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The map label for this gene is atoS [C]

Identifier: 197105541

GI number: 197105541

Start: 2324935

End: 2327019

Strand: Reverse

Name: atoS [C]

Synonym: PHZ_c2078

Alternate gene names: 197105541

Gene position: 2327019-2324935 (Counterclockwise)

Preceding gene: 197105542

Following gene: 197105538

Centisome position: 58.23

GC content: 70.89

Gene sequence:

>2085_bases
GTGACGAACGCCGTCCCCGCCAGATATCCGGCAGGCCCCGGCGGGGCGGAGGCTCAGGCCCCGCCCGACCTGGACGCGCC
GCTGAAGGCCCGGATTCTCATCGTCGACGACGACGAGCGGAACGCCTTCGCCGCCGTGCAGGCGCTGGAGGATCTCGGCC
ACGAGCTCGTGGTGGCCCGGTCGGGCGAGGAGGCGCTCAAGCGCCTGCTCTCGGAGGAGTTCGCCCTCATCCTGCTCGAC
CTGCACATGCCGGGGATGGACGGCTACGAGACCGCGGCGCTGATCCGTTCGCGCAAGCGCACGGCCGACACGCCGATCGT
CTTCCTGACGGCGATCTTCCGGGACGAGGCGCACATCTTCCAGGCCTATTCGGCCGGGGCGGTGGACGTGGTCTTCAAGC
CCGTGGACCCCTTCATCCTGAAGGCCAAGACCAAGGTCTTCGTGGACCTCTACCTCAAGACCCAGGAGGCGAACCGCCAG
TCCGCCTACAAGCAGTGGCTGCTGGACGAGCACAGCCGGGTGAAGACCGAGAAGGCCCGCGCCGAGAAGGCGCTGCGGCG
GGCCGAGGCGCAGCAGGCGGCGATCCTGAAGGCCATGCCGATCGTCTTCACCTCGCGCAGCGTCGAGCCGCCCTTTACGC
CGCTGTTCGTCTCGGAGTCGGTGAAGGAGATCACCGGCTTCCCCGCGGACCGCTTCCTGGAGGAGGCCGACTTCGGCGCC
GGCCGCATCCATCCCGACGATATCGAGCGGGTGACCAAGGCCATCACCCAGGCGGTGAAGATCGGCCACTACGCCTGCGA
GTTCCGCTGGCTCTGCGCCGACGGCCAGTACCGGGTGCTGCACGACCAGGGCGTGATCGCGCCCAGCGACGACGGCGAGG
CGCGCGAGATCTTCGGCGTCCTGCTCGACGCCACCGACCGCCGCAGCCTCGAGGAGCAGCTCGCCCAGGCCCGCAAGATG
GAGGCGGTGGGCCAGCTCACCGGCGGGGTCGCGCACGACTTCAACAACCTGCTGACCGTGGTGCTGGGCAACATCGACAT
GCTCGCCCGCAAGCAGGAGGACGAGGCCCGTCGGGCCCGGCGCATCGACGCAATCCGCCAGGCGGCCGAGCGCGGCCGCG
ACCTGACCCGACAGCTCCTGGCGTTCTCGCGCCGCCAGCACCTGTCGCCGGTGACCCTGGACGTGAACGCGCTGATCCAG
GACTTCGCGCCGCTGATGCGCCAGGCGGTCGGCGAGGCAGTGACCCTCGACCTCGAGCTGGGCGGCGACGGCGAGCCCCT
GAACACCCATGTCGATCCGACGCAGCTCGAAACCGCGCTGCTGAACCTGGCCGTGAACGCCCGCGACGCGATGCCCGAGG
GCGGGCGGCTGTGCGTGCGCACCGAGCGGCGGTCCGCGGCGGAGGGGTTGGGCTTCGTGGTCGTCGAGGTCGGCGACACC
GGCTGCGGCATGAGCCCCGAGGTGCGCGAGCGGGTGTTCGAGCCGTTCTTCACCACGAAGGAGGTCGGCAAGGGCTCGGG
CCTCGGCCTCAGCCAGGTCTACGGCTTCGTGCGCCAGTCCGACGGGGAGGTGGAGGTCGACAGCGAGCCGGGCCGGGGCA
CCGTCTTCCGCCTGCTGCTGCCCGCCACCCGGGCCAAGGCCGAGGTGCGGCCGGAGGAGACGCCCCGCGCCATTGTCGGC
GGCGCCGAGCGGATCCTGCTGGTCGAGGACGATCCCACCGTGCTCGCCCTGACGCTCGATGTGCTCACCGGCCTGGGCTA
TCAGGTGCAGACGGCGACCAACGCCTCCGAGGCGCTGCAGATCATCCATTCGGGCGCCGAGATCGACCTCCTGTTCACCG
ACGTGGTGATGCCGGGCGGGGTCAGCGGCGTCAGCCTGGCGCGCACCGCCCGCGAGCTGCGGCCGGGGCTGAAGGTGCTG
CTGACCTCCGGCTTCGTAGGCGAGCGCCAGGTGATGGAGGGCGCCGAGTTCCCGCTGCTCGACAAGCCCTACGAGACCTC
GGCCATGGCCTCCATGCTGCGCAAGCTGCTCGACCGGTCCGAGAGGAAGCGCAAGCGCGGCCGGGCCTCGGCCGCCGCCG
AATAG

Upstream 100 bases:

>100_bases
GACCACCTCATCTCGGTGCTGCGGGTCTCGATCCAGCGGGCCGACGCGATGAAGCTGGCGAGCGACACCGTCGTCTCCCT
CATGCCGCAAGCGAGCTGAT

Downstream 100 bases:

>100_bases
CTCAGTCGGTCCACGGATCCCGGGCGAGCCGCTTCAGCGCCGCCGACAGCTTGCGCGCGTGCGGCCGGTCCATCTCGGCG
TCGCGGTAGCCAGCGGAGAG

Product: sensor histidine kinase/response regulator

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 694; Mature: 693

Protein sequence:

>694_residues
MTNAVPARYPAGPGGAEAQAPPDLDAPLKARILIVDDDERNAFAAVQALEDLGHELVVARSGEEALKRLLSEEFALILLD
LHMPGMDGYETAALIRSRKRTADTPIVFLTAIFRDEAHIFQAYSAGAVDVVFKPVDPFILKAKTKVFVDLYLKTQEANRQ
SAYKQWLLDEHSRVKTEKARAEKALRRAEAQQAAILKAMPIVFTSRSVEPPFTPLFVSESVKEITGFPADRFLEEADFGA
GRIHPDDIERVTKAITQAVKIGHYACEFRWLCADGQYRVLHDQGVIAPSDDGEAREIFGVLLDATDRRSLEEQLAQARKM
EAVGQLTGGVAHDFNNLLTVVLGNIDMLARKQEDEARRARRIDAIRQAAERGRDLTRQLLAFSRRQHLSPVTLDVNALIQ
DFAPLMRQAVGEAVTLDLELGGDGEPLNTHVDPTQLETALLNLAVNARDAMPEGGRLCVRTERRSAAEGLGFVVVEVGDT
GCGMSPEVRERVFEPFFTTKEVGKGSGLGLSQVYGFVRQSDGEVEVDSEPGRGTVFRLLLPATRAKAEVRPEETPRAIVG
GAERILLVEDDPTVLALTLDVLTGLGYQVQTATNASEALQIIHSGAEIDLLFTDVVMPGGVSGVSLARTARELRPGLKVL
LTSGFVGERQVMEGAEFPLLDKPYETSAMASMLRKLLDRSERKRKRGRASAAAE

Sequences:

>Translated_694_residues
MTNAVPARYPAGPGGAEAQAPPDLDAPLKARILIVDDDERNAFAAVQALEDLGHELVVARSGEEALKRLLSEEFALILLD
LHMPGMDGYETAALIRSRKRTADTPIVFLTAIFRDEAHIFQAYSAGAVDVVFKPVDPFILKAKTKVFVDLYLKTQEANRQ
SAYKQWLLDEHSRVKTEKARAEKALRRAEAQQAAILKAMPIVFTSRSVEPPFTPLFVSESVKEITGFPADRFLEEADFGA
GRIHPDDIERVTKAITQAVKIGHYACEFRWLCADGQYRVLHDQGVIAPSDDGEAREIFGVLLDATDRRSLEEQLAQARKM
EAVGQLTGGVAHDFNNLLTVVLGNIDMLARKQEDEARRARRIDAIRQAAERGRDLTRQLLAFSRRQHLSPVTLDVNALIQ
DFAPLMRQAVGEAVTLDLELGGDGEPLNTHVDPTQLETALLNLAVNARDAMPEGGRLCVRTERRSAAEGLGFVVVEVGDT
GCGMSPEVRERVFEPFFTTKEVGKGSGLGLSQVYGFVRQSDGEVEVDSEPGRGTVFRLLLPATRAKAEVRPEETPRAIVG
GAERILLVEDDPTVLALTLDVLTGLGYQVQTATNASEALQIIHSGAEIDLLFTDVVMPGGVSGVSLARTARELRPGLKVL
LTSGFVGERQVMEGAEFPLLDKPYETSAMASMLRKLLDRSERKRKRGRASAAAE
>Mature_693_residues
TNAVPARYPAGPGGAEAQAPPDLDAPLKARILIVDDDERNAFAAVQALEDLGHELVVARSGEEALKRLLSEEFALILLDL
HMPGMDGYETAALIRSRKRTADTPIVFLTAIFRDEAHIFQAYSAGAVDVVFKPVDPFILKAKTKVFVDLYLKTQEANRQS
AYKQWLLDEHSRVKTEKARAEKALRRAEAQQAAILKAMPIVFTSRSVEPPFTPLFVSESVKEITGFPADRFLEEADFGAG
RIHPDDIERVTKAITQAVKIGHYACEFRWLCADGQYRVLHDQGVIAPSDDGEAREIFGVLLDATDRRSLEEQLAQARKME
AVGQLTGGVAHDFNNLLTVVLGNIDMLARKQEDEARRARRIDAIRQAAERGRDLTRQLLAFSRRQHLSPVTLDVNALIQD
FAPLMRQAVGEAVTLDLELGGDGEPLNTHVDPTQLETALLNLAVNARDAMPEGGRLCVRTERRSAAEGLGFVVVEVGDTG
CGMSPEVRERVFEPFFTTKEVGKGSGLGLSQVYGFVRQSDGEVEVDSEPGRGTVFRLLLPATRAKAEVRPEETPRAIVGG
AERILLVEDDPTVLALTLDVLTGLGYQVQTATNASEALQIIHSGAEIDLLFTDVVMPGGVSGVSLARTARELRPGLKVLL
TSGFVGERQVMEGAEFPLLDKPYETSAMASMLRKLLDRSERKRKRGRASAAAE

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=250, Percent_Identity=31.6, Blast_Score=123, Evalue=3e-29,
Organism=Escherichia coli, GI1790436, Length=241, Percent_Identity=29.8755186721992, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI87081816, Length=225, Percent_Identity=29.7777777777778, Blast_Score=90, Evalue=6e-19,
Organism=Escherichia coli, GI1788713, Length=362, Percent_Identity=25.9668508287293, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI48994928, Length=263, Percent_Identity=27.7566539923954, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1786600, Length=247, Percent_Identity=27.5303643724696, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI145693157, Length=269, Percent_Identity=26.0223048327138, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI87082128, Length=185, Percent_Identity=32.4324324324324, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1790346, Length=239, Percent_Identity=28.0334728033473, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1790300, Length=251, Percent_Identity=30.6772908366534, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1789149, Length=304, Percent_Identity=24.0131578947368, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 75958; Mature: 75826

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNAVPARYPAGPGGAEAQAPPDLDAPLKARILIVDDDERNAFAAVQALEDLGHELVVAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEC
SGEEALKRLLSEEFALILLDLHMPGMDGYETAALIRSRKRTADTPIVFLTAIFRDEAHIF
CCHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHCHHHHH
QAYSAGAVDVVFKPVDPFILKAKTKVFVDLYLKTQEANRQSAYKQWLLDEHSRVKTEKAR
HHHCCCCEEEEEECCCCCEEEECCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
AEKALRRAEAQQAAILKAMPIVFTSRSVEPPFTPLFVSESVKEITGFPADRFLEEADFGA
HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCC
GRIHPDDIERVTKAITQAVKIGHYACEFRWLCADGQYRVLHDQGVIAPSDDGEAREIFGV
CCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHH
LLDATDRRSLEEQLAQARKMEAVGQLTGGVAHDFNNLLTVVLGNIDMLARKQEDEARRAR
HHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHH
RIDAIRQAAERGRDLTRQLLAFSRRQHLSPVTLDVNALIQDFAPLMRQAVGEAVTLDLEL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCEEEEEEEE
GGDGEPLNTHVDPTQLETALLNLAVNARDAMPEGGRLCVRTERRSAAEGLGFVVVEVGDT
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCEEEEEECHHHHHCCCCEEEEEECCC
GCGMSPEVRERVFEPFFTTKEVGKGSGLGLSQVYGFVRQSDGEVEVDSEPGRGTVFRLLL
CCCCCHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCEEEEEEE
PATRAKAEVRPEETPRAIVGGAERILLVEDDPTVLALTLDVLTGLGYQVQTATNASEALQ
CCHHHHCCCCCCCCCHHHCCCCCEEEEEECCCCEEEEEHHHHHCCCEEEEECCCHHHHHH
IIHSGAEIDLLFTDVVMPGGVSGVSLARTARELRPGLKVLLTSGFVGERQVMEGAEFPLL
HHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEHHHCCCCCCHHHHCCCCCCCC
DKPYETSAMASMLRKLLDRSERKRKRGRASAAAE
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TNAVPARYPAGPGGAEAQAPPDLDAPLKARILIVDDDERNAFAAVQALEDLGHELVVAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEC
SGEEALKRLLSEEFALILLDLHMPGMDGYETAALIRSRKRTADTPIVFLTAIFRDEAHIF
CCHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHCHHHHH
QAYSAGAVDVVFKPVDPFILKAKTKVFVDLYLKTQEANRQSAYKQWLLDEHSRVKTEKAR
HHHCCCCEEEEEECCCCCEEEECCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
AEKALRRAEAQQAAILKAMPIVFTSRSVEPPFTPLFVSESVKEITGFPADRFLEEADFGA
HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCC
GRIHPDDIERVTKAITQAVKIGHYACEFRWLCADGQYRVLHDQGVIAPSDDGEAREIFGV
CCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHH
LLDATDRRSLEEQLAQARKMEAVGQLTGGVAHDFNNLLTVVLGNIDMLARKQEDEARRAR
HHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHH
RIDAIRQAAERGRDLTRQLLAFSRRQHLSPVTLDVNALIQDFAPLMRQAVGEAVTLDLEL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCEEEEEEEE
GGDGEPLNTHVDPTQLETALLNLAVNARDAMPEGGRLCVRTERRSAAEGLGFVVVEVGDT
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCEEEEEECHHHHHCCCCEEEEEECCC
GCGMSPEVRERVFEPFFTTKEVGKGSGLGLSQVYGFVRQSDGEVEVDSEPGRGTVFRLLL
CCCCCHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCEEEEEEE
PATRAKAEVRPEETPRAIVGGAERILLVEDDPTVLALTLDVLTGLGYQVQTATNASEALQ
CCHHHHCCCCCCCCCHHHCCCCCEEEEEECCCCEEEEEHHHHHCCCEEEEECCCHHHHHH
IIHSGAEIDLLFTDVVMPGGVSGVSLARTARELRPGLKVLLTSGFVGERQVMEGAEFPLL
HHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEHHHCCCCCCHHHHCCCCCCCC
DKPYETSAMASMLRKLLDRSERKRKRGRASAAAE
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA