| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197105547
Identifier: 197105547
GI number: 197105547
Start: 2336298
End: 2337395
Strand: Reverse
Name: 197105547
Synonym: PHZ_c2084
Alternate gene names: NA
Gene position: 2337395-2336298 (Counterclockwise)
Preceding gene: 197105548
Following gene: 197105546
Centisome position: 58.49
GC content: 73.22
Gene sequence:
>1098_bases GTGAAGCTGGTCGTCCTTGGCCTGACGCTGTCGTCCTCCTGGGGCAACGGCCACGCCACCACCTACCGGGCGCTGCTGCG GGCCTTCGCGGCGCGCGGCCATCAGGTGGTGTTCCTGGAGCGCGACGCCCCCTGGTACGCGAGCCACCGCGACCTGCCCG AGCCCGGCTTCTGCCAGCTCGCCCTCTATCGCGATCTCGAAGAGCTGAGGCGACATTGGGCGGGCGCGGTCGAGCGCGCC GACGCCGTGATCGTCGGCTCGTACGTCCCCGAGGGCGTCGAGGTCGGCCGCTGGGTGCAGGCGACCGCACGGGGCGTGAC CGCCTTCTACGACATCGACACCCCGGTCACCCTGGCCAAACTGGCGGCGGGCGACCACGAGTATCTCTCGCCGGAGGTCA TTCCCGGCTATGGCGTCTATCTCTCCTTCACGGGCGGTCCGACCCTGCGCGAACTGGAGCGGCGCTACGGCTCCCCGGCG GCGCGGGCGCTCTACTGCTCGGTGGACGAGGAGGCCTACCGGCCCACGCCGACGCCCCACCGCTGGGATCTCAGCTACCT CGGCACCTACAGCCCGGACCGCCAGCCGACGCTCGAGCGCCTGCTGCTGGAGCCCGCCCGGCGCGCGCCGCACCTGCGGT TCTGCGTCGCCGGACCCCAGTATCCCGCCGACATCGACTGGCCGGCCAACGTCGAGCGTCTGGAGCACGTGCCGCCCGCC GAGCACCCGGCGTTCTACTCGGCCAGCCGGTTCGCGCTGAACGTCACCCGAGCCGACATGATCGCGGCGGGCTGGAGCCC CAGCGTGCGGCTGTTCGAGGCCGGCGCCTGCGCCGCCCCGCTGATCTCCGACGTCTGGGAGGGACTGGAGACGCTGTTCG AGCCCGGGCGCGAGATCGTCCTGGCGGAGGCGCCGGACGAGGTGCTGGCGGCGCTCGCCATGCCGGACGCCGCGCGCGAC GCGATGGCCGAGGGCGCGCGCCGGCGGATCCTTTGCGGGCACACCGCCGTCCACCGGGCGGCCGAGCTGGAGGCGCATCT GTCGGCGGCCGGGGCTCGCAACTCTCCTGAACTTCTGCTGGCAGGCGACGGGCGCTGA
Upstream 100 bases:
>100_bases GCCAGCGGATCGCCTCCGAGCACACCTACGCCCGCCGGGCCGCCGAGGTGGACGCCCTCCTCAGGCAGGAAGCCGCCGCC AGGCGGGAAAGGAGCCTCGC
Downstream 100 bases:
>100_bases AGGGTTTTTCCATGAAGAACGGACACGGCAAGAACATCCTCGTCGCCGGCGGCGCGGGCTTCCTGGGCTCCCACCTGTGC GAGCGCCTGGCGGCCGAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MKLVVLGLTLSSSWGNGHATTYRALLRAFAARGHQVVFLERDAPWYASHRDLPEPGFCQLALYRDLEELRRHWAGAVERA DAVIVGSYVPEGVEVGRWVQATARGVTAFYDIDTPVTLAKLAAGDHEYLSPEVIPGYGVYLSFTGGPTLRELERRYGSPA ARALYCSVDEEAYRPTPTPHRWDLSYLGTYSPDRQPTLERLLLEPARRAPHLRFCVAGPQYPADIDWPANVERLEHVPPA EHPAFYSASRFALNVTRADMIAAGWSPSVRLFEAGACAAPLISDVWEGLETLFEPGREIVLAEAPDEVLAALAMPDAARD AMAEGARRRILCGHTAVHRAAELEAHLSAAGARNSPELLLAGDGR
Sequences:
>Translated_365_residues MKLVVLGLTLSSSWGNGHATTYRALLRAFAARGHQVVFLERDAPWYASHRDLPEPGFCQLALYRDLEELRRHWAGAVERA DAVIVGSYVPEGVEVGRWVQATARGVTAFYDIDTPVTLAKLAAGDHEYLSPEVIPGYGVYLSFTGGPTLRELERRYGSPA ARALYCSVDEEAYRPTPTPHRWDLSYLGTYSPDRQPTLERLLLEPARRAPHLRFCVAGPQYPADIDWPANVERLEHVPPA EHPAFYSASRFALNVTRADMIAAGWSPSVRLFEAGACAAPLISDVWEGLETLFEPGREIVLAEAPDEVLAALAMPDAARD AMAEGARRRILCGHTAVHRAAELEAHLSAAGARNSPELLLAGDGR >Mature_365_residues MKLVVLGLTLSSSWGNGHATTYRALLRAFAARGHQVVFLERDAPWYASHRDLPEPGFCQLALYRDLEELRRHWAGAVERA DAVIVGSYVPEGVEVGRWVQATARGVTAFYDIDTPVTLAKLAAGDHEYLSPEVIPGYGVYLSFTGGPTLRELERRYGSPA ARALYCSVDEEAYRPTPTPHRWDLSYLGTYSPDRQPTLERLLLEPARRAPHLRFCVAGPQYPADIDWPANVERLEHVPPA EHPAFYSASRFALNVTRADMIAAGWSPSVRLFEAGACAAPLISDVWEGLETLFEPGREIVLAEAPDEVLAALAMPDAARD AMAEGARRRILCGHTAVHRAAELEAHLSAAGARNSPELLLAGDGR
Specific function: Unknown
COG id: COG4641
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40042; Mature: 40042
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVVLGLTLSSSWGNGHATTYRALLRAFAARGHQVVFLERDAPWYASHRDLPEPGFCQL CEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEH ALYRDLEELRRHWAGAVERADAVIVGSYVPEGVEVGRWVQATARGVTAFYDIDTPVTLAK HHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHH LAAGDHEYLSPEVIPGYGVYLSFTGGPTLRELERRYGSPAARALYCSVDEEAYRPTPTPH HHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCHHHCCCCCCCC RWDLSYLGTYSPDRQPTLERLLLEPARRAPHLRFCVAGPQYPADIDWPANVERLEHVPPA CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCC EHPAFYSASRFALNVTRADMIAAGWSPSVRLFEAGACAAPLISDVWEGLETLFEPGREIV CCCCCCCCCCEEEEEEHHHHEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEE LAEAPDEVLAALAMPDAARDAMAEGARRRILCGHTAVHRAAELEAHLSAAGARNSPELLL EECCCHHHHHHHHCCHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEE AGDGR ECCCC >Mature Secondary Structure MKLVVLGLTLSSSWGNGHATTYRALLRAFAARGHQVVFLERDAPWYASHRDLPEPGFCQL CEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEH ALYRDLEELRRHWAGAVERADAVIVGSYVPEGVEVGRWVQATARGVTAFYDIDTPVTLAK HHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHH LAAGDHEYLSPEVIPGYGVYLSFTGGPTLRELERRYGSPAARALYCSVDEEAYRPTPTPH HHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCHHHCCCCCCCC RWDLSYLGTYSPDRQPTLERLLLEPARRAPHLRFCVAGPQYPADIDWPANVERLEHVPPA CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCC EHPAFYSASRFALNVTRADMIAAGWSPSVRLFEAGACAAPLISDVWEGLETLFEPGREIV CCCCCCCCCCEEEEEEHHHHEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEE LAEAPDEVLAALAMPDAARDAMAEGARRRILCGHTAVHRAAELEAHLSAAGARNSPELLL EECCCHHHHHHHHCCHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEE AGDGR ECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA