Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is narP [C]

Identifier: 197105871

GI number: 197105871

Start: 2744151

End: 2746631

Strand: Direct

Name: narP [C]

Synonym: PHZ_c2410

Alternate gene names: 197105871

Gene position: 2744151-2746631 (Clockwise)

Preceding gene: 197105858

Following gene: 197105872

Centisome position: 68.67

GC content: 68.32

Gene sequence:

>2481_bases
ATGACCGATGCCGAGGCTGGCGCGCGCAAGGCTGCGTCGCTTGCAGGCCCCCTCAGCAGCACCCCTGGCATCGTCGTTCT
CTGCGCGCCGCCCGGCTTCGGCAAGTCAGAGGTGCTCACGCGGGCTCAGGGACTGATCCAGAACACGCCATCGGCGTCGA
TCCGTCGTTTCGACCGTGCGCAGCATCGCCTCGCCCCAGACGCGGCCGCCGAAGCCATCCTGCAGGCCGGCGCCGATCAG
CTGATCATCGTCGATGGTCTGCAGGGCGCGGATCGCGGCGCAATTTCAGAGGCGCTGTCGGTCCGCTTCCCGTCCCAGGA
CGCGCCGCGACTGTGGTTGTCCATCCACCATCTGAAAGACCTGGCGCTGGCGCGGCTGGTCGCTGATGGCGCGGCGACGA
TCATCGACTGGCGCAGCCTGAAGCTCAGCGACGGCGAGCTTCGCCTCCGGCTGGCCCGCGTCCCGCCGCGGTTCAAGCGT
GTGGTCGGAGACCTCGGCCGCGCCTGGCCTGCCGCCTGCTCCCTCCTTAGCAGGTGGGCGCAGCAGGCGCCGCCCGACGA
GGCGGACTGGGAGGTCCCGGCTATCCTCGCGGCCTCAGGCCTTGATGGATACATCGAACAGGAAATCGCCCCGGTGCTCT
CAAGCGAGGAGCTTGAGGCCCTGATCCATGCGAGCATCACCGAGACCATCGAGGTCGACGCCGACCGGCGAGGTGTGACG
CGATCGCACGAACAGCAGGCCATCATGCGTGCAAGTTCAAAGATCGCCGGGCTGATCGAGCGCCAGGGCAGCAAGCTGAT
CGTCCAGCCCGCGCTGCGTCACTGGCTGACGACGCGCTTCGAAGAACTTCCCAGCCATCGACAGGTCGAGTCCCTCGCGC
ACGCCGCGCGCGAGTTCGAGGGTCGGGGCGACCTGGTCGTCGCGGCGCGTCTGTTTCGCAGCGCCGGTCGCGAGGCGGAG
ATCGAACGGCTCATCGCCGACCGAGGCTCCCTGCTGATCTGGATGACGCACGGCTTCCCGGCGATCCGCGAACTTGTCGA
TCAGGCGGGCGATATTCTCCTCTCGCGGTCGCCCATCCTGCAGCTGATGCGCTGCATCGTCCTCATGAAGACGGGCCGGA
TCTCCGAAGCCCAGGAGCTGTTCGCAACGATAGACGCCGACGCCTGCGCCCAGACGCCCAGTCTGGAGCGCGATCATGAA
GTCGTGCGGATCACGCTCCTGACCTATGGGTGCGTCCTGCAGCGCGACACCGACCTCGATCGCTTCCACGCCATCGTCGC
CCGGTCGGTCGACGAGCCGGACTGGAAATCGCTCCTCTCCACCCTCGCCTGCATTCTGCACACGCAGCGGGCGCGCTTCG
ATTCCGCCCTGGCCAATCTCATCGACGCCCGGGTGCACGCCCGAAGCGCGGACTCCCGGTACAACCTGTTGTTTCTGTCC
CTCCACGAGGCGAACATTCACCTCGCCCAGGGCGACCTCAAGAAGGCGCGAGCGGCTCTCAATGACGCCCGGCGCCGGTG
GCGGCAGGAGTTCCCCGAAGACCGCGGCGCCGAGACCGTCATGTCAGCGCTCGCCGCCTCACTGGAGTACGAGCTGGGCC
AGCTCTCAAGCGCGCGCGCGTCGGTGCGGAAGTCGGCCTACCGCATGCCGGACTCCGAAGCCTGGTTCGATGTCTACGCC
GCCGCCTACGAGCCCATGGCGCGACTGATCGCCGTGGACCATGGCCTGGGGCCCGCGATCGAAGCCCTGGCGGATCAGAG
ACGCAGGCTGATCGCTCAGGGTCTGCCCCGGGTCGCGGCCCTGCTGCAGAACCTCGCCATCATCCTCGCCGGCGAGGCGT
GGCTCCGCACGGGAAGCGCCCCGCCAGATCCCCCCGGGGATCTCGCGCCCCTGGACGTCGCTCCGAGCTGGCAGGAAGAG
GAAGCCCATCACCTCGCCAGAGCCTGGCTTCGATGGCGGCAGGGTGACGCCGCCGCAGCGGTGCGCGGCCTGCGCGAGGT
TTCCGAGAGTAGCGAAAGCCGCAGGCTCGCCCGCTCCACCCTGCGCTACCAGCTCGCGCTCGCGGCCTTCGCTGCGCACG
AGAGCAATCCGGACGCCGATGCGGAACTGCGCCGGGCCATCGTCCTGGCGGCGGACCTGGGTGCGCGGCAGGCCGTACAG
CATGTCATGAGCCCTGTCGTCGCCCGCGCGGTCGCCCGGCTCGGAGAGGCCGCGCCTGCGCGCTCAGACCTGAAGCGCTT
TATCAGCACGTTGCAGAGCTCAAGTCGCGCGGCGGAGGGCTCGAAACATCCCCTGCTCTCGGCGCGCGAGATCGACGTTC
TCAAGGCCCTTTCCGAGGGCGGAAGCGACAAGGTCATCGGACGCATGCTCGACATGAGCGAGCACGGGGTCCGCTTCCAT
CTGAAGAGCATCTATCGAAAGCTCAGCGTCCACGACCGGCTCGCCGCCGTTCACCGGGCGAAGGAGCTGAGCGCCATCTG
A

Upstream 100 bases:

>100_bases
AACTACCAATACGAGTAGTACTGGTTGGCGCCACGCGGGACGTCCGGCATGGCTGGAGGCGCGACATGAGCGCAGGCCCG
AGGAGCGCGCAGTGCGAACC

Downstream 100 bases:

>100_bases
GCTACGCATTTTAGTAGTCTCTGCGCATGCGGCGCACCTCAGCGACTACCAGGTAGATCCATCCCCCTCCTAAGCGCTGT
CGTTGCCCCTCCCCGACGCT

Product: transcriptional regulator, AraC type

Products: NA

Alternate protein names: LuxR Family Transcriptional Regulator; Transcriptional Regulator AraC Type

Number of amino acids: Translated: 826; Mature: 825

Protein sequence:

>826_residues
MTDAEAGARKAASLAGPLSSTPGIVVLCAPPGFGKSEVLTRAQGLIQNTPSASIRRFDRAQHRLAPDAAAEAILQAGADQ
LIIVDGLQGADRGAISEALSVRFPSQDAPRLWLSIHHLKDLALARLVADGAATIIDWRSLKLSDGELRLRLARVPPRFKR
VVGDLGRAWPAACSLLSRWAQQAPPDEADWEVPAILAASGLDGYIEQEIAPVLSSEELEALIHASITETIEVDADRRGVT
RSHEQQAIMRASSKIAGLIERQGSKLIVQPALRHWLTTRFEELPSHRQVESLAHAAREFEGRGDLVVAARLFRSAGREAE
IERLIADRGSLLIWMTHGFPAIRELVDQAGDILLSRSPILQLMRCIVLMKTGRISEAQELFATIDADACAQTPSLERDHE
VVRITLLTYGCVLQRDTDLDRFHAIVARSVDEPDWKSLLSTLACILHTQRARFDSALANLIDARVHARSADSRYNLLFLS
LHEANIHLAQGDLKKARAALNDARRRWRQEFPEDRGAETVMSALAASLEYELGQLSSARASVRKSAYRMPDSEAWFDVYA
AAYEPMARLIAVDHGLGPAIEALADQRRRLIAQGLPRVAALLQNLAIILAGEAWLRTGSAPPDPPGDLAPLDVAPSWQEE
EAHHLARAWLRWRQGDAAAAVRGLREVSESSESRRLARSTLRYQLALAAFAAHESNPDADAELRRAIVLAADLGARQAVQ
HVMSPVVARAVARLGEAAPARSDLKRFISTLQSSSRAAEGSKHPLLSAREIDVLKALSEGGSDKVIGRMLDMSEHGVRFH
LKSIYRKLSVHDRLAAVHRAKELSAI

Sequences:

>Translated_826_residues
MTDAEAGARKAASLAGPLSSTPGIVVLCAPPGFGKSEVLTRAQGLIQNTPSASIRRFDRAQHRLAPDAAAEAILQAGADQ
LIIVDGLQGADRGAISEALSVRFPSQDAPRLWLSIHHLKDLALARLVADGAATIIDWRSLKLSDGELRLRLARVPPRFKR
VVGDLGRAWPAACSLLSRWAQQAPPDEADWEVPAILAASGLDGYIEQEIAPVLSSEELEALIHASITETIEVDADRRGVT
RSHEQQAIMRASSKIAGLIERQGSKLIVQPALRHWLTTRFEELPSHRQVESLAHAAREFEGRGDLVVAARLFRSAGREAE
IERLIADRGSLLIWMTHGFPAIRELVDQAGDILLSRSPILQLMRCIVLMKTGRISEAQELFATIDADACAQTPSLERDHE
VVRITLLTYGCVLQRDTDLDRFHAIVARSVDEPDWKSLLSTLACILHTQRARFDSALANLIDARVHARSADSRYNLLFLS
LHEANIHLAQGDLKKARAALNDARRRWRQEFPEDRGAETVMSALAASLEYELGQLSSARASVRKSAYRMPDSEAWFDVYA
AAYEPMARLIAVDHGLGPAIEALADQRRRLIAQGLPRVAALLQNLAIILAGEAWLRTGSAPPDPPGDLAPLDVAPSWQEE
EAHHLARAWLRWRQGDAAAAVRGLREVSESSESRRLARSTLRYQLALAAFAAHESNPDADAELRRAIVLAADLGARQAVQ
HVMSPVVARAVARLGEAAPARSDLKRFISTLQSSSRAAEGSKHPLLSAREIDVLKALSEGGSDKVIGRMLDMSEHGVRFH
LKSIYRKLSVHDRLAAVHRAKELSAI
>Mature_825_residues
TDAEAGARKAASLAGPLSSTPGIVVLCAPPGFGKSEVLTRAQGLIQNTPSASIRRFDRAQHRLAPDAAAEAILQAGADQL
IIVDGLQGADRGAISEALSVRFPSQDAPRLWLSIHHLKDLALARLVADGAATIIDWRSLKLSDGELRLRLARVPPRFKRV
VGDLGRAWPAACSLLSRWAQQAPPDEADWEVPAILAASGLDGYIEQEIAPVLSSEELEALIHASITETIEVDADRRGVTR
SHEQQAIMRASSKIAGLIERQGSKLIVQPALRHWLTTRFEELPSHRQVESLAHAAREFEGRGDLVVAARLFRSAGREAEI
ERLIADRGSLLIWMTHGFPAIRELVDQAGDILLSRSPILQLMRCIVLMKTGRISEAQELFATIDADACAQTPSLERDHEV
VRITLLTYGCVLQRDTDLDRFHAIVARSVDEPDWKSLLSTLACILHTQRARFDSALANLIDARVHARSADSRYNLLFLSL
HEANIHLAQGDLKKARAALNDARRRWRQEFPEDRGAETVMSALAASLEYELGQLSSARASVRKSAYRMPDSEAWFDVYAA
AYEPMARLIAVDHGLGPAIEALADQRRRLIAQGLPRVAALLQNLAIILAGEAWLRTGSAPPDPPGDLAPLDVAPSWQEEE
AHHLARAWLRWRQGDAAAAVRGLREVSESSESRRLARSTLRYQLALAAFAAHESNPDADAELRRAIVLAADLGARQAVQH
VMSPVVARAVARLGEAAPARSDLKRFISTLQSSSRAAEGSKHPLLSAREIDVLKALSEGGSDKVIGRMLDMSEHGVRFHL
KSIYRKLSVHDRLAAVHRAKELSAI

Specific function: This Protein Activates The Expression Of The Nitrate Reductase (Narghji) And Formate Dehydrogenase-N (Fdnghi) Operons And Represses The Transcription Of The Fumarate Reductase (Frdabcd) Operon In Response To A Nitrate/Nitrite Induction Signal Transmitted

COG id: COG2909

COG function: function code K; ATP-dependent transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90366; Mature: 90235

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAEAGARKAASLAGPLSSTPGIVVLCAPPGFGKSEVLTRAQGLIQNTPSASIRRFDRA
CCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
QHRLAPDAAAEAILQAGADQLIIVDGLQGADRGAISEALSVRFPSQDAPRLWLSIHHLKD
HHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LALARLVADGAATIIDWRSLKLSDGELRLRLARVPPRFKRVVGDLGRAWPAACSLLSRWA
HHHHHHHHCCCHHEEECCCEEECCCCEEEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHH
QQAPPDEADWEVPAILAASGLDGYIEQEIAPVLSSEELEALIHASITETIEVDADRRGVT
HHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHEEECCCCCCCC
RSHEQQAIMRASSKIAGLIERQGSKLIVQPALRHWLTTRFEELPSHRQVESLAHAAREFE
HHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
GRGDLVVAARLFRSAGREAEIERLIADRGSLLIWMTHGFPAIRELVDQAGDILLSRSPIL
CCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHEEECCCHHH
QLMRCIVLMKTGRISEAQELFATIDADACAQTPSLERDHEVVRITLLTYGCVLQRDTDLD
HHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCCCCCCCHHEEEHHHHHHHHHCCCCCHH
RFHAIVARSVDEPDWKSLLSTLACILHTQRARFDSALANLIDARVHARSADSRYNLLFLS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
LHEANIHLAQGDLKKARAALNDARRRWRQEFPEDRGAETVMSALAASLEYELGQLSSARA
EECCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SVRKSAYRMPDSEAWFDVYAAAYEPMARLIAVDHGLGPAIEALADQRRRLIAQGLPRVAA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHH
LLQNLAIILAGEAWLRTGSAPPDPPGDLAPLDVAPSWQEEEAHHLARAWLRWRQGDAAAA
HHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH
VRGLREVSESSESRRLARSTLRYQLALAAFAAHESNPDADAELRRAIVLAADLGARQAVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHH
HVMSPVVARAVARLGEAAPARSDLKRFISTLQSSSRAAEGSKHPLLSAREIDVLKALSEG
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
GSDKVIGRMLDMSEHGVRFHLKSIYRKLSVHDRLAAVHRAKELSAI
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDAEAGARKAASLAGPLSSTPGIVVLCAPPGFGKSEVLTRAQGLIQNTPSASIRRFDRA
CCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
QHRLAPDAAAEAILQAGADQLIIVDGLQGADRGAISEALSVRFPSQDAPRLWLSIHHLKD
HHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LALARLVADGAATIIDWRSLKLSDGELRLRLARVPPRFKRVVGDLGRAWPAACSLLSRWA
HHHHHHHHCCCHHEEECCCEEECCCCEEEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHH
QQAPPDEADWEVPAILAASGLDGYIEQEIAPVLSSEELEALIHASITETIEVDADRRGVT
HHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHEEECCCCCCCC
RSHEQQAIMRASSKIAGLIERQGSKLIVQPALRHWLTTRFEELPSHRQVESLAHAAREFE
HHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
GRGDLVVAARLFRSAGREAEIERLIADRGSLLIWMTHGFPAIRELVDQAGDILLSRSPIL
CCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHEEECCCHHH
QLMRCIVLMKTGRISEAQELFATIDADACAQTPSLERDHEVVRITLLTYGCVLQRDTDLD
HHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCCCCCCCHHEEEHHHHHHHHHCCCCCHH
RFHAIVARSVDEPDWKSLLSTLACILHTQRARFDSALANLIDARVHARSADSRYNLLFLS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
LHEANIHLAQGDLKKARAALNDARRRWRQEFPEDRGAETVMSALAASLEYELGQLSSARA
EECCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SVRKSAYRMPDSEAWFDVYAAAYEPMARLIAVDHGLGPAIEALADQRRRLIAQGLPRVAA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHH
LLQNLAIILAGEAWLRTGSAPPDPPGDLAPLDVAPSWQEEEAHHLARAWLRWRQGDAAAA
HHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH
VRGLREVSESSESRRLARSTLRYQLALAAFAAHESNPDADAELRRAIVLAADLGARQAVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHH
HVMSPVVARAVARLGEAAPARSDLKRFISTLQSSSRAAEGSKHPLLSAREIDVLKALSEG
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
GSDKVIGRMLDMSEHGVRFHLKSIYRKLSVHDRLAAVHRAKELSAI
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA