| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105605
Identifier: 197105605
GI number: 197105605
Start: 2412248
End: 2413138
Strand: Reverse
Name: 197105605
Synonym: PHZ_c2142
Alternate gene names: NA
Gene position: 2413138-2412248 (Counterclockwise)
Preceding gene: 197105611
Following gene: 197105604
Centisome position: 60.38
GC content: 71.6
Gene sequence:
>891_bases GTGTCCGATCAGCCCAAGGCGTCCATCCCACCGAAGAAGATCCTGCTCGCCACCGACCTGAGCGGCCGGGGCGACCGGGC GCTCGATCGGGCGACGCAACTTGCCGCCCAGTGGCACGCCGAGCTGACGGTGGTGCATGCGATCGAGGGCGCGGGCGACC TGCCCGACTATCGACGGCTCCCCTCCTGGCGACGACCGCCCGAGCCGGCGGCGCTGGTCGAGCGGCAGATCCGCGAGGAC GTGCGCGGACCTTGCCCCCGCCTGCGCGTGGTGGTGGAGGAGGGGCCCGCGCCCCAGGTGATCCTCAACGCGGTGGCGAA CGAAGGCGCGGACCTGGTGGTGCTGGGCCTGGGTCGCCACCGGCCGTTCGGACTGGCGGGGGTCGGCCGGACGATCGACG AGCTTTTCCGGCGATCCCCGGTCTCGGTGCTCGTGGTCAAGCGCCGGCCGAACGGCCCCTACGGCCACGTGCTCGCGGGG GTCGACTTCACGCCGGAGTCGCGGCGGGGCGTCGAGGTGGCGGCGGAGTTCTTTCCCGAGGCCGCCATGACCGTGATGCA TGCCTACGAGCTCCCTTACCGGGGCTACATGCTCGACACCAAGCTGGGCCATGACTTCGCCGAGCTCGAGACCGGGACCC TGCGCGGCTTCCTCGACGAGGCCCAGCTTCCGCAGGGGCGTCGCGAGCGCATCTTGCCGCTCGTCGAGCATGGGCCGCCC GAGGTGATGCTCGGCGCCTATGTGATGGAACAGGGCGCCGACCTGACGGTGATCGGCGCCTACGAGCGCAACCGCCTCTT CCACGTCGTGGTGGTCGGGAAGGGGCCGCGCATCGTCGAGAGCATCCCCAGCGACGTCCTGGTGGTGCGGGCCGAGCGGC CAGCCGACTGA
Upstream 100 bases:
>100_bases TGTTTTGAATATTGATTGGGGCGACCTAGATCATCGGGTGGAAAATCTCCACAATCCCGTGATCCCGCGCGGCGGTTGTG CATGTCACCAAGGTGAGGCC
Downstream 100 bases:
>100_bases CGCCGGCGCCGGCCGATGGACGCGGGCCCGGGTCTGGCGAACCGGGACGGGGTCTCGTACGGTGTCTGCGCTGCGGGTCC CGGCGCCGGTCGCGGCGCAT
Product: universal stress protein UspA
Products: NA
Alternate protein names: UspA Domain-Containing Protein; UspA Domain Protein; Universal Stress Protein UspA; Usp-Like Protein; Universal Stress Family
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSDQPKASIPPKKILLATDLSGRGDRALDRATQLAAQWHAELTVVHAIEGAGDLPDYRRLPSWRRPPEPAALVERQIRED VRGPCPRLRVVVEEGPAPQVILNAVANEGADLVVLGLGRHRPFGLAGVGRTIDELFRRSPVSVLVVKRRPNGPYGHVLAG VDFTPESRRGVEVAAEFFPEAAMTVMHAYELPYRGYMLDTKLGHDFAELETGTLRGFLDEAQLPQGRRERILPLVEHGPP EVMLGAYVMEQGADLTVIGAYERNRLFHVVVVGKGPRIVESIPSDVLVVRAERPAD
Sequences:
>Translated_296_residues MSDQPKASIPPKKILLATDLSGRGDRALDRATQLAAQWHAELTVVHAIEGAGDLPDYRRLPSWRRPPEPAALVERQIRED VRGPCPRLRVVVEEGPAPQVILNAVANEGADLVVLGLGRHRPFGLAGVGRTIDELFRRSPVSVLVVKRRPNGPYGHVLAG VDFTPESRRGVEVAAEFFPEAAMTVMHAYELPYRGYMLDTKLGHDFAELETGTLRGFLDEAQLPQGRRERILPLVEHGPP EVMLGAYVMEQGADLTVIGAYERNRLFHVVVVGKGPRIVESIPSDVLVVRAERPAD >Mature_295_residues SDQPKASIPPKKILLATDLSGRGDRALDRATQLAAQWHAELTVVHAIEGAGDLPDYRRLPSWRRPPEPAALVERQIREDV RGPCPRLRVVVEEGPAPQVILNAVANEGADLVVLGLGRHRPFGLAGVGRTIDELFRRSPVSVLVVKRRPNGPYGHVLAGV DFTPESRRGVEVAAEFFPEAAMTVMHAYELPYRGYMLDTKLGHDFAELETGTLRGFLDEAQLPQGRRERILPLVEHGPPE VMLGAYVMEQGADLTVIGAYERNRLFHVVVVGKGPRIVESIPSDVLVVRAERPAD
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32563; Mature: 32432
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQPKASIPPKKILLATDLSGRGDRALDRATQLAAQWHAELTVVHAIEGAGDLPDYRRL CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHC PSWRRPPEPAALVERQIREDVRGPCPRLRVVVEEGPAPQVILNAVANEGADLVVLGLGRH CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCC RPFGLAGVGRTIDELFRRSPVSVLVVKRRPNGPYGHVLAGVDFTPESRRGVEVAAEFFPE CCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCHHHHHHHCCH AAMTVMHAYELPYRGYMLDTKLGHDFAELETGTLRGFLDEAQLPQGRRERILPLVEHGPP HHHHHHHHHCCCCCCEEEECCCCCCHHHHCCHHHHHHHHHHCCCCCCHHHCCCHHCCCCC EVMLGAYVMEQGADLTVIGAYERNRLFHVVVVGKGPRIVESIPSDVLVVRAERPAD HHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCHHHHHCCCCEEEEEECCCCC >Mature Secondary Structure SDQPKASIPPKKILLATDLSGRGDRALDRATQLAAQWHAELTVVHAIEGAGDLPDYRRL CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHC PSWRRPPEPAALVERQIREDVRGPCPRLRVVVEEGPAPQVILNAVANEGADLVVLGLGRH CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCC RPFGLAGVGRTIDELFRRSPVSVLVVKRRPNGPYGHVLAGVDFTPESRRGVEVAAEFFPE CCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCHHHHHHHCCH AAMTVMHAYELPYRGYMLDTKLGHDFAELETGTLRGFLDEAQLPQGRRERILPLVEHGPP HHHHHHHHHCCCCCCEEEECCCCCCHHHHCCHHHHHHHHHHCCCCCCHHHCCCHHCCCCC EVMLGAYVMEQGADLTVIGAYERNRLFHVVVVGKGPRIVESIPSDVLVVRAERPAD HHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCHHHHHCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA