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The map label for this gene is ydjA [H]

Identifier: 197105689

GI number: 197105689

Start: 2519061

End: 2519672

Strand: Direct

Name: ydjA [H]

Synonym: PHZ_c2227

Alternate gene names: 197105689

Gene position: 2519061-2519672 (Clockwise)

Preceding gene: 197105685

Following gene: 197105691

Centisome position: 63.04

GC content: 73.53

Gene sequence:

>612_bases
TTGAGCTCTGACCTGCCGCCCGTCCCGGAGTTCGGCGCCCCGCTTCCCATCGCCCCCGTCCCGGAAGTCCTGCGCTTCCT
GGCGCTCCGCCGCTCGGCCCCCGCCCTGACGCTGGCCGAGCCCGGCCCCTCCTCGGACCAGCTGGGCGACCTCCTTCGCC
TGGCCGGCCGGGCGCCCGACCACGGCAAGCTGTCGCCCTGGCGCTTCGTCCTGCTGGAAGGCGAGGCCAAGACCGCCTTC
GCCGACCGGCTCGAGGCCCTCGCGCGCGGCCGGGGCGATGCGACCCAGGCGGCCAAGCTGGGCAAGCTGCGGACGCCGCC
CCTGGCGATCGTGGTCGTCTCGCGGGTGAAGCCCGGGGCGATTCCGGAATGGGAGCAGGTGCTGTCGGCGGGCGCGGTCT
GCACCAACCTGCTGAACGCCGCCCAGGCCATGGGCTACGGCGCGAACTGGATCACGGATTGGTACAGCTTCGATTCCGAG
GCGCAGCGGGTCCTCGGCCTGGCCGAGCACGAACGCGTCGCGGGGTTCATCATGATCGGGACGCCCCGGGAGCCGCCGCT
GGAGCGCGAGCGGATGGACGTGGGCAGCCTCGTCACCCGCTGGAAGCCCTGA

Upstream 100 bases:

>100_bases
CGGGCGTGTCGGGCATCTCTGTCACCTCGCCTTGCGGAACGCACGGGCGAGCCGATAAATCCACGGCTCTATCGTTTTCC
TAAACGCCAAGGCCTCCTCA

Downstream 100 bases:

>100_bases
GCCCCACGGGCCAGACACACAGCGGCCGGACGGCGCGCCGCGCCGCCCGGCCTGAGGTGACACGCCCGAGGAGAGTTGGG
CAAGATCACCTATAGGCCTC

Product: nitroreductase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MSSDLPPVPEFGAPLPIAPVPEVLRFLALRRSAPALTLAEPGPSSDQLGDLLRLAGRAPDHGKLSPWRFVLLEGEAKTAF
ADRLEALARGRGDATQAAKLGKLRTPPLAIVVVSRVKPGAIPEWEQVLSAGAVCTNLLNAAQAMGYGANWITDWYSFDSE
AQRVLGLAEHERVAGFIMIGTPREPPLERERMDVGSLVTRWKP

Sequences:

>Translated_203_residues
MSSDLPPVPEFGAPLPIAPVPEVLRFLALRRSAPALTLAEPGPSSDQLGDLLRLAGRAPDHGKLSPWRFVLLEGEAKTAF
ADRLEALARGRGDATQAAKLGKLRTPPLAIVVVSRVKPGAIPEWEQVLSAGAVCTNLLNAAQAMGYGANWITDWYSFDSE
AQRVLGLAEHERVAGFIMIGTPREPPLERERMDVGSLVTRWKP
>Mature_202_residues
SSDLPPVPEFGAPLPIAPVPEVLRFLALRRSAPALTLAEPGPSSDQLGDLLRLAGRAPDHGKLSPWRFVLLEGEAKTAFA
DRLEALARGRGDATQAAKLGKLRTPPLAIVVVSRVKPGAIPEWEQVLSAGAVCTNLLNAAQAMGYGANWITDWYSFDSEA
QRVLGLAEHERVAGFIMIGTPREPPLERERMDVGSLVTRWKP

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=165, Percent_Identity=35.7575757575758, Blast_Score=101, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 21919; Mature: 21787

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDLPPVPEFGAPLPIAPVPEVLRFLALRRSAPALTLAEPGPSSDQLGDLLRLAGRAPD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCC
HGKLSPWRFVLLEGEAKTAFADRLEALARGRGDATQAAKLGKLRTPPLAIVVVSRVKPGA
CCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCC
IPEWEQVLSAGAVCTNLLNAAQAMGYGANWITDWYSFDSEAQRVLGLAEHERVAGFIMIG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCEEEEEEEC
TPREPPLERERMDVGSLVTRWKP
CCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSDLPPVPEFGAPLPIAPVPEVLRFLALRRSAPALTLAEPGPSSDQLGDLLRLAGRAPD
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCC
HGKLSPWRFVLLEGEAKTAFADRLEALARGRGDATQAAKLGKLRTPPLAIVVVSRVKPGA
CCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCC
IPEWEQVLSAGAVCTNLLNAAQAMGYGANWITDWYSFDSEAQRVLGLAEHERVAGFIMIG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCEEEEEEEC
TPREPPLERERMDVGSLVTRWKP
CCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]