| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is cysI [H]
Identifier: 197105505
GI number: 197105505
Start: 2285042
End: 2286709
Strand: Reverse
Name: cysI [H]
Synonym: PHZ_c2042
Alternate gene names: 197105505
Gene position: 2286709-2285042 (Counterclockwise)
Preceding gene: 197105506
Following gene: 197105504
Centisome position: 57.22
GC content: 69.42
Gene sequence:
>1668_bases GTGAGGGCGGCCATGTACCGCTACGACGCCATCGACAAGGACTTCGTCGCCGACCGGACGGCGGAGTTCCGCGAACAGGT CGCCCGCCGCCTGGCCGGCGAGATCACCGAGGAGCAGTTCAAGCCGATCCGGCTGATGAACGGCCTCTACCTGCAGCTCC ACGCCTACATGCTGCGGATCGCGATCCCCTACGGCACGCTGACCTCGAAGAAGCTGCGCAAGCTGGCCTGGATCGCTTCG ACCTACGACAAGGGCTACGGCCACTTCACGACCCGGACCAACCTCCAGCTCCACTGGATCAAGCTGAAGGACGCCCCCGA GATCCTGGGGCATCTGGCCGACGTCGAGATGCACGCCATGCAGACCTCGGGCAACGTGGTCCGCAACGTGACCGCCGACC CCTATGCCGGCGCGACGGCCGACGAGCTGGACGACCCGCGCGTCTGGGCCGAGGCGATCCGCCAGTGGTCGACTCTGCAC CCCGAGTTCAGCTTCCTGCCGCGCAAGTTCAAGATCGCCGTGACCGCGGCCGCCAAGGACCGCACCGCGGCCAAGATCTA CGACATCGGCCTGGCCATGCGCCGGGGCCGCGACGGCGAGCTGGGCTTCGAGGTGATGGTGGGCGGGGGCCTGGGCCGCA CCCCGTACCTGGGCGCGACGATCCGCGAGTTCCTGCCGACCCGCCACCTTCTGTCGTACCTGGAGGCGATCCTGCGGGTC TACAACCGCTACGGACGCCGCGACAACATCTGGAAGGCGCGCATCAAGGTGCTGGTCGCCTCGCTGGGCGCCGAGGAGTT CGCCCGCCAGGTCGAGGCCGAATGGGCCAAGTCCGACCCCGGCCACGCCGACCTGCCCGACATCGAGCTCGCCCGCATCC GCACCGACTTCCGGCCGGCGTTCGAGACGCTGCCCGCGCGCTCGGAGGCGCTGGAGACCGCCAAGGCCTCCAACCCCGCC TTCGCCCGCTTCCTCCGGCACAACGTCCACCCGCACAAGCAGCCGGGCTACGCCATCGTCGACGTCTCGCTGAAGACGCC GGGCCAGACGCCGGGCGACATCACCTCGGGCCAGATGGAGGTCGTCGCCGACCTCGCCGAGCGCTACTCGCTGGACGAGG TGCGGGTGAACTACCAGCAGAACCTGCTGCTGCCGCACGTGAAGCTGGACGACCTGCCGACCGTCTGGGCGGCGCTGGAG GCCGCCGGGCTCGCCACGCCGAACATCGACCTGATCAGCGACATCATCGCCTGCCCGGGCCTCGACTACTGCGCCCTGGC CAACGCCCGGGCGATCCCGGTGGCCCAGCACATCGCAGAGCGCTTCGCCGATCCCGAGCGGGCCGAGACGATCGGCGAGC TGAAGATCAAGATCAGCGGCTGCATCAACGCCTGCGGCCACCACCACGTCGGCCACATCGGCATCCTGGGCGTCGATAAG AAGGGCGAGGAGTTCTACCAGGTCACCCTGGGCGGCTCGGGCGAGGACGACGCGGCCCTGGGCCAGATCCTCGGTCCGGC GCTGCCCGCCGACAAGGTCACCGAGGCCGTCGAGCAGATGGTCGAGGTCTACCTGCGCGAGCGCCGCGACGGCGAGCGCT TCCTCGACACCTTCCGCCGCACGGGCGTGGCGCCGTTCAAGGAGGCCGTCTATGCCGACGCACATTAG
Upstream 100 bases:
>100_bases AGCACGGCAAGCAGGCCGCGGGCGGCGAGGACATCGCGGCCCTGCGGCGCGCCCATGGCGCGGCCCGTTCCACCGGCCGC GTCGCCCTGATCAAGCGCAA
Downstream 100 bases:
>100_bases GCTGCGCGACGGGCGCATGGCGCCTGTCGAGGACCCCTTCACCTACGTCGCCGACGACCAGGAACTCGTCCCCGGCGACG TGATCCTGTCGCTGACCCGC
Product: sulfite reductase (NADPH) hemoprotein beta-component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 555; Mature: 555
Protein sequence:
>555_residues MRAAMYRYDAIDKDFVADRTAEFREQVARRLAGEITEEQFKPIRLMNGLYLQLHAYMLRIAIPYGTLTSKKLRKLAWIAS TYDKGYGHFTTRTNLQLHWIKLKDAPEILGHLADVEMHAMQTSGNVVRNVTADPYAGATADELDDPRVWAEAIRQWSTLH PEFSFLPRKFKIAVTAAAKDRTAAKIYDIGLAMRRGRDGELGFEVMVGGGLGRTPYLGATIREFLPTRHLLSYLEAILRV YNRYGRRDNIWKARIKVLVASLGAEEFARQVEAEWAKSDPGHADLPDIELARIRTDFRPAFETLPARSEALETAKASNPA FARFLRHNVHPHKQPGYAIVDVSLKTPGQTPGDITSGQMEVVADLAERYSLDEVRVNYQQNLLLPHVKLDDLPTVWAALE AAGLATPNIDLISDIIACPGLDYCALANARAIPVAQHIAERFADPERAETIGELKIKISGCINACGHHHVGHIGILGVDK KGEEFYQVTLGGSGEDDAALGQILGPALPADKVTEAVEQMVEVYLRERRDGERFLDTFRRTGVAPFKEAVYADAH
Sequences:
>Translated_555_residues MRAAMYRYDAIDKDFVADRTAEFREQVARRLAGEITEEQFKPIRLMNGLYLQLHAYMLRIAIPYGTLTSKKLRKLAWIAS TYDKGYGHFTTRTNLQLHWIKLKDAPEILGHLADVEMHAMQTSGNVVRNVTADPYAGATADELDDPRVWAEAIRQWSTLH PEFSFLPRKFKIAVTAAAKDRTAAKIYDIGLAMRRGRDGELGFEVMVGGGLGRTPYLGATIREFLPTRHLLSYLEAILRV YNRYGRRDNIWKARIKVLVASLGAEEFARQVEAEWAKSDPGHADLPDIELARIRTDFRPAFETLPARSEALETAKASNPA FARFLRHNVHPHKQPGYAIVDVSLKTPGQTPGDITSGQMEVVADLAERYSLDEVRVNYQQNLLLPHVKLDDLPTVWAALE AAGLATPNIDLISDIIACPGLDYCALANARAIPVAQHIAERFADPERAETIGELKIKISGCINACGHHHVGHIGILGVDK KGEEFYQVTLGGSGEDDAALGQILGPALPADKVTEAVEQMVEVYLRERRDGERFLDTFRRTGVAPFKEAVYADAH >Mature_555_residues MRAAMYRYDAIDKDFVADRTAEFREQVARRLAGEITEEQFKPIRLMNGLYLQLHAYMLRIAIPYGTLTSKKLRKLAWIAS TYDKGYGHFTTRTNLQLHWIKLKDAPEILGHLADVEMHAMQTSGNVVRNVTADPYAGATADELDDPRVWAEAIRQWSTLH PEFSFLPRKFKIAVTAAAKDRTAAKIYDIGLAMRRGRDGELGFEVMVGGGLGRTPYLGATIREFLPTRHLLSYLEAILRV YNRYGRRDNIWKARIKVLVASLGAEEFARQVEAEWAKSDPGHADLPDIELARIRTDFRPAFETLPARSEALETAKASNPA FARFLRHNVHPHKQPGYAIVDVSLKTPGQTPGDITSGQMEVVADLAERYSLDEVRVNYQQNLLLPHVKLDDLPTVWAALE AAGLATPNIDLISDIIACPGLDYCALANARAIPVAQHIAERFADPERAETIGELKIKISGCINACGHHHVGHIGILGVDK KGEEFYQVTLGGSGEDDAALGQILGPALPADKVTEAVEQMVEVYLRERRDGERFLDTFRRTGVAPFKEAVYADAH
Specific function: This Enzyme Catalyzes The 6-Electron Reduction Of Sulfite To Sulfide. This Is One Of Several Activities Required For The Biosynthesis Of L-Cysteine From Sulfate. [C]
COG id: COG0155
COG function: function code P; Sulfite reductase, beta subunit (hemoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family [H]
Homologues:
Organism=Escherichia coli, GI1789122, Length=289, Percent_Identity=25.6055363321799, Blast_Score=73, Evalue=4e-14,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005117 - InterPro: IPR006067 - InterPro: IPR006066 [H]
Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr [H]
EC number: =1.8.7.1 [H]
Molecular weight: Translated: 61857; Mature: 61857
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAAMYRYDAIDKDFVADRTAEFREQVARRLAGEITEEQFKPIRLMNGLYLQLHAYMLRI CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AIPYGTLTSKKLRKLAWIASTYDKGYGHFTTRTNLQLHWIKLKDAPEILGHLADVEMHAM CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEEEECCCHHHHHHHHHHHHHHH QTSGNVVRNVTADPYAGATADELDDPRVWAEAIRQWSTLHPEFSFLPRKFKIAVTAAAKD HCCCCEEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCHHHCCCEEEEEEEECCCC RTAAKIYDIGLAMRRGRDGELGFEVMVGGGLGRTPYLGATIREFLPTRHLLSYLEAILRV CCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHH YNRYGRRDNIWKARIKVLVASLGAEEFARQVEAEWAKSDPGHADLPDIELARIRTDFRPA HHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH FETLPARSEALETAKASNPAFARFLRHNVHPHKQPGYAIVDVSLKTPGQTPGDITSGQME HHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHH VVADLAERYSLDEVRVNYQQNLLLPHVKLDDLPTVWAALEAAGLATPNIDLISDIIACPG HHHHHHHHCCHHHHHHCHHHCEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCC LDYCALANARAIPVAQHIAERFADPERAETIGELKIKISGCINACGHHHVGHIGILGVDK CCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHEEEEEHHHHHHCCCCCCCEEEEEECCC KGEEFYQVTLGGSGEDDAALGQILGPALPADKVTEAVEQMVEVYLRERRDGERFLDTFRR CCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TGVAPFKEAVYADAH CCCCHHHHHHHCCCC >Mature Secondary Structure MRAAMYRYDAIDKDFVADRTAEFREQVARRLAGEITEEQFKPIRLMNGLYLQLHAYMLRI CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AIPYGTLTSKKLRKLAWIASTYDKGYGHFTTRTNLQLHWIKLKDAPEILGHLADVEMHAM CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEEEECCCHHHHHHHHHHHHHHH QTSGNVVRNVTADPYAGATADELDDPRVWAEAIRQWSTLHPEFSFLPRKFKIAVTAAAKD HCCCCEEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCHHHCCCEEEEEEEECCCC RTAAKIYDIGLAMRRGRDGELGFEVMVGGGLGRTPYLGATIREFLPTRHLLSYLEAILRV CCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHH YNRYGRRDNIWKARIKVLVASLGAEEFARQVEAEWAKSDPGHADLPDIELARIRTDFRPA HHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH FETLPARSEALETAKASNPAFARFLRHNVHPHKQPGYAIVDVSLKTPGQTPGDITSGQME HHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHH VVADLAERYSLDEVRVNYQQNLLLPHVKLDDLPTVWAALEAAGLATPNIDLISDIIACPG HHHHHHHHCCHHHHHHCHHHCEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCC LDYCALANARAIPVAQHIAERFADPERAETIGELKIKISGCINACGHHHVGHIGILGVDK CCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHEEEEEHHHHHHCCCCCCCEEEEEECCC KGEEFYQVTLGGSGEDDAALGQILGPALPADKVTEAVEQMVEVYLRERRDGERFLDTFRR CCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TGVAPFKEAVYADAH CCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA