| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is ilvE [H]
Identifier: 197105824
GI number: 197105824
Start: 2674808
End: 2675881
Strand: Reverse
Name: ilvE [H]
Synonym: PHZ_c2362
Alternate gene names: 197105824
Gene position: 2675881-2674808 (Counterclockwise)
Preceding gene: 197105825
Following gene: 197105823
Centisome position: 66.96
GC content: 68.9
Gene sequence:
>1074_bases ATGCAGACCATCGTTGAACGTCATCCCGGCCTCACGCCGCCAGATCGCCGCGCCGAGCTGCTCCGAGAGCCAGGGTTCGG GAAGGTGTTCACGGACCACATGGCCATGGCCTGGTGGCGCGACGGGGAGTGGACCGCGCCCCGCATCACGCCGCGTCGGC CGCTGGCGCTCGATCCGGCCGCTGCGGTCCTGCACTACGCCCAGGAAATCTTCGAAGGCATGAAGGCCTATCGGACGGAG GAGGGCGAAGTGCTGCTCTTTCGGCCCGAGGTCAACGCCAAGCGGTTCGCCCGATCGGCGGAGCGCATGGCGATGCCGCA GGTCCCTGAGGCGCTGTTCAGCGCGGCGGTGGAGGCGCTCATCCGGACGGATCGCGACTGGATCCCCTCCGGCGAAGGCA GTCTCTATCTGCGTCCGTTCATGATCGCCACCGAAGCCTTCCTCGGCGTTCGGCCGGCGACCGAGTATCTGTTCTGCGTG CTGGCTTGCCCGGTCGGCGCCTACTTCAAGGGCGGCGCCAAGCCGGTCACGGTGTGGGCGTCGACCACCTTCACGCGCGC CGCCGCCGGCGGAACGGGCGCGGCCAAGTGCGGCGGCAATTACGCCGGAAGCCTCATCGCTCAGGCGGAGGCGATCCGGC ACGGTTGCGACCAGGTGGTCTTCCTCGACGCGGCAGAACACCGCTGGATCGAGGAGCTTGGCGGCATGAACGTGTTCTTC CTGGTGGACGGCACGCTGATCACGCCCCCGCTGACCGGCACCATCCTGGAAGGGGTGACGCGCAGCAGCCTCCTGACCCT CGCCCGGGAAGAAGGGCTGAAGGTTGAGGAAAGGCCGTATGACTTCGAGACGCTGAAGGCCGATGCCGCCAGCGGCCGCC TGACCGAAGCGTTCGCCTGCGGTACGGCGGCGGTGGTGGCGGCGATCGGGGAAGTGCGCCACGCCGCGGGGGCGTTCGCC ATCGCCGGCGGGGTGGAAGGTCCGGTGACGAGCACGTTGCGGCGGCGACTTACGGACATCCAGCGGGGGCAGGCTCCCGA TCCTCACGGCTGGACGCGCCGCGTTCAATTGTGA
Upstream 100 bases:
>100_bases TGGCGGTCGAGCTGGTCTGACGGGAGGGAGCCCGCCGTCGGGCGCGCCGCTTCCAGCCGAACCTTACGAACACACCTAAC GCGCCTCGAGGGGATCCCAG
Downstream 100 bases:
>100_bases GCCCCAGTTCGCCACGGCGTCGAAGACACTCGCTGCACCCGCCGGCTCCAGTCCACGAGGTTCCTGTGAGGGCCCGCACA CCTGCCCCGCGCCGCATAGA
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MQTIVERHPGLTPPDRRAELLREPGFGKVFTDHMAMAWWRDGEWTAPRITPRRPLALDPAAAVLHYAQEIFEGMKAYRTE EGEVLLFRPEVNAKRFARSAERMAMPQVPEALFSAAVEALIRTDRDWIPSGEGSLYLRPFMIATEAFLGVRPATEYLFCV LACPVGAYFKGGAKPVTVWASTTFTRAAAGGTGAAKCGGNYAGSLIAQAEAIRHGCDQVVFLDAAEHRWIEELGGMNVFF LVDGTLITPPLTGTILEGVTRSSLLTLAREEGLKVEERPYDFETLKADAASGRLTEAFACGTAAVVAAIGEVRHAAGAFA IAGGVEGPVTSTLRRRLTDIQRGQAPDPHGWTRRVQL
Sequences:
>Translated_357_residues MQTIVERHPGLTPPDRRAELLREPGFGKVFTDHMAMAWWRDGEWTAPRITPRRPLALDPAAAVLHYAQEIFEGMKAYRTE EGEVLLFRPEVNAKRFARSAERMAMPQVPEALFSAAVEALIRTDRDWIPSGEGSLYLRPFMIATEAFLGVRPATEYLFCV LACPVGAYFKGGAKPVTVWASTTFTRAAAGGTGAAKCGGNYAGSLIAQAEAIRHGCDQVVFLDAAEHRWIEELGGMNVFF LVDGTLITPPLTGTILEGVTRSSLLTLAREEGLKVEERPYDFETLKADAASGRLTEAFACGTAAVVAAIGEVRHAAGAFA IAGGVEGPVTSTLRRRLTDIQRGQAPDPHGWTRRVQL >Mature_357_residues MQTIVERHPGLTPPDRRAELLREPGFGKVFTDHMAMAWWRDGEWTAPRITPRRPLALDPAAAVLHYAQEIFEGMKAYRTE EGEVLLFRPEVNAKRFARSAERMAMPQVPEALFSAAVEALIRTDRDWIPSGEGSLYLRPFMIATEAFLGVRPATEYLFCV LACPVGAYFKGGAKPVTVWASTTFTRAAAGGTGAAKCGGNYAGSLIAQAEAIRHGCDQVVFLDAAEHRWIEELGGMNVFF LVDGTLITPPLTGTILEGVTRSSLLTLAREEGLKVEERPYDFETLKADAASGRLTEAFACGTAAVVAAIGEVRHAAGAFA IAGGVEGPVTSTLRRRLTDIQRGQAPDPHGWTRRVQL
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI50658084, Length=327, Percent_Identity=41.2844036697248, Blast_Score=244, Evalue=6e-65, Organism=Homo sapiens, GI38176287, Length=329, Percent_Identity=41.6413373860182, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI296010906, Length=329, Percent_Identity=41.6413373860182, Blast_Score=242, Evalue=3e-64, Organism=Homo sapiens, GI296010904, Length=337, Percent_Identity=41.2462908011869, Blast_Score=242, Evalue=4e-64, Organism=Homo sapiens, GI296010902, Length=329, Percent_Identity=37.9939209726444, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI296010900, Length=329, Percent_Identity=37.9939209726444, Blast_Score=195, Evalue=6e-50, Organism=Homo sapiens, GI258614015, Length=284, Percent_Identity=39.4366197183099, Blast_Score=194, Evalue=9e-50, Organism=Escherichia coli, GI48994963, Length=299, Percent_Identity=33.7792642140468, Blast_Score=125, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17568601, Length=347, Percent_Identity=39.7694524495677, Blast_Score=220, Evalue=7e-58, Organism=Caenorhabditis elegans, GI17565728, Length=349, Percent_Identity=37.2492836676218, Blast_Score=201, Evalue=5e-52, Organism=Saccharomyces cerevisiae, GI6322608, Length=359, Percent_Identity=40.3899721448468, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6322002, Length=366, Percent_Identity=39.8907103825137, Blast_Score=229, Evalue=6e-61, Organism=Drosophila melanogaster, GI24641779, Length=346, Percent_Identity=38.728323699422, Blast_Score=228, Evalue=5e-60,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 38811; Mature: 38811
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTIVERHPGLTPPDRRAELLREPGFGKVFTDHMAMAWWRDGEWTAPRITPRRPLALDPA CCCHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHEEEECCCCCCCCCCCCCCCCCCHH AAVLHYAQEIFEGMKAYRTEEGEVLLFRPEVNAKRFARSAERMAMPQVPEALFSAAVEAL HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH IRTDRDWIPSGEGSLYLRPFMIATEAFLGVRPATEYLFCVLACPVGAYFKGGAKPVTVWA HHCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHCCCCCEEEEEE STTFTRAAAGGTGAAKCGGNYAGSLIAQAEAIRHGCDQVVFLDAAEHRWIEELGGMNVFF CCCHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCEEEE LVDGTLITPPLTGTILEGVTRSSLLTLAREEGLKVEERPYDFETLKADAASGRLTEAFAC EECCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCHHHHHHH GTAAVVAAIGEVRHAAGAFAIAGGVEGPVTSTLRRRLTDIQRGQAPDPHGWTRRVQL HHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCC >Mature Secondary Structure MQTIVERHPGLTPPDRRAELLREPGFGKVFTDHMAMAWWRDGEWTAPRITPRRPLALDPA CCCHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHEEEECCCCCCCCCCCCCCCCCCHH AAVLHYAQEIFEGMKAYRTEEGEVLLFRPEVNAKRFARSAERMAMPQVPEALFSAAVEAL HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH IRTDRDWIPSGEGSLYLRPFMIATEAFLGVRPATEYLFCVLACPVGAYFKGGAKPVTVWA HHCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHCCCCCEEEEEE STTFTRAAAGGTGAAKCGGNYAGSLIAQAEAIRHGCDQVVFLDAAEHRWIEELGGMNVFF CCCHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCEEEE LVDGTLITPPLTGTILEGVTRSSLLTLAREEGLKVEERPYDFETLKADAASGRLTEAFAC EECCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCHHHHHHH GTAAVVAAIGEVRHAAGAFAIAGGVEGPVTSTLRRRLTDIQRGQAPDPHGWTRRVQL HHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]