| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105555
Identifier: 197105555
GI number: 197105555
Start: 2345258
End: 2346178
Strand: Direct
Name: 197105555
Synonym: PHZ_c2092
Alternate gene names: NA
Gene position: 2345258-2346178 (Clockwise)
Preceding gene: 197105554
Following gene: 197105556
Centisome position: 58.69
GC content: 68.84
Gene sequence:
>921_bases GTGATCGAAGCCGCCAAGATCTGGAACGAGCCGAACAACAAGTCGCACTGGGACCCGAACCTCGACCCCGAGTGGGACCT GTTCGCGAACATGACGAGGCTCGCCGGCCAGGCCATCGCCGCCGAGAACGGCGGCCTCACGCGCGTCCTGGGCGGGATGT CGCCGATCGATCCGCACTTCCTGAAGCGGCTGGAAGCCCGCGGCGTGATGGACCACGTCGACGTGGTCGCCGTCCACGGG TTCCCGCTGGACTGGAACCTCTGGCAGATCGACGAGTGGCCGGCCAAGGTGGACGAGATCGCCGCCGTCACCGACAAGCC CGTCTGGATCACCGAGGTCGGCGTCTCCAGCTTCGGCTCGGAAGAGGTGCAGGCCTGGGGCGTGACGAAGACCGCCGAGC TCCTGGTGGGCAAGGTCCCGACGATCCACTGGTACTCGCTGTACGACCTGCCCAAGACCTGGGAGGCCACGACCCGGCAC AAGGAGGCCGAGGGCTCGTCCTACTATCGGCACTTCCACATGGGCCTGCTGCGCGAGGACGGCTCGCCGAAGCCGTCGCT GGAGGCCTATGCGCCCCACGCGGCCGACATGGGCCTGTGCCAATGGTTCCACTTCGAGGATCACCGGCTGGACGAGGCGG TCGCCTGGATGAAGCGCCTGGGCGTGCGCAAGCTGCGCACCGGCCTCTCCTGGGCCGACAGCTTCCGGCCGGACGCCGAC CGCTGGTTCGACCGGCAGATGGAGGCTCTGGCGGACTTCGACGTCACCGTCACCTTCTGCTTCACCCCCGAGCACCGCGG GATCGAGCCGCACCACACGAGCCCGCCGCAGGTCGCCGAGGAGTTCGCCGAGTTCTGTGCATCCATGGTTCGGCGCTATG CGCCCGCCACGGCCGGCCGGGCCGCCTTCGCGGCGGAGTGA
Upstream 100 bases:
>100_bases ATCCGGAGGAGGAGGTGTTCGTCTGCCGGGTGACCGAACGGCCGAAGCCCTGGGGCGCCGTCTATCCGGCCCGGCCGCGA ACCAACGGGAAGGGGCACGC
Downstream 100 bases:
>100_bases CGATGCAGGGCTTCTCGCCCAACTTCAGCTGGATCACCCATGACCTCGCGGTGGGCGGCGCCTTCCCGCGCGGCGCGGCG GCGATCCTGGCCAAGGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleoside Diphosphate Epimerase Protein; Beta-Xylosidase; Transglycosidase
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MIEAAKIWNEPNNKSHWDPNLDPEWDLFANMTRLAGQAIAAENGGLTRVLGGMSPIDPHFLKRLEARGVMDHVDVVAVHG FPLDWNLWQIDEWPAKVDEIAAVTDKPVWITEVGVSSFGSEEVQAWGVTKTAELLVGKVPTIHWYSLYDLPKTWEATTRH KEAEGSSYYRHFHMGLLREDGSPKPSLEAYAPHAADMGLCQWFHFEDHRLDEAVAWMKRLGVRKLRTGLSWADSFRPDAD RWFDRQMEALADFDVTVTFCFTPEHRGIEPHHTSPPQVAEEFAEFCASMVRRYAPATAGRAAFAAE
Sequences:
>Translated_306_residues MIEAAKIWNEPNNKSHWDPNLDPEWDLFANMTRLAGQAIAAENGGLTRVLGGMSPIDPHFLKRLEARGVMDHVDVVAVHG FPLDWNLWQIDEWPAKVDEIAAVTDKPVWITEVGVSSFGSEEVQAWGVTKTAELLVGKVPTIHWYSLYDLPKTWEATTRH KEAEGSSYYRHFHMGLLREDGSPKPSLEAYAPHAADMGLCQWFHFEDHRLDEAVAWMKRLGVRKLRTGLSWADSFRPDAD RWFDRQMEALADFDVTVTFCFTPEHRGIEPHHTSPPQVAEEFAEFCASMVRRYAPATAGRAAFAAE >Mature_306_residues MIEAAKIWNEPNNKSHWDPNLDPEWDLFANMTRLAGQAIAAENGGLTRVLGGMSPIDPHFLKRLEARGVMDHVDVVAVHG FPLDWNLWQIDEWPAKVDEIAAVTDKPVWITEVGVSSFGSEEVQAWGVTKTAELLVGKVPTIHWYSLYDLPKTWEATTRH KEAEGSSYYRHFHMGLLREDGSPKPSLEAYAPHAADMGLCQWFHFEDHRLDEAVAWMKRLGVRKLRTGLSWADSFRPDAD RWFDRQMEALADFDVTVTFCFTPEHRGIEPHHTSPPQVAEEFAEFCASMVRRYAPATAGRAAFAAE
Specific function: Unknown
COG id: COG3664
COG function: function code G; Beta-xylosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34698; Mature: 34698
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEAAKIWNEPNNKSHWDPNLDPEWDLFANMTRLAGQAIAAENGGLTRVLGGMSPIDPHF CCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHH LKRLEARGVMDHVDVVAVHGFPLDWNLWQIDEWPAKVDEIAAVTDKPVWITEVGVSSFGS HHHHHHCCCHHHCCEEEEECCCCCCCEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCC EEVQAWGVTKTAELLVGKVPTIHWYSLYDLPKTWEATTRHKEAEGSSYYRHFHMGLLRED HHHHHCCCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCC GSPKPSLEAYAPHAADMGLCQWFHFEDHRLDEAVAWMKRLGVRKLRTGLSWADSFRPDAD CCCCCCCHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHH RWFDRQMEALADFDVTVTFCFTPEHRGIEPHHTSPPQVAEEFAEFCASMVRRYAPATAGR HHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC AAFAAE CHHCCC >Mature Secondary Structure MIEAAKIWNEPNNKSHWDPNLDPEWDLFANMTRLAGQAIAAENGGLTRVLGGMSPIDPHF CCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHH LKRLEARGVMDHVDVVAVHGFPLDWNLWQIDEWPAKVDEIAAVTDKPVWITEVGVSSFGS HHHHHHCCCHHHCCEEEEECCCCCCCEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCC EEVQAWGVTKTAELLVGKVPTIHWYSLYDLPKTWEATTRHKEAEGSSYYRHFHMGLLRED HHHHHCCCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCC GSPKPSLEAYAPHAADMGLCQWFHFEDHRLDEAVAWMKRLGVRKLRTGLSWADSFRPDAD CCCCCCCHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHH RWFDRQMEALADFDVTVTFCFTPEHRGIEPHHTSPPQVAEEFAEFCASMVRRYAPATAGR HHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC AAFAAE CHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA