGGCAGGAGCAGGCGAAGTTCGAGTCCGCCGCCGGC GCCCTGGAGCGCTTCAGCGAAGCCGCGAGCGGGCTCACCGAGGCCGGCAGCGCCGCGGCGTCGAGCGCGCAGGACCTGCG CACCGCTGGGGCGGCGCTCAGCGATGTGGCGCGGCTGGTGGAGCAGCTGAACGACGCTTCGTCAGCCGCAGCGGCGGCCA CCGCCGACTTCTCGCAGCGGCTGACGGCGGTCGCCGCCCAGACCGATGAGCGCAATGCCCGGTCGGTGGCGGAACTCCAC CGCGTCGCGGGCGAAGCCGCGGCGGCGGCCGGCGCCGAGGCCGAGCAGCGGCTGGCCGCGCTCGACGCGGCCGCGCGCCG GGTGATCGAGACGCTCGGGACGCTGGATCGCGAGTTCGAGGGCTCCGGCCAGGCGGTGCAGCAGGTGCGGCGGGAGCTGG CTGAGCTGGCCGGGTGGATCATCACGCGGCTTGAGAAATGA
Upstream 100 bases:
>100_bases CCAGACGCCCACCCACTATGAGAAGTGGTTCTTCCTGGCGTGCGCCGTGGTGGGCGGCGTGGTCATCGCCGCTGTCGATA TCGCCGCCTGGTCGAAGTGG
Downstream 100 bases:
>100_bases GCCGCGGCGGCATCTCGCGAGAGCATGCGAGCTACCGGAAGGGCCTGGTGCTCGGGCTGACGGTGGCCGAGTCCATGTTG CTGATCCTCTTCGCGCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MAVTACVLIMIGYGVCAFHVSGLKVRADQAADNLYYLGLLYTLTSLGVALIRFTGTELATEAILSNFGIAIFTTIAGLAG RVLVGQFREDPEDAEEEARLALSQTVRRMRQELDLSVAELKSFADAMRQVVGEFTQRANTSTVEALEQAVGQFERSAGAM GEKFEASAEQFSTRVNSFDSSLERVVSAVEGLMDRIGAVKADADVIERGLRPALETVERTVAAFAASVGQEQAKFESAAG ALERFSEAASGLTEAGSAAASSAQDLRTAGAALSDVARLVEQLNDASSAAAAATADFSQRLTAVAAQTDERNARSVAELH RVAGEAAAAAGAEAEQRLAALDAAARRVIETLGTLDREFEGSGQAVQQVRRELAELAGWIITRLEK
Sequences:
>Translated_386_residues MAVTACVLIMIGYGVCAFHVSGLKVRADQAADNLYYLGLLYTLTSLGVALIRFTGTELATEAILSNFGIAIFTTIAGLAG RVLVGQFREDPEDAEEEARLALSQTVRRMRQELDLSVAELKSFADAMRQVVGEFTQRANTSTVEALEQAVGQFERSAGAM GEKFEASAEQFSTRVNSFDSSLERVVSAVEGLMDRIGAVKADADVIERGLRPALETVERTVAAFAASVGQEQAKFESAAG ALERFSEAASGLTEAGSAAASSAQDLRTAGAALSDVARLVEQLNDASSAAAAATADFSQRLTAVAAQTDERNARSVAELH RVAGEAAAAAGAEAEQRLAALDAAARRVIETLGTLDREFEGSGQAVQQVRRELAELAGWIITRLEK >Mature_385_residues AVTACVLIMIGYGVCAFHVSGLKVRADQAADNLYYLGLLYTLTSLGVALIRFTGTELATEAILSNFGIAIFTTIAGLAGR VLVGQFREDPEDAEEEARLALSQTVRRMRQELDLSVAELKSFADAMRQVVGEFTQRANTSTVEALEQAVGQFERSAGAMG EKFEASAEQFSTRVNSFDSSLERVVSAVEGLMDRIGAVKADADVIERGLRPALETVERTVAAFAASVGQEQAKFESAAGA LERFSEAASGLTEAGSAAASSAQDLRTAGAALSDVARLVEQLNDASSAAAAATADFSQRLTAVAAQTDERNARSVAELHR VAGEAAAAAGAEAEQRLAALDAAARRVIETLGTLDREFEGSGQAVQQVRRELAELAGWIITRLEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40745; Mature: 40614
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTACVLIMIGYGVCAFHVSGLKVRADQAADNLYYLGLLYTLTSLGVALIRFTGTELAT CHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH EAILSNFGIAIFTTIAGLAGRVLVGQFREDPEDAEEEARLALSQTVRRMRQELDLSVAEL HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH KSFADAMRQVVGEFTQRANTSTVEALEQAVGQFERSAGAMGEKFEASAEQFSTRVNSFDS HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH SLERVVSAVEGLMDRIGAVKADADVIERGLRPALETVERTVAAFAASVGQEQAKFESAAG HHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALERFSEAASGLTEAGSAAASSAQDLRTAGAALSDVARLVEQLNDASSAAAAATADFSQR HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAVAAQTDERNARSVAELHRVAGEAAAAAGAEAEQRLAALDAAARRVIETLGTLDREFE HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSGQAVQQVRRELAELAGWIITRLEK CCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AVTACVLIMIGYGVCAFHVSGLKVRADQAADNLYYLGLLYTLTSLGVALIRFTGTELAT HHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH EAILSNFGIAIFTTIAGLAGRVLVGQFREDPEDAEEEARLALSQTVRRMRQELDLSVAEL HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH KSFADAMRQVVGEFTQRANTSTVEALEQAVGQFERSAGAMGEKFEASAEQFSTRVNSFDS HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH SLERVVSAVEGLMDRIGAVKADADVIERGLRPALETVERTVAAFAASVGQEQAKFESAAG HHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALERFSEAASGLTEAGSAAASSAQDLRTAGAALSDVARLVEQLNDASSAAAAATADFSQR HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAVAAQTDERNARSVAELHRVAGEAAAAAGAEAEQRLAALDAAARRVIETLGTLDREFE HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSGQAVQQVRRELAELAGWIITRLEK CCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA