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The map label for this gene is cirA [C]

Identifier: 197105697

GI number: 197105697

Start: 2528478

End: 2530883

Strand: Direct

Name: cirA [C]

Synonym: PHZ_c2235

Alternate gene names: 197105697

Gene position: 2528478-2530883 (Clockwise)

Preceding gene: 197105696

Following gene: 197105698

Centisome position: 63.27

GC content: 72.73

Gene sequence:

>2406_bases
GTGCCTCTACGGGCGTTGCTGGCCGGCGGCCTCGTCGCGTGCGTCGCGACGGCCGCTGAGGCCGCGGGCGCGCGCCATCG
CCTGTCGATCTCCCCCAAGTCCTACGCCGACGCCCTGATCGACCTGGGGATCCAGGCGAACGTCTCGATCGTCGGCACAT
CGGCCTGCGGCCGCGGCGGGCCCGTGGCCCTGCAGGGCCGCTACACCGTCGAGGAGGCCCTCGCCCGGCTTCTGGACGGC
GCGCCGTGCCAGTTCCGCATCGTCGATGCGCGGACGGTCCGCATCACCCCCGCCCCCACGCCTGCGGCTCCGCCCGTCGA
GCGGCCGCCGGCCGACCAGCCGATGCTGGTGTCCGAACTCGTCGTGACAGCGGCCAAGCGCCCGGCCAGCCTCGATCTGC
TGCCGGCCGGCGTCAGCGCCGTCTCCCGCGCCCAGATCGCCGCCACTGGCGCAGGCGACGTCGGCCAGACCATCGGCCAG
GTGGCCGGCGTGCTGACCACCAACCTCGGCCCCGGCCGCGACAAGCTGCTGATCCGCGCGCTCTCGGACGGGACGTTCAC
CGGCCGCGCCCGTTCGACGGTCAGCACCTACCTCGACCACGCGCCCCTCAACTACAACGCCCCGGACCCCGACCTGCGGC
TCGTGGACATCGAGCGCATCGAGGTCGTCCGCGGCCCGCAAGGGGCGCTCTACGGATCGGGCTCGCTGTCGGGCGTCTAT
CGCATCATCACCCGAAAGCCCGACCCGGAGGCCGTGGCCGGCGGCGTCGGGGCGACCTTCGCGGCCACCAAGGGCGGCGA
TCCCAGCGAGGAGGTCGAGGGCTATCTGAACCTGCCGCTGGCGGGCGGCCGGGCGGCGGTGCGGCTGGTCGCCTACCACG
ACGAGCGCGGCGGCTACCTCGACGACACCCCGCCCGGCGCGACGAACGTCGACCGCACCGTCCGCGACGGGGGTCGGCTG
GCCGTCCGGCTGCGGCTGGGAGACACGTGGAGGGTGGACGCCCTGGCCGCGACCCAGCACCTGCGCTCCGACAACGCCCA
GTACGTCAACGTCGTGCTCTCGACCGGCGCCAGCCGCGGCAATCGCATCCGGGAAGGACACGACAACGACTTCACCCACG
GCGCCGTGACCATCCAGGGCGACCTCGGCGGGGTGAGCCTCGTCTCGTCCTCGGCCTATGTGCACCACACGTTCACCAGC
CAGTACGACGCCTCGAGCGTGGACGATCCGCTGCTGCCCGGCGGCGCGTTCAACGCCGCCCCGGCGGACACGGTGGTCTA
TCTGGAGAACACCCGGGTCAACATGCTGGTCGAGGACCTGGTGCTCCGCTCGCGGACGGGCGGGCGGTTCCGCTGGCTGG
CCGGCGTCTACGGCTCGCTCACCCTGGAGCGCTCGCCCTCCTCGGCCGACATCTTCGCCCCCGGCGCCCCGCGGGTGCCG
GCCTACCGCGAGCACCGCAAGGACCGGGTCAGCGAGCTCGCGCTCTATGGCGAGGTGGACTATGCCCTCGCGCCGGGCTG
GACCCTCAGCGTCGGGGGCCGGCTGTTCGGAAGCTGGGTCCGGACCTCGGCCGACGTATGGACCTGGGCCCCCAACGGGC
CGCGGGTCGTCGCCTACGAGCGCCGGTTCCAGGGGGTCTCCCCGAAGATCTCGCTCCAGCGCGAGATCGGCGAGCGGGGG
GCGGCCTATGCGCTGATCTCGGAAGGCCACCGGCCCGGCGGCTTCAACACCGCCGGCATCACGCCCCTGCGCGAGATCCG
CACCACCTTCGGCGCCGATCGCCTGCGGAACTACGAGGCGGGGCTCAAGCTGCGCTTCTTCGACGGCCGGATGGCCGTCC
GCTCCGCCGCCTATTTCGCCGAGTGGCGCGACATCCAGACCGACCAGTACCGCATCACGGGCCTCGCCTACACCGCCAAC
GTCGCCGACGCCGAGACCTTCGGCCTGGAGGGCGAGATCGGCTACGACTGGGACTTCGGGCTGTCGGTGCAGGCCAACGC
CCTCCTCGCCGACTCCCGGGTGACGGACAAGAATCCGAACTTCACCGGGCGCGTGGCCGACGAGCTGCCCGCGGTCCCCG
ACGTCTCGGGCGGGGTCATCGCCATCTACCAGCGCCCGTTCCGCGACGACCTCGTGCTGCGGCTGGTGGGCGAGGCCAGC
TACGTCGGCCGCTCGGCCCTCTCTTTCGACGCCACGATCAACCGCCCCATGGCCGGCTACGTCCGCGCCCGGCTGTCCGC
CGAGCTGGCCGCCGACGGCTGGAGCGCGGCCGCCTTCGTCAGCAATCCGCTCGACGACGACAGTGACACCTTCGCCTACG
GTAATCCCTTCAGCTTCCGCGGCCTGCGGCAGGTCACGCCCCAGCGGCCGCGCACCATCGGCGTCCGGCTGGCCGCCAAC
TTTTAG

Upstream 100 bases:

>100_bases
GGTTCCCATCGAAGCGGTACGTTCCGACGCGGGTCTGGTCCTGCGGCGCGACGGCGCGCCGGGGCGTTGATGGGGTCTGG
AAGTCATCCCGACGCGGAGC

Downstream 100 bases:

>100_bases
ACAAAATTCACCGCCGCGGGCGGGGGGCGGCGCCGCGCGGCGCCGTCTTACTGATCAGGGGAACTCGCGCTCGTGGAAGC
GGGGGGGCAAGTGGTCAGGC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Domain Protein; NB Dependent Receptor; Nb-Dependent Receptor; NB-Dependent Receptor Plug Domain Protein; Outer Membrane Protein; NB-Dependent Receptor Protein; Outer Membrane nB-Dependent Receptor; NB-Dependent Siderophore Receptor; Receptor -Mostly Fe Transport; NB-Dependent Siderophore Receptor Protein

Number of amino acids: Translated: 801; Mature: 800

Protein sequence:

>801_residues
MPLRALLAGGLVACVATAAEAAGARHRLSISPKSYADALIDLGIQANVSIVGTSACGRGGPVALQGRYTVEEALARLLDG
APCQFRIVDARTVRITPAPTPAAPPVERPPADQPMLVSELVVTAAKRPASLDLLPAGVSAVSRAQIAATGAGDVGQTIGQ
VAGVLTTNLGPGRDKLLIRALSDGTFTGRARSTVSTYLDHAPLNYNAPDPDLRLVDIERIEVVRGPQGALYGSGSLSGVY
RIITRKPDPEAVAGGVGATFAATKGGDPSEEVEGYLNLPLAGGRAAVRLVAYHDERGGYLDDTPPGATNVDRTVRDGGRL
AVRLRLGDTWRVDALAATQHLRSDNAQYVNVVLSTGASRGNRIREGHDNDFTHGAVTIQGDLGGVSLVSSSAYVHHTFTS
QYDASSVDDPLLPGGAFNAAPADTVVYLENTRVNMLVEDLVLRSRTGGRFRWLAGVYGSLTLERSPSSADIFAPGAPRVP
AYREHRKDRVSELALYGEVDYALAPGWTLSVGGRLFGSWVRTSADVWTWAPNGPRVVAYERRFQGVSPKISLQREIGERG
AAYALISEGHRPGGFNTAGITPLREIRTTFGADRLRNYEAGLKLRFFDGRMAVRSAAYFAEWRDIQTDQYRITGLAYTAN
VADAETFGLEGEIGYDWDFGLSVQANALLADSRVTDKNPNFTGRVADELPAVPDVSGGVIAIYQRPFRDDLVLRLVGEAS
YVGRSALSFDATINRPMAGYVRARLSAELAADGWSAAAFVSNPLDDDSDTFAYGNPFSFRGLRQVTPQRPRTIGVRLAAN
F

Sequences:

>Translated_801_residues
MPLRALLAGGLVACVATAAEAAGARHRLSISPKSYADALIDLGIQANVSIVGTSACGRGGPVALQGRYTVEEALARLLDG
APCQFRIVDARTVRITPAPTPAAPPVERPPADQPMLVSELVVTAAKRPASLDLLPAGVSAVSRAQIAATGAGDVGQTIGQ
VAGVLTTNLGPGRDKLLIRALSDGTFTGRARSTVSTYLDHAPLNYNAPDPDLRLVDIERIEVVRGPQGALYGSGSLSGVY
RIITRKPDPEAVAGGVGATFAATKGGDPSEEVEGYLNLPLAGGRAAVRLVAYHDERGGYLDDTPPGATNVDRTVRDGGRL
AVRLRLGDTWRVDALAATQHLRSDNAQYVNVVLSTGASRGNRIREGHDNDFTHGAVTIQGDLGGVSLVSSSAYVHHTFTS
QYDASSVDDPLLPGGAFNAAPADTVVYLENTRVNMLVEDLVLRSRTGGRFRWLAGVYGSLTLERSPSSADIFAPGAPRVP
AYREHRKDRVSELALYGEVDYALAPGWTLSVGGRLFGSWVRTSADVWTWAPNGPRVVAYERRFQGVSPKISLQREIGERG
AAYALISEGHRPGGFNTAGITPLREIRTTFGADRLRNYEAGLKLRFFDGRMAVRSAAYFAEWRDIQTDQYRITGLAYTAN
VADAETFGLEGEIGYDWDFGLSVQANALLADSRVTDKNPNFTGRVADELPAVPDVSGGVIAIYQRPFRDDLVLRLVGEAS
YVGRSALSFDATINRPMAGYVRARLSAELAADGWSAAAFVSNPLDDDSDTFAYGNPFSFRGLRQVTPQRPRTIGVRLAAN
F
>Mature_800_residues
PLRALLAGGLVACVATAAEAAGARHRLSISPKSYADALIDLGIQANVSIVGTSACGRGGPVALQGRYTVEEALARLLDGA
PCQFRIVDARTVRITPAPTPAAPPVERPPADQPMLVSELVVTAAKRPASLDLLPAGVSAVSRAQIAATGAGDVGQTIGQV
AGVLTTNLGPGRDKLLIRALSDGTFTGRARSTVSTYLDHAPLNYNAPDPDLRLVDIERIEVVRGPQGALYGSGSLSGVYR
IITRKPDPEAVAGGVGATFAATKGGDPSEEVEGYLNLPLAGGRAAVRLVAYHDERGGYLDDTPPGATNVDRTVRDGGRLA
VRLRLGDTWRVDALAATQHLRSDNAQYVNVVLSTGASRGNRIREGHDNDFTHGAVTIQGDLGGVSLVSSSAYVHHTFTSQ
YDASSVDDPLLPGGAFNAAPADTVVYLENTRVNMLVEDLVLRSRTGGRFRWLAGVYGSLTLERSPSSADIFAPGAPRVPA
YREHRKDRVSELALYGEVDYALAPGWTLSVGGRLFGSWVRTSADVWTWAPNGPRVVAYERRFQGVSPKISLQREIGERGA
AYALISEGHRPGGFNTAGITPLREIRTTFGADRLRNYEAGLKLRFFDGRMAVRSAAYFAEWRDIQTDQYRITGLAYTANV
ADAETFGLEGEIGYDWDFGLSVQANALLADSRVTDKNPNFTGRVADELPAVPDVSGGVIAIYQRPFRDDLVLRLVGEASY
VGRSALSFDATINRPMAGYVRARLSAELAADGWSAAAFVSNPLDDDSDTFAYGNPFSFRGLRQVTPQRPRTIGVRLAANF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788478, Length=132, Percent_Identity=34.0909090909091, Blast_Score=66, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85419; Mature: 85288

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLRALLAGGLVACVATAAEAAGARHRLSISPKSYADALIDLGIQANVSIVGTSACGRGG
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCCC
PVALQGRYTVEEALARLLDGAPCQFRIVDARTVRITPAPTPAAPPVERPPADQPMLVSEL
CEEEECCCCHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHH
VVTAAKRPASLDLLPAGVSAVSRAQIAATGAGDVGQTIGQVAGVLTTNLGPGRDKLLIRA
HHHHCCCCCCCEEECCCHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEE
LSDGTFTGRARSTVSTYLDHAPLNYNAPDPDLRLVDIERIEVVRGPQGALYGSGSLSGVY
ECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEECCCCCCEEE
RIITRKPDPEAVAGGVGATFAATKGGDPSEEVEGYLNLPLAGGRAAVRLVAYHDERGGYL
EEEECCCCCHHHHCCCCCEEEECCCCCCHHHCCCEEECCEECCCEEEEEEEEECCCCCCC
DDTPPGATNVDRTVRDGGRLAVRLRLGDTWRVDALAATQHLRSDNAQYVNVVLSTGASRG
CCCCCCCCCCCHHHCCCCEEEEEEEECCCEEEHHHHHHHHHHCCCCEEEEEEEECCCCCC
NRIREGHDNDFTHGAVTIQGDLGGVSLVSSSAYVHHTFTSQYDASSVDDPLLPGGAFNAA
CCCCCCCCCCCCCEEEEEEECCCCEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCC
PADTVVYLENTRVNMLVEDLVLRSRTGGRFRWLAGVYGSLTLERSPSSADIFAPGAPRVP
CCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCCCEEECCCCCCCC
AYREHRKDRVSELALYGEVDYALAPGWTLSVGGRLFGSWVRTSADVWTWAPNGPRVVAYE
CHHHHHHHHHHHEEEECCCCEEECCCCEEEECHHHHHHHHHCCCCEEEECCCCCEEEEEE
RRFQGVSPKISLQREIGERGAAYALISEGHRPGGFNTAGITPLREIRTTFGADRLRNYEA
HHCCCCCCCEEHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCHHHHHCCCC
GLKLRFFDGRMAVRSAAYFAEWRDIQTDQYRITGLAYTANVADAETFGLEGEIGYDWDFG
CEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCHHCCCCCCCCCCCCCC
LSVQANALLADSRVTDKNPNFTGRVADELPAVPDVSGGVIAIYQRPFRDDLVLRLVGEAS
CEEEECEEEECCCCCCCCCCCCCEEHHHCCCCCCCCCCEEEEECCCCCCCEEEEEECCHH
YVGRSALSFDATINRPMAGYVRARLSAELAADGWSAAAFVSNPLDDDSDTFAYGNPFSFR
HCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEECCCCCCCC
GLRQVTPQRPRTIGVRLAANF
CHHHCCCCCCCEEEEEEEECC
>Mature Secondary Structure 
PLRALLAGGLVACVATAAEAAGARHRLSISPKSYADALIDLGIQANVSIVGTSACGRGG
CHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCCC
PVALQGRYTVEEALARLLDGAPCQFRIVDARTVRITPAPTPAAPPVERPPADQPMLVSEL
CEEEECCCCHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHH
VVTAAKRPASLDLLPAGVSAVSRAQIAATGAGDVGQTIGQVAGVLTTNLGPGRDKLLIRA
HHHHCCCCCCCEEECCCHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEE
LSDGTFTGRARSTVSTYLDHAPLNYNAPDPDLRLVDIERIEVVRGPQGALYGSGSLSGVY
ECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEECCCCCCEEE
RIITRKPDPEAVAGGVGATFAATKGGDPSEEVEGYLNLPLAGGRAAVRLVAYHDERGGYL
EEEECCCCCHHHHCCCCCEEEECCCCCCHHHCCCEEECCEECCCEEEEEEEEECCCCCCC
DDTPPGATNVDRTVRDGGRLAVRLRLGDTWRVDALAATQHLRSDNAQYVNVVLSTGASRG
CCCCCCCCCCCHHHCCCCEEEEEEEECCCEEEHHHHHHHHHHCCCCEEEEEEEECCCCCC
NRIREGHDNDFTHGAVTIQGDLGGVSLVSSSAYVHHTFTSQYDASSVDDPLLPGGAFNAA
CCCCCCCCCCCCCEEEEEEECCCCEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCC
PADTVVYLENTRVNMLVEDLVLRSRTGGRFRWLAGVYGSLTLERSPSSADIFAPGAPRVP
CCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCCCEEECCCCCCCC
AYREHRKDRVSELALYGEVDYALAPGWTLSVGGRLFGSWVRTSADVWTWAPNGPRVVAYE
CHHHHHHHHHHHEEEECCCCEEECCCCEEEECHHHHHHHHHCCCCEEEECCCCCEEEEEE
RRFQGVSPKISLQREIGERGAAYALISEGHRPGGFNTAGITPLREIRTTFGADRLRNYEA
HHCCCCCCCEEHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCHHHHHCCCC
GLKLRFFDGRMAVRSAAYFAEWRDIQTDQYRITGLAYTANVADAETFGLEGEIGYDWDFG
CEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCHHCCCCCCCCCCCCCC
LSVQANALLADSRVTDKNPNFTGRVADELPAVPDVSGGVIAIYQRPFRDDLVLRLVGEAS
CEEEECEEEECCCCCCCCCCCCCEEHHHCCCCCCCCCCEEEEECCCCCCCEEEEEECCHH
YVGRSALSFDATINRPMAGYVRARLSAELAADGWSAAAFVSNPLDDDSDTFAYGNPFSFR
HCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEECCCCCCCC
GLRQVTPQRPRTIGVRLAANF
CHHHCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA