| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is artJ [H]
Identifier: 197105461
GI number: 197105461
Start: 2231536
End: 2232318
Strand: Reverse
Name: artJ [H]
Synonym: PHZ_c1998
Alternate gene names: 197105461
Gene position: 2232318-2231536 (Counterclockwise)
Preceding gene: 197105462
Following gene: 197105460
Centisome position: 55.86
GC content: 72.03
Gene sequence:
>783_bases ATGCGGCATGATCCGGGCGGCGGCTGGTCGCGGCGGAGCGCGCTCGCCGGCCTTGGGGCCGGCCTGCTCGTCACGGGCGG CTGCGCCGAGCGGACCGACGTGCGCGCCGCCGGCGGCTTCATCGTCGGCTCTTCGGCCACAGGCGTTCCGTTCAGCTTCC TGGACGTGGAGACCAACGCCTTGACGGGGGCGATGATCGACATCGTCGAGGCCACGGCCGCCGAGGCCGGCGCGCCGGTC GCCCTTCAGGTCGTGCCGTTCTCCGCCCTCATCCCGTCGCTGACGGCGCGCAAGATCGACGTGATCGCGGCGGCGATGCT CCGCACGCCCGAGCGCGAGCGGATCGTGGCGTTCTCCGACCCGGTCTACGCCTACGGCGGGGGGCTGGTGGTCGCCGCCG GGAACCCGCGGGACTATGGCCGCCTGGAGGACCTTCGCGGGCTGCGGGTGGGCGCCCAGGTCGGCTCGCGCTTCGTCGAT CAGCTCAAGGCCGCGGGCGTGTCCGGGGTGAAGACCTACGACAACCTGAGCGACATCCTGCGAGACGTCCGGCTGAAGCG GCTGGACGCCGCCTACGGCGACGAGCCGATCCTGCGGTATTACCTGCGGGTCACGCGCAGCAAGGCCCTGCGCCTCGTCG AGAGCTACCGGCCGACGGCGCTCGAGGATGTGTGCCTGATCCTGCGGAAGGACGATCGCGCGCTGCTCGACCGGATCAAC ACGGCGATCGCGGCGATCCGCGGCTCGACCCTCCCGCCCATCCTCGCCAAGTGGGGACTCTGA
Upstream 100 bases:
>100_bases GCGCCCTTCGGCGGCGTGAAGGAGTCCGGTCTCGGCCGGGAAGGCTCGCTATATGGCGTCCGCGACTACATCGAGACGAA GTCGCTCTGCTTCCATGTCG
Downstream 100 bases:
>100_bases TGGGAGACTTCCTGAGCCAGGCCATCAGCTTCCTGCCCATCCTCGGGCGGGGGATGGGCGTCACCGTCCTGATCAGCCTG GGCGCCCTGGCGCTCAGCCT
Product: cystine ABC transporter, periplasmic cystine-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MRHDPGGGWSRRSALAGLGAGLLVTGGCAERTDVRAAGGFIVGSSATGVPFSFLDVETNALTGAMIDIVEATAAEAGAPV ALQVVPFSALIPSLTARKIDVIAAAMLRTPERERIVAFSDPVYAYGGGLVVAAGNPRDYGRLEDLRGLRVGAQVGSRFVD QLKAAGVSGVKTYDNLSDILRDVRLKRLDAAYGDEPILRYYLRVTRSKALRLVESYRPTALEDVCLILRKDDRALLDRIN TAIAAIRGSTLPPILAKWGL
Sequences:
>Translated_260_residues MRHDPGGGWSRRSALAGLGAGLLVTGGCAERTDVRAAGGFIVGSSATGVPFSFLDVETNALTGAMIDIVEATAAEAGAPV ALQVVPFSALIPSLTARKIDVIAAAMLRTPERERIVAFSDPVYAYGGGLVVAAGNPRDYGRLEDLRGLRVGAQVGSRFVD QLKAAGVSGVKTYDNLSDILRDVRLKRLDAAYGDEPILRYYLRVTRSKALRLVESYRPTALEDVCLILRKDDRALLDRIN TAIAAIRGSTLPPILAKWGL >Mature_260_residues MRHDPGGGWSRRSALAGLGAGLLVTGGCAERTDVRAAGGFIVGSSATGVPFSFLDVETNALTGAMIDIVEATAAEAGAPV ALQVVPFSALIPSLTARKIDVIAAAMLRTPERERIVAFSDPVYAYGGGLVVAAGNPRDYGRLEDLRGLRVGAQVGSRFVD QLKAAGVSGVKTYDNLSDILRDVRLKRLDAAYGDEPILRYYLRVTRSKALRLVESYRPTALEDVCLILRKDDRALLDRIN TAIAAIRGSTLPPILAKWGL
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=252, Percent_Identity=27.7777777777778, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1788228, Length=265, Percent_Identity=28.3018867924528, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787088, Length=258, Percent_Identity=27.1317829457364, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787031, Length=249, Percent_Identity=24.8995983935743, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1788648, Length=227, Percent_Identity=29.0748898678414, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1788649, Length=228, Percent_Identity=29.3859649122807, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 27648; Mature: 27648
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHDPGGGWSRRSALAGLGAGLLVTGGCAERTDVRAAGGFIVGSSATGVPFSFLDVETNA CCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCH LTGAMIDIVEATAAEAGAPVALQVVPFSALIPSLTARKIDVIAAAMLRTPERERIVAFSD HHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECC PVYAYGGGLVVAAGNPRDYGRLEDLRGLRVGAQVGSRFVDQLKAAGVSGVKTYDNLSDIL CEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH RDVRLKRLDAAYGDEPILRYYLRVTRSKALRLVESYRPTALEDVCLILRKDDRALLDRIN HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHH TAIAAIRGSTLPPILAKWGL HHHHHHCCCCCCHHHHHCCC >Mature Secondary Structure MRHDPGGGWSRRSALAGLGAGLLVTGGCAERTDVRAAGGFIVGSSATGVPFSFLDVETNA CCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCH LTGAMIDIVEATAAEAGAPVALQVVPFSALIPSLTARKIDVIAAAMLRTPERERIVAFSD HHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECC PVYAYGGGLVVAAGNPRDYGRLEDLRGLRVGAQVGSRFVDQLKAAGVSGVKTYDNLSDIL CEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH RDVRLKRLDAAYGDEPILRYYLRVTRSKALRLVESYRPTALEDVCLILRKDDRALLDRIN HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHH TAIAAIRGSTLPPILAKWGL HHHHHHCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]