| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105665
Identifier: 197105665
GI number: 197105665
Start: 2487346
End: 2488473
Strand: Direct
Name: 197105665
Synonym: PHZ_c2202
Alternate gene names: NA
Gene position: 2487346-2488473 (Clockwise)
Preceding gene: 197105652
Following gene: 197105666
Centisome position: 62.24
GC content: 69.24
Gene sequence:
>1128_bases ATGAGTCTTTCCCGTCTCACATCGGCGGCGATCTTCATCGCCCTCCTGGCTGGCCGGGCGCACGCACTGGAGCAGCCGGC GAACGACGCGGGTCCTGCGGGGTACCGTCAGGAGCTGACGGCCGTCGCCGACGGCGTCTGGGTGCTGGCCCAGCCACGCT TCCTCGTGCAGCCGGCCGGCAATGTGACGATCGTGGAGCAGGCCGACGGCGTGGTCTTAGTGGACGCCGGCGGATCGCCC GGCGCGGCCCGCCGGCTCGTGGCGGAAATCCGCCGCCTTACGCCAAAGCCGGTCAAGGCGGTGATCATCACCCATTGGCA TGGCGACCACCCACAGGGCCTGGAGGTCATCCTCTCCGCCTGGCCGCAGGCGCGGACGATCTCGACGGCCGCGACTCGCG CCCACCTTTCCGATCCCAAGACGATGAACACGCCTGGCGCGCCCGACGCCAAGGCCGACGCCGACCTTCGTGAGCGAACC GACGGCTTCGCCGCCTACTGCCTGGACATGGCCGCCAAGGCCAAGACGCTTGAGGAGAAGGCCGGCTGGGAGGAGAGCGC CGCGCTTTTCGGGGCCTATGCCGATGATATGGCCGGCGCTGTCACGATCGCTCCGGCGGAAGGCTTCATTGACCGGCTCG TCATCCCGGATTCCGAGCGACCAGTGGAAGTGCGCTTCCTGGGCCGTGCGAACACTGACGGCGACGCCGTGGCCTGGCTT CCACGCCAGGGGGTCCTCGTCGCCGGCGACGTAGTGGTGGCCCCGATACCGTTCGGCTTCGGCAGCTACCCGGGAGATTG GCTTCAAGTCCTGCGCCAAGTCCGCGACCTGTCCTTCCGGGTGCTCGTCCCCGGACACGGGCCGCCGCAGCGGGACAGAG CCTACATCGACCGTCTCGCGGCGGCGATCGAGGACATCCGCGCGCAGGTCGCGCCTCTCGCTGCCGAGGGACTCAGCCTG GAAGATGCGCGGCGGCGGCTGGACCTCTCGGCCCAGACGCACAGCTTCGCCGGGGACGATCCGTGGCTGCGCCGCTGGTT CGAAGCCTACTGGATCACACCCATCGTCGCCTCGGCCTATAGGGAGGCCAGAGGCGAGCCGATCGCACAGAGCCTCAAGG GCGAGTAG
Upstream 100 bases:
>100_bases GCACCACGTCTCCCCGGCCCTTGAGGGTCGGGGAGACGCCAACTCCCCCGTTAAATCGATTTCACTCGCCTCATCCGCAC ACCCATGGCTCGGTGTGGCG
Downstream 100 bases:
>100_bases TCCGCGCGACCGTTGTGAACGGGCGCGAAGACCAGCTCTGACCCGATCAAGGCGACAAGAGCACATACACCTGCGATGGA TGCACCCAACGGAGCGCCGC
Product: beta-lactamase
Products: NA
Alternate protein names: Beta-Lactamase; Beta-Lactamase Domain-Containing Protein
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MSLSRLTSAAIFIALLAGRAHALEQPANDAGPAGYRQELTAVADGVWVLAQPRFLVQPAGNVTIVEQADGVVLVDAGGSP GAARRLVAEIRRLTPKPVKAVIITHWHGDHPQGLEVILSAWPQARTISTAATRAHLSDPKTMNTPGAPDAKADADLRERT DGFAAYCLDMAAKAKTLEEKAGWEESAALFGAYADDMAGAVTIAPAEGFIDRLVIPDSERPVEVRFLGRANTDGDAVAWL PRQGVLVAGDVVVAPIPFGFGSYPGDWLQVLRQVRDLSFRVLVPGHGPPQRDRAYIDRLAAAIEDIRAQVAPLAAEGLSL EDARRRLDLSAQTHSFAGDDPWLRRWFEAYWITPIVASAYREARGEPIAQSLKGE
Sequences:
>Translated_375_residues MSLSRLTSAAIFIALLAGRAHALEQPANDAGPAGYRQELTAVADGVWVLAQPRFLVQPAGNVTIVEQADGVVLVDAGGSP GAARRLVAEIRRLTPKPVKAVIITHWHGDHPQGLEVILSAWPQARTISTAATRAHLSDPKTMNTPGAPDAKADADLRERT DGFAAYCLDMAAKAKTLEEKAGWEESAALFGAYADDMAGAVTIAPAEGFIDRLVIPDSERPVEVRFLGRANTDGDAVAWL PRQGVLVAGDVVVAPIPFGFGSYPGDWLQVLRQVRDLSFRVLVPGHGPPQRDRAYIDRLAAAIEDIRAQVAPLAAEGLSL EDARRRLDLSAQTHSFAGDDPWLRRWFEAYWITPIVASAYREARGEPIAQSLKGE >Mature_374_residues SLSRLTSAAIFIALLAGRAHALEQPANDAGPAGYRQELTAVADGVWVLAQPRFLVQPAGNVTIVEQADGVVLVDAGGSPG AARRLVAEIRRLTPKPVKAVIITHWHGDHPQGLEVILSAWPQARTISTAATRAHLSDPKTMNTPGAPDAKADADLRERTD GFAAYCLDMAAKAKTLEEKAGWEESAALFGAYADDMAGAVTIAPAEGFIDRLVIPDSERPVEVRFLGRANTDGDAVAWLP RQGVLVAGDVVVAPIPFGFGSYPGDWLQVLRQVRDLSFRVLVPGHGPPQRDRAYIDRLAAAIEDIRAQVAPLAAEGLSLE DARRRLDLSAQTHSFAGDDPWLRRWFEAYWITPIVASAYREARGEPIAQSLKGE
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40335; Mature: 40204
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSRLTSAAIFIALLAGRAHALEQPANDAGPAGYRQELTAVADGVWVLAQPRFLVQPAG CCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHCCEEEEECCCEEEECCC NVTIVEQADGVVLVDAGGSPGAARRLVAEIRRLTPKPVKAVIITHWHGDHPQGLEVILSA CEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHC WPQARTISTAATRAHLSDPKTMNTPGAPDAKADADLRERTDGFAAYCLDMAAKAKTLEEK CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH AGWEESAALFGAYADDMAGAVTIAPAEGFIDRLVIPDSERPVEVRFLGRANTDGDAVAWL CCCCHHHHHHHHHHHHCCCEEEEECCHHHHHEEECCCCCCCEEEEEEECCCCCCCEEEEE PRQGVLVAGDVVVAPIPFGFGSYPGDWLQVLRQVRDLSFRVLVPGHGPPQRDRAYIDRLA CCCCEEEECCEEEEECCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHH AAIEDIRAQVAPLAAEGLSLEDARRRLDLSAQTHSFAGDDPWLRRWFEAYWITPIVASAY HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH REARGEPIAQSLKGE HHHCCCHHHHHCCCC >Mature Secondary Structure SLSRLTSAAIFIALLAGRAHALEQPANDAGPAGYRQELTAVADGVWVLAQPRFLVQPAG CHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHCCEEEEECCCEEEECCC NVTIVEQADGVVLVDAGGSPGAARRLVAEIRRLTPKPVKAVIITHWHGDHPQGLEVILSA CEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHC WPQARTISTAATRAHLSDPKTMNTPGAPDAKADADLRERTDGFAAYCLDMAAKAKTLEEK CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH AGWEESAALFGAYADDMAGAVTIAPAEGFIDRLVIPDSERPVEVRFLGRANTDGDAVAWL CCCCHHHHHHHHHHHHCCCEEEEECCHHHHHEEECCCCCCCEEEEEEECCCCCCCEEEEE PRQGVLVAGDVVVAPIPFGFGSYPGDWLQVLRQVRDLSFRVLVPGHGPPQRDRAYIDRLA CCCCEEEECCEEEEECCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHH AAIEDIRAQVAPLAAEGLSLEDARRRLDLSAQTHSFAGDDPWLRRWFEAYWITPIVASAY HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH REARGEPIAQSLKGE HHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA