BacMap

Definition	Phenylobacterium zucineum HLK1, complete genome.
Accession	NC_011144
Length	3,996,255

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The map label for this gene is 197105878

Identifier: 197105878

GI number: 197105878

Start: 2757016

End: 2757801

Strand: Reverse

Name: 197105878

Synonym: PHZ_c2417

Alternate gene names: NA

Gene position: 2757801-2757016 (Counterclockwise)

Preceding gene: 197105879

Following gene: 197105877

Centisome position: 69.01

GC content: 68.32

Gene sequence:

>786_bases
ATGGGCGGCGCCAGGGACATCGCGAACCGGCTGAGGGCGCAGCTGGACCCGACCTGGCGAACGGCCGGGCTGTCGCCCCT
GAACCGCCTGCTGGTCGGTGCGATCATTGCCTCGGTCACCTTGACAGTGATCGAAACCGAACCCGCGATCGCTTCCGGGC
GCGAGACTCTCTTTCGGGCGGCGGAACTCGCCTTCGGCGTCCTGTTCGCGGCGGAGTACGGCGCACGGCTCTGGCTGGCA
GGCCACGGTGAAGGCTCACGCTGGGCGCACCGCCTCAGCTGGATGATGAGTCCAGCGGCGCTTCTTGACCTCGCCGCGCT
GCTGCCGATGCTTATGCTGCCCGGCACGCCGGCCGCGATGCTGCGCATCCTGAGGCTCATGCGTATCGTGCGCCTCGCCC
GGCTTGGCCGCTTTTCAGCGGCCTGGACGCTGATCGCAGACGCCGTGGAGGCCCGGCGCTATGAGCTCGGCTTGAGCTTC
GGAGCGGCGCTGATCGCGATGCTGCTCGCCGCCTCGCTGCTCTACGTCGTGGAGAGTCCCTCTCAGCCGGAGGCGTTCGG
AAGCATCCCGCGGGCGCTCTGGTGGGCGGTCATGACCCTCACGACAGTCGGGTACGGCGACGTCTACCCACAGAGCTCTG
TGGGGAAGGCGTTGACCGGCGTGTTTGCGGTCGTCGGAATCGGGCTCATCGCAGCGCCGACCGGCATCCTCGCGGCGGCT
TTCAGCGACGCCTGGCGGGCGCGGACCTCGCGTAGCGGATCTGAAGAATTCAGGGAGACGAACTGA

Upstream 100 bases:

>100_bases
AAGGAGGCTTTGCGCGCCTTCCAGGCGGCGACGGGGCTGACCGCCACCGGCGCCATGGACATGGACACCCTGAACGCCCT
GGGCGTGCTGAAGTAGGCGG

Downstream 100 bases:

>100_bases
TGGCGCGGCGGCGCAAGGACCAGGGCGGCGGAATTTTCGTCCTGATTGGCTTGCTTCTTGCGGCGATCGCCTTGATCGGG
CCGTTCGTGATCGCCGGCTG

Product: possible potassium channel, VIC family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MGGARDIANRLRAQLDPTWRTAGLSPLNRLLVGAIIASVTLTVIETEPAIASGRETLFRAAELAFGVLFAAEYGARLWLA
GHGEGSRWAHRLSWMMSPAALLDLAALLPMLMLPGTPAAMLRILRLMRIVRLARLGRFSAAWTLIADAVEARRYELGLSF
GAALIAMLLAASLLYVVESPSQPEAFGSIPRALWWAVMTLTTVGYGDVYPQSSVGKALTGVFAVVGIGLIAAPTGILAAA
FSDAWRARTSRSGSEEFRETN

Sequences:

>Translated_261_residues
MGGARDIANRLRAQLDPTWRTAGLSPLNRLLVGAIIASVTLTVIETEPAIASGRETLFRAAELAFGVLFAAEYGARLWLA
GHGEGSRWAHRLSWMMSPAALLDLAALLPMLMLPGTPAAMLRILRLMRIVRLARLGRFSAAWTLIADAVEARRYELGLSF
GAALIAMLLAASLLYVVESPSQPEAFGSIPRALWWAVMTLTTVGYGDVYPQSSVGKALTGVFAVVGIGLIAAPTGILAAA
FSDAWRARTSRSGSEEFRETN
>Mature_260_residues
GGARDIANRLRAQLDPTWRTAGLSPLNRLLVGAIIASVTLTVIETEPAIASGRETLFRAAELAFGVLFAAEYGARLWLAG
HGEGSRWAHRLSWMMSPAALLDLAALLPMLMLPGTPAAMLRILRLMRIVRLARLGRFSAAWTLIADAVEARRYELGLSFG
AALIAMLLAASLLYVVESPSQPEAFGSIPRALWWAVMTLTTVGYGDVYPQSSVGKALTGVFAVVGIGLIAAPTGILAAAF
SDAWRARTSRSGSEEFRETN

Specific function: Unknown

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cyclic nucleotide-binding domain [H]

Homologues:

Organism=Homo sapiens, GI26051268, Length=233, Percent_Identity=29.1845493562232, Blast_Score=111, Evalue=7e-25,
Organism=Homo sapiens, GI26051266, Length=216, Percent_Identity=30.5555555555556, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI26051260, Length=216, Percent_Identity=30.5555555555556, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI26051262, Length=215, Percent_Identity=30.6976744186047, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI26051264, Length=220, Percent_Identity=31.3636363636364, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI236462079, Length=221, Percent_Identity=31.2217194570136, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI236461942, Length=221, Percent_Identity=31.2217194570136, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI236461719, Length=221, Percent_Identity=31.2217194570136, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI28373065, Length=221, Percent_Identity=31.2217194570136, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI32479525, Length=229, Percent_Identity=31.0043668122271, Blast_Score=104, Evalue=8e-23,
Organism=Homo sapiens, GI32479527, Length=226, Percent_Identity=31.4159292035398, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI236462242, Length=220, Percent_Identity=31.3636363636364, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI26638655, Length=221, Percent_Identity=30.316742081448, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI119395748, Length=253, Percent_Identity=25.6916996047431, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI26638653, Length=221, Percent_Identity=30.316742081448, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI4504821, Length=139, Percent_Identity=34.5323741007194, Blast_Score=98, Evalue=9e-21,
Organism=Homo sapiens, GI27436974, Length=182, Percent_Identity=29.1208791208791, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI88758565, Length=169, Percent_Identity=32.5443786982249, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI25952087, Length=134, Percent_Identity=35.8208955223881, Blast_Score=95, Evalue=5e-20,
Organism=Homo sapiens, GI4826784, Length=174, Percent_Identity=30.4597701149425, Blast_Score=94, Evalue=9e-20,
Organism=Homo sapiens, GI4758630, Length=226, Percent_Identity=29.646017699115, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI4826782, Length=172, Percent_Identity=30.8139534883721, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI4504817, Length=169, Percent_Identity=31.3609467455621, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI5031819, Length=137, Percent_Identity=34.3065693430657, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI27436981, Length=253, Percent_Identity=26.8774703557312, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI25952092, Length=163, Percent_Identity=32.5153374233129, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI20070166, Length=186, Percent_Identity=31.7204301075269, Blast_Score=88, Evalue=7e-18,
Organism=Homo sapiens, GI27436988, Length=178, Percent_Identity=35.3932584269663, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI27436986, Length=227, Percent_Identity=25.1101321585903, Blast_Score=84, Evalue=9e-17,
Organism=Homo sapiens, GI27436984, Length=229, Percent_Identity=24.8908296943231, Blast_Score=84, Evalue=9e-17,
Organism=Homo sapiens, GI25952108, Length=233, Percent_Identity=23.6051502145923, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI9789987, Length=228, Percent_Identity=25.8771929824561, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI27436993, Length=191, Percent_Identity=29.3193717277487, Blast_Score=81, Evalue=7e-16,
Organism=Homo sapiens, GI19071574, Length=191, Percent_Identity=29.3193717277487, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI21217561, Length=217, Percent_Identity=26.7281105990783, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI24497458, Length=217, Percent_Identity=26.7281105990783, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI4826786, Length=171, Percent_Identity=27.4853801169591, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI21217563, Length=217, Percent_Identity=26.7281105990783, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI163792201, Length=171, Percent_Identity=27.4853801169591, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI19424136, Length=131, Percent_Identity=30.5343511450382, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI88758576, Length=169, Percent_Identity=28.9940828402367, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI24497462, Length=169, Percent_Identity=28.9940828402367, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI45383011, Length=171, Percent_Identity=26.9005847953216, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI24497460, Length=230, Percent_Identity=25.2173913043478, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI27436996, Length=127, Percent_Identity=34.6456692913386, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI13492973, Length=187, Percent_Identity=24.5989304812834, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI32564066, Length=220, Percent_Identity=28.6363636363636, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI25147242, Length=215, Percent_Identity=29.3023255813954, Blast_Score=97, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI25147238, Length=215, Percent_Identity=29.3023255813954, Blast_Score=97, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17544122, Length=231, Percent_Identity=27.7056277056277, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71989361, Length=189, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71989381, Length=189, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71989376, Length=189, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71989369, Length=189, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71994313, Length=210, Percent_Identity=29.5238095238095, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71994134, Length=205, Percent_Identity=28.780487804878, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI71994320, Length=165, Percent_Identity=29.6969696969697, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI193206869, Length=231, Percent_Identity=24.6753246753247, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI71986574, Length=204, Percent_Identity=26.4705882352941, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17569273, Length=171, Percent_Identity=28.6549707602339, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI25148255, Length=231, Percent_Identity=24.2424242424242, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI72000220, Length=170, Percent_Identity=28.2352941176471, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI32564076, Length=170, Percent_Identity=24.7058823529412, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI32564084, Length=170, Percent_Identity=24.7058823529412, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI32564082, Length=169, Percent_Identity=24.8520710059172, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI32564090, Length=170, Percent_Identity=24.7058823529412, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI32564088, Length=170, Percent_Identity=24.7058823529412, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI32564086, Length=170, Percent_Identity=24.7058823529412, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI32564080, Length=169, Percent_Identity=24.8520710059172, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI71998749, Length=116, Percent_Identity=32.7586206896552, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI32564074, Length=116, Percent_Identity=32.7586206896552, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI115532628, Length=116, Percent_Identity=32.7586206896552, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI32564072, Length=116, Percent_Identity=32.7586206896552, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI32564070, Length=116, Percent_Identity=32.7586206896552, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI32564068, Length=116, Percent_Identity=32.7586206896552, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71986011, Length=215, Percent_Identity=26.5116279069767, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71986008, Length=215, Percent_Identity=26.5116279069767, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71986003, Length=215, Percent_Identity=26.5116279069767, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI25147245, Length=235, Percent_Identity=26.8085106382979, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71985535, Length=116, Percent_Identity=26.7241379310345, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193207406, Length=116, Percent_Identity=26.7241379310345, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281363097, Length=196, Percent_Identity=33.1632653061224, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI281363095, Length=196, Percent_Identity=33.1632653061224, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI221330119, Length=196, Percent_Identity=33.1632653061224, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI221330117, Length=196, Percent_Identity=33.1632653061224, Blast_Score=101, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24656289, Length=172, Percent_Identity=30.8139534883721, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI116007764, Length=172, Percent_Identity=30.8139534883721, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24656294, Length=172, Percent_Identity=30.8139534883721, Blast_Score=95, Evalue=6e-20,
Organism=Drosophila melanogaster, GI281365536, Length=172, Percent_Identity=30.8139534883721, Blast_Score=94, Evalue=7e-20,
Organism=Drosophila melanogaster, GI24642914, Length=199, Percent_Identity=29.6482412060301, Blast_Score=94, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24642916, Length=199, Percent_Identity=29.6482412060301, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI45555859, Length=199, Percent_Identity=29.1457286432161, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI45549143, Length=199, Percent_Identity=29.1457286432161, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24642910, Length=199, Percent_Identity=29.1457286432161, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI17737641, Length=224, Percent_Identity=25.8928571428571, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI161084970, Length=224, Percent_Identity=25.8928571428571, Blast_Score=88, Evalue=7e-18,
Organism=Drosophila melanogaster, GI161076829, Length=165, Percent_Identity=31.5151515151515, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI17136468, Length=137, Percent_Identity=32.1167883211679, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28574020, Length=137, Percent_Identity=32.1167883211679, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI221330674, Length=137, Percent_Identity=32.1167883211679, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR018488
- InterPro:   IPR000595
- InterPro:   IPR005821
- InterPro:   IPR003091
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00520 Ion_trans [H]

EC number: NA

Molecular weight: Translated: 27938; Mature: 27807

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGARDIANRLRAQLDPTWRTAGLSPLNRLLVGAIIASVTLTVIETEPAIASGRETLFRA
CCCHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHH
AELAFGVLFAAEYGARLWLAGHGEGSRWAHRLSWMMSPAALLDLAALLPMLMLPGTPAAM
HHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHH
LRILRLMRIVRLARLGRFSAAWTLIADAVEARRYELGLSFGAALIAMLLAASLLYVVESP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SQPEAFGSIPRALWWAVMTLTTVGYGDVYPQSSVGKALTGVFAVVGIGLIAAPTGILAAA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSDAWRARTSRSGSEEFRETN
HHHHHHHHHCCCCHHHHCCCC
>Mature Secondary Structure 
GGARDIANRLRAQLDPTWRTAGLSPLNRLLVGAIIASVTLTVIETEPAIASGRETLFRA
CCHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHH
AELAFGVLFAAEYGARLWLAGHGEGSRWAHRLSWMMSPAALLDLAALLPMLMLPGTPAAM
HHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHH
LRILRLMRIVRLARLGRFSAAWTLIADAVEARRYELGLSFGAALIAMLLAASLLYVVESP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SQPEAFGSIPRALWWAVMTLTTVGYGDVYPQSSVGKALTGVFAVVGIGLIAAPTGILAAA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSDAWRARTSRSGSEEFRETN
HHHHHHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1522059 [H]