| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105688
Identifier: 197105688
GI number: 197105688
Start: 2518362
End: 2518976
Strand: Reverse
Name: 197105688
Synonym: PHZ_c2226
Alternate gene names: NA
Gene position: 2518976-2518362 (Counterclockwise)
Preceding gene: 197105690
Following gene: 197105687
Centisome position: 63.03
GC content: 72.52
Gene sequence:
>615_bases ATGCCCGACACGCCCGCCTGGCTGGCGCCCCATGGAAAACCCTGGATCCGCGGCGAGAGCCGGGTGGTGTACGACAACCC CTGGATCCGGGTCACCGAGCACGACGCCATCGCGCCCACGGGCCGTCCGGCGCTGTACGGGGTGGTCGGCTTCAAGAACG TGGCGGTGGCGGTCCTGCCCCTGCACGACGACGGCTCGGTGACGCTGGTCGGCCAGCACCGCCTGCCGCACGCCGACTAC AGCTGGGAGATCCCCGAGGGCGGCGCGCCGCGCGACGAGGACCCGCTGGAGGCGGCCAGGCGCGAGCTGGCCGAGGAGGC CGGGCTCGCAGCCGACGACTGGCGCGAGGTGATGCGGACCCAGCTCTCGAACTCGATCACCGACGAGCGGGCCGTCGGCT ATGTGGCGCTGGGCCTTCGGGCGGCGGACGGCGCCCATGAGCTGGACGGTACGGAGTCCCTGGCCATCGTCCGCGCGCCG TTCCGCGAGGTGCTGGACGCGGCGCTGGCCGGACACATGCCCGACATGTTGACGGTGGCGATGCTGCTGCGCGCATACCA TATGGCTCGGGAAGGGTCGTTGCCGCCCACGCTCGCGCGGGCGATGCTAGGGTAG
Upstream 100 bases:
>100_bases GCAGGTCAGAGCTCAATGAGGAGGCCTTGGCGTTTAGGAAAACGATAGAGCCGTGGATTTATCGGCTCGCCCGTGCGTTC CGCAAGGCGAGGTGACAGAG
Downstream 100 bases:
>100_bases GGAGAGCCCGATGGGTCGGGAGGAACCGATGAGCCAACGCCTGGAAGTGGTGGACCCCGCCACGCCGCCCCCCGTGTGGG CCGCGCTGCGCAACGAAGCC
Product: MutT/nudix family protein
Products: NA
Alternate protein names: MutT/Nudix Family Protein; Nudix Hydrolase; Nudix Hydroxylase; Hydrolase MutT; MutT/Nudix Family Phosphohydrolase; Pyrophosphohydrolase Related Protein; NTP Pyrophosphohydrolase Including Oxidative Damage Repair; Hydrolase NUDIX Family; Hydrolase NUDIX Family Protein
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MPDTPAWLAPHGKPWIRGESRVVYDNPWIRVTEHDAIAPTGRPALYGVVGFKNVAVAVLPLHDDGSVTLVGQHRLPHADY SWEIPEGGAPRDEDPLEAARRELAEEAGLAADDWREVMRTQLSNSITDERAVGYVALGLRAADGAHELDGTESLAIVRAP FREVLDAALAGHMPDMLTVAMLLRAYHMAREGSLPPTLARAMLG
Sequences:
>Translated_204_residues MPDTPAWLAPHGKPWIRGESRVVYDNPWIRVTEHDAIAPTGRPALYGVVGFKNVAVAVLPLHDDGSVTLVGQHRLPHADY SWEIPEGGAPRDEDPLEAARRELAEEAGLAADDWREVMRTQLSNSITDERAVGYVALGLRAADGAHELDGTESLAIVRAP FREVLDAALAGHMPDMLTVAMLLRAYHMAREGSLPPTLARAMLG >Mature_203_residues PDTPAWLAPHGKPWIRGESRVVYDNPWIRVTEHDAIAPTGRPALYGVVGFKNVAVAVLPLHDDGSVTLVGQHRLPHADYS WEIPEGGAPRDEDPLEAARRELAEEAGLAADDWREVMRTQLSNSITDERAVGYVALGLRAADGAHELDGTESLAIVRAPF REVLDAALAGHMPDMLTVAMLLRAYHMAREGSLPPTLARAMLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22178; Mature: 22047
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDTPAWLAPHGKPWIRGESRVVYDNPWIRVTEHDAIAPTGRPALYGVVGFKNVAVAVLP CCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEE LHDDGSVTLVGQHRLPHADYSWEIPEGGAPRDEDPLEAARRELAEEAGLAADDWREVMRT ECCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH QLSNSITDERAVGYVALGLRAADGAHELDGTESLAIVRAPFREVLDAALAGHMPDMLTVA HHHHCCCHHHHHEEEEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHH MLLRAYHMAREGSLPPTLARAMLG HHHHHHHHHHCCCCCHHHHHHHCC >Mature Secondary Structure PDTPAWLAPHGKPWIRGESRVVYDNPWIRVTEHDAIAPTGRPALYGVVGFKNVAVAVLP CCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEE LHDDGSVTLVGQHRLPHADYSWEIPEGGAPRDEDPLEAARRELAEEAGLAADDWREVMRT ECCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH QLSNSITDERAVGYVALGLRAADGAHELDGTESLAIVRAPFREVLDAALAGHMPDMLTVA HHHHCCCHHHHHEEEEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHH MLLRAYHMAREGSLPPTLARAMLG HHHHHHHHHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA