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The map label for this gene is ytfH [C]

Identifier: 197105678

GI number: 197105678

Start: 2504611

End: 2505063

Strand: Reverse

Name: ytfH [C]

Synonym: PHZ_c2215

Alternate gene names: 197105678

Gene position: 2505063-2504611 (Counterclockwise)

Preceding gene: 197105682

Following gene: 197105677

Centisome position: 62.69

GC content: 72.63

Gene sequence:

>453_bases
ATGAAGTGGAGCGAACTGTCGGAGGCGCCGTGCTCGGTGGCCCGCTCGGTGGCGGTGATCGGCGACCGCTGGACCCTGAT
GCTGCTGCGCGACTGCTTCCTGGGGGTGCGGCGCTTCGAGGATTTCGAGCGGCGCCTGGGGATCTCGCGCAGCATCGTGG
CCGGCCGGCTGAAGCGGCTGACCGACGAGGGCGTGCTGCGGCGCGAGGCCTACCAGGACCGGCCGCTGCGGCACGAGTAC
CGGCTGACCGAGAAGGGCCTGGCGCTGCATCCGGTGCTGATGGCGATCGTCCACTGGGGCGACGCCTACTACGCCGGCGA
GGCGGGGCCGCCCCTGCTGCACCGGCACAGGACCTGCGGTTGCGACTTCCAGCCGGTGACCACCTGCTCGGAATGCGGCG
GCCCGGTTACGGCGCGGGACGTGGAGGTGCGGCCCGGGCCGGGCGTGGGATAG

Upstream 100 bases:

>100_bases
GGCGGACATGGCGCGGCTCCGTTCGGAATCTGGACGGACGTTCGTATTGAATCCGAACGGAGTCAATGGGACCATGGCGC
GAACCGCAGGAGCGCGTCGG

Downstream 100 bases:

>100_bases
GCGAGCGGGCCCGCCAGCGTTGGCGGATGCGGTTCCGGCGCGCGGTGCGCGCCGGCCTCTCACCGCCCTCCCTCTCGGCA
CCGCGCGCCGGGGGAGAGGG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MKWSELSEAPCSVARSVAVIGDRWTLMLLRDCFLGVRRFEDFERRLGISRSIVAGRLKRLTDEGVLRREAYQDRPLRHEY
RLTEKGLALHPVLMAIVHWGDAYYAGEAGPPLLHRHRTCGCDFQPVTTCSECGGPVTARDVEVRPGPGVG

Sequences:

>Translated_150_residues
MKWSELSEAPCSVARSVAVIGDRWTLMLLRDCFLGVRRFEDFERRLGISRSIVAGRLKRLTDEGVLRREAYQDRPLRHEY
RLTEKGLALHPVLMAIVHWGDAYYAGEAGPPLLHRHRTCGCDFQPVTTCSECGGPVTARDVEVRPGPGVG
>Mature_150_residues
MKWSELSEAPCSVARSVAVIGDRWTLMLLRDCFLGVRRFEDFERRLGISRSIVAGRLKRLTDEGVLRREAYQDRPLRHEY
RLTEKGLALHPVLMAIVHWGDAYYAGEAGPPLLHRHRTCGCDFQPVTTCSECGGPVTARDVEVRPGPGVG

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 16847; Mature: 16847

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWSELSEAPCSVARSVAVIGDRWTLMLLRDCFLGVRRFEDFERRLGISRSIVAGRLKRL
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
TDEGVLRREAYQDRPLRHEYRLTEKGLALHPVLMAIVHWGDAYYAGEAGPPLLHRHRTCG
HHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCEECCCCCCHHHHHCCCCC
CDFQPVTTCSECGGPVTARDVEVRPGPGVG
CCCCCCCCHHHCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MKWSELSEAPCSVARSVAVIGDRWTLMLLRDCFLGVRRFEDFERRLGISRSIVAGRLKRL
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
TDEGVLRREAYQDRPLRHEYRLTEKGLALHPVLMAIVHWGDAYYAGEAGPPLLHRHRTCG
HHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCEECCCCCCHHHHHCCCCC
CDFQPVTTCSECGGPVTARDVEVRPGPGVG
CCCCCCCCHHHCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]