Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is artJ [H]

Identifier: 197105461

GI number: 197105461

Start: 2231536

End: 2232318

Strand: Reverse

Name: artJ [H]

Synonym: PHZ_c1998

Alternate gene names: 197105461

Gene position: 2232318-2231536 (Counterclockwise)

Preceding gene: 197105462

Following gene: 197105460

Centisome position: 55.86

GC content: 72.03

Gene sequence:

>783_bases
ATGCGGCATGATCCGGGCGGCGGCTGGTCGCGGCGGAGCGCGCTCGCCGGCCTTGGGGCCGGCCTGCTCGTCACGGGCGG
CTGCGCCGAGCGGACCGACGTGCGCGCCGCCGGCGGCTTCATCGTCGGCTCTTCGGCCACAGGCGTTCCGTTCAGCTTCC
TGGACGTGGAGACCAACGCCTTGACGGGGGCGATGATCGACATCGTCGAGGCCACGGCCGCCGAGGCCGGCGCGCCGGTC
GCCCTTCAGGTCGTGCCGTTCTCCGCCCTCATCCCGTCGCTGACGGCGCGCAAGATCGACGTGATCGCGGCGGCGATGCT
CCGCACGCCCGAGCGCGAGCGGATCGTGGCGTTCTCCGACCCGGTCTACGCCTACGGCGGGGGGCTGGTGGTCGCCGCCG
GGAACCCGCGGGACTATGGCCGCCTGGAGGACCTTCGCGGGCTGCGGGTGGGCGCCCAGGTCGGCTCGCGCTTCGTCGAT
CAGCTCAAGGCCGCGGGCGTGTCCGGGGTGAAGACCTACGACAACCTGAGCGACATCCTGCGAGACGTCCGGCTGAAGCG
GCTGGACGCCGCCTACGGCGACGAGCCGATCCTGCGGTATTACCTGCGGGTCACGCGCAGCAAGGCCCTGCGCCTCGTCG
AGAGCTACCGGCCGACGGCGCTCGAGGATGTGTGCCTGATCCTGCGGAAGGACGATCGCGCGCTGCTCGACCGGATCAAC
ACGGCGATCGCGGCGATCCGCGGCTCGACCCTCCCGCCCATCCTCGCCAAGTGGGGACTCTGA

Upstream 100 bases:

>100_bases
GCGCCCTTCGGCGGCGTGAAGGAGTCCGGTCTCGGCCGGGAAGGCTCGCTATATGGCGTCCGCGACTACATCGAGACGAA
GTCGCTCTGCTTCCATGTCG

Downstream 100 bases:

>100_bases
TGGGAGACTTCCTGAGCCAGGCCATCAGCTTCCTGCCCATCCTCGGGCGGGGGATGGGCGTCACCGTCCTGATCAGCCTG
GGCGCCCTGGCGCTCAGCCT

Product: cystine ABC transporter, periplasmic cystine-binding protein

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MRHDPGGGWSRRSALAGLGAGLLVTGGCAERTDVRAAGGFIVGSSATGVPFSFLDVETNALTGAMIDIVEATAAEAGAPV
ALQVVPFSALIPSLTARKIDVIAAAMLRTPERERIVAFSDPVYAYGGGLVVAAGNPRDYGRLEDLRGLRVGAQVGSRFVD
QLKAAGVSGVKTYDNLSDILRDVRLKRLDAAYGDEPILRYYLRVTRSKALRLVESYRPTALEDVCLILRKDDRALLDRIN
TAIAAIRGSTLPPILAKWGL

Sequences:

>Translated_260_residues
MRHDPGGGWSRRSALAGLGAGLLVTGGCAERTDVRAAGGFIVGSSATGVPFSFLDVETNALTGAMIDIVEATAAEAGAPV
ALQVVPFSALIPSLTARKIDVIAAAMLRTPERERIVAFSDPVYAYGGGLVVAAGNPRDYGRLEDLRGLRVGAQVGSRFVD
QLKAAGVSGVKTYDNLSDILRDVRLKRLDAAYGDEPILRYYLRVTRSKALRLVESYRPTALEDVCLILRKDDRALLDRIN
TAIAAIRGSTLPPILAKWGL
>Mature_260_residues
MRHDPGGGWSRRSALAGLGAGLLVTGGCAERTDVRAAGGFIVGSSATGVPFSFLDVETNALTGAMIDIVEATAAEAGAPV
ALQVVPFSALIPSLTARKIDVIAAAMLRTPERERIVAFSDPVYAYGGGLVVAAGNPRDYGRLEDLRGLRVGAQVGSRFVD
QLKAAGVSGVKTYDNLSDILRDVRLKRLDAAYGDEPILRYYLRVTRSKALRLVESYRPTALEDVCLILRKDDRALLDRIN
TAIAAIRGSTLPPILAKWGL

Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1787085, Length=252, Percent_Identity=27.7777777777778, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1788228, Length=265, Percent_Identity=28.3018867924528, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787088, Length=258, Percent_Identity=27.1317829457364, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787031, Length=249, Percent_Identity=24.8995983935743, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1788648, Length=227, Percent_Identity=29.0748898678414, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1788649, Length=228, Percent_Identity=29.3859649122807, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 27648; Mature: 27648

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHDPGGGWSRRSALAGLGAGLLVTGGCAERTDVRAAGGFIVGSSATGVPFSFLDVETNA
CCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCH
LTGAMIDIVEATAAEAGAPVALQVVPFSALIPSLTARKIDVIAAAMLRTPERERIVAFSD
HHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECC
PVYAYGGGLVVAAGNPRDYGRLEDLRGLRVGAQVGSRFVDQLKAAGVSGVKTYDNLSDIL
CEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RDVRLKRLDAAYGDEPILRYYLRVTRSKALRLVESYRPTALEDVCLILRKDDRALLDRIN
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHH
TAIAAIRGSTLPPILAKWGL
HHHHHHCCCCCCHHHHHCCC
>Mature Secondary Structure
MRHDPGGGWSRRSALAGLGAGLLVTGGCAERTDVRAAGGFIVGSSATGVPFSFLDVETNA
CCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCH
LTGAMIDIVEATAAEAGAPVALQVVPFSALIPSLTARKIDVIAAAMLRTPERERIVAFSD
HHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECC
PVYAYGGGLVVAAGNPRDYGRLEDLRGLRVGAQVGSRFVDQLKAAGVSGVKTYDNLSDIL
CEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RDVRLKRLDAAYGDEPILRYYLRVTRSKALRLVESYRPTALEDVCLILRKDDRALLDRIN
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHH
TAIAAIRGSTLPPILAKWGL
HHHHHHCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]