| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is cysD [H]
Identifier: 197105725
GI number: 197105725
Start: 2565228
End: 2566181
Strand: Direct
Name: cysD [H]
Synonym: PHZ_c2263
Alternate gene names: 197105725
Gene position: 2565228-2566181 (Clockwise)
Preceding gene: 197105719
Following gene: 197105726
Centisome position: 64.19
GC content: 66.35
Gene sequence:
>954_bases ATGGACGCCCGCGTCCTGACCCGCTCAACGATCTCCGAAGGCGCTGTGCCCCGCCAGACGCTCACCCACCTGCAGCGGCT CGAGGCCGAGAGCATCCACATCATGCGCGAGGTCGTCGCCGAGTGCGAACGGCCGGTGATGCTCTACTCGATCGGCAAGG ACTCGGCCGTGATGCTGCACTTGGCGGCTAAGGCCTTCTATCCTTCCAAACCGCCGTTCCCGCTGCTGCACGTCGACACG ACCTGGAAGTTCCGGGCGATGTACGAGATGCGCGAACGCATGGCCAAGGAGCTCGGCTTCGAGCTGCTGGTCCACAAGAA CCCGGACGCCGTCGCCCAGGGCGTCAATCCCTTCACCCACGGCAGCGCGGTCCACACGGACGTCTGGAAGACCGAGGGGC TGAAGCAGGCGCTGGACAAGTACGGCTTCGACGCGGCCTTCGGCGGCGCCCGCCGCGACGAGGAGAAGTCCCGCGCCAAG GAACGGATCTTCTCGTTCCGGTCGGCCCAGCATCGCTGGGATCCCAAGAACCAGCGGCCCGAGCTCTGGCGGCTCTACAA CGCGCGCAAGAACCCCGGCGAGAGCATCCGGGTGTTCCCTCTGTCGAATTGGACCGAGCTCGACATCTGGCAATACATCT ATCTCGAGCAGATCCCGATCGTGCCGCTCTACTTCGCCGCCGAGCGACCGGTGGTGGAGCGTGACGGGACGCTCATCATG GTCGACGACGAGCGCTTCCCCCTGCGCGAGGGCGAGAGCCCGCAGATGCGCTCGGTCCGGTTCCGCACCCTCGGCTGCTA CCCGCTGACCGGCGCCGTCGAGAGCACGGCGGCCACCCTGCCGCAGATCATCCAGGAGATGCTGCTCACCACCACGTCCG AGCGCCAGGGCCGGGTCATCGACCACGACCAGTCCGCCTCGATGGAGAAGAAGAAGCAGGAGGGCTACTTCTGA
Upstream 100 bases:
>100_bases CCTTGCGCCGCGCCCGGGCGGCGGCTAACTCGCGATCCAGGGCCGGCCCGGGCGCGCGCACGCGCACGGGAATATTCACT CTTTGATGTAAGGTCCGCTC
Downstream 100 bases:
>100_bases TGGCCCACCAGTCCGCCCTCATCGCCGAGGACATCGAGGCCTACCTGAAGCAGCACGAGGTGAAGAGCCTGCTGCGCTTC ATCACCTGCGGCTCGGTGGA
Product: sulfate adenylyltransferase subunit 2
Products: NA
Alternate protein names: ATP-sulfurylase small subunit; Sulfate adenylate transferase; SAT [H]
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MDARVLTRSTISEGAVPRQTLTHLQRLEAESIHIMREVVAECERPVMLYSIGKDSAVMLHLAAKAFYPSKPPFPLLHVDT TWKFRAMYEMRERMAKELGFELLVHKNPDAVAQGVNPFTHGSAVHTDVWKTEGLKQALDKYGFDAAFGGARRDEEKSRAK ERIFSFRSAQHRWDPKNQRPELWRLYNARKNPGESIRVFPLSNWTELDIWQYIYLEQIPIVPLYFAAERPVVERDGTLIM VDDERFPLREGESPQMRSVRFRTLGCYPLTGAVESTAATLPQIIQEMLLTTTSERQGRVIDHDQSASMEKKKQEGYF
Sequences:
>Translated_317_residues MDARVLTRSTISEGAVPRQTLTHLQRLEAESIHIMREVVAECERPVMLYSIGKDSAVMLHLAAKAFYPSKPPFPLLHVDT TWKFRAMYEMRERMAKELGFELLVHKNPDAVAQGVNPFTHGSAVHTDVWKTEGLKQALDKYGFDAAFGGARRDEEKSRAK ERIFSFRSAQHRWDPKNQRPELWRLYNARKNPGESIRVFPLSNWTELDIWQYIYLEQIPIVPLYFAAERPVVERDGTLIM VDDERFPLREGESPQMRSVRFRTLGCYPLTGAVESTAATLPQIIQEMLLTTTSERQGRVIDHDQSASMEKKKQEGYF >Mature_317_residues MDARVLTRSTISEGAVPRQTLTHLQRLEAESIHIMREVVAECERPVMLYSIGKDSAVMLHLAAKAFYPSKPPFPLLHVDT TWKFRAMYEMRERMAKELGFELLVHKNPDAVAQGVNPFTHGSAVHTDVWKTEGLKQALDKYGFDAAFGGARRDEEKSRAK ERIFSFRSAQHRWDPKNQRPELWRLYNARKNPGESIRVFPLSNWTELDIWQYIYLEQIPIVPLYFAAERPVVERDGTLIM VDDERFPLREGESPQMRSVRFRTLGCYPLTGAVESTAATLPQIIQEMLLTTTSERQGRVIDHDQSASMEKKKQEGYF
Specific function: First step in the sulfate activation pathway. This reaction occurs early in the reductive branch of the cysteine biosynthetic pathway. [C]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789109, Length=297, Percent_Identity=76.0942760942761, Blast_Score=474, Evalue=1e-135,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002500 - InterPro: IPR014729 - InterPro: IPR011784 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =2.7.7.4 [H]
Molecular weight: Translated: 36571; Mature: 36571
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDARVLTRSTISEGAVPRQTLTHLQRLEAESIHIMREVVAECERPVMLYSIGKDSAVMLH CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEE LAAKAFYPSKPPFPLLHVDTTWKFRAMYEMRERMAKELGFELLVHKNPDAVAQGVNPFTH EHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHCCCCCCC GSAVHTDVWKTEGLKQALDKYGFDAAFGGARRDEEKSRAKERIFSFRSAQHRWDPKNQRP CCCEEHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC ELWRLYNARKNPGESIRVFPLSNWTELDIWQYIYLEQIPIVPLYFAAERPVVERDGTLIM HHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEECCCEEEE VDDERFPLREGESPQMRSVRFRTLGCYPLTGAVESTAATLPQIIQEMLLTTTSERQGRVI ECCCCCCCCCCCCCCHHHEEEEEECCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEE DHDQSASMEKKKQEGYF CCCCHHHHHHHHHCCCC >Mature Secondary Structure MDARVLTRSTISEGAVPRQTLTHLQRLEAESIHIMREVVAECERPVMLYSIGKDSAVMLH CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEE LAAKAFYPSKPPFPLLHVDTTWKFRAMYEMRERMAKELGFELLVHKNPDAVAQGVNPFTH EHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHCCCCCCC GSAVHTDVWKTEGLKQALDKYGFDAAFGGARRDEEKSRAKERIFSFRSAQHRWDPKNQRP CCCEEHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC ELWRLYNARKNPGESIRVFPLSNWTELDIWQYIYLEQIPIVPLYFAAERPVVERDGTLIM HHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEECCCEEEE VDDERFPLREGESPQMRSVRFRTLGCYPLTGAVESTAATLPQIIQEMLLTTTSERQGRVI ECCCCCCCCCCCCCCHHHEEEEEECCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEE DHDQSASMEKKKQEGYF CCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]