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The map label for this gene is ygeA [H]

Identifier: 197105440

GI number: 197105440

Start: 2207559

End: 2208251

Strand: Reverse

Name: ygeA [H]

Synonym: PHZ_c1977

Alternate gene names: 197105440

Gene position: 2208251-2207559 (Counterclockwise)

Preceding gene: 197105441

Following gene: 197105435

Centisome position: 55.26

GC content: 72.73

Gene sequence:

>693_bases
GTGCGGACCCTCGGCCTCATCGGCGGGATCAGCGCCGAGAGCACGGTCGTCTACTACCAGCTGCTCAACCGCCTGGTCCG
CGAGCGGCTGGGCGGCCTGCATTCGGCCAAGCTGATCCTGTGGTCGGTGGACTTCGCCCCCGTGGCCGAGCTGCAGGCCA
AGGGCGACTGGGACGAGACCGGCCGCCAGTTCGCCGAGGCCGCGCGCCGGCTGGTGGCGGCGGGCGCGGAAGGCCTGATG
ATCTGCGCCAACACCATGCACCTGAACGCGCCGCAGGTGGCCGAGGCCGGCGGCGTGCCGCTGATCCACATCGCCGATGC
GACCGCGCAGGCGCTGAAGGCGAGGGGCGTCGCCCGGCCGCTGCTGCTGGCCACGCGATTCACGATGGAGAAGCCGTTCT
ACCTCGATCGGCTGAGGGGGCAGGGGCTGGACGGCTTCGCGCCCGAGGCGGCCGACCGCGAGCGGCTGCACGCGATCATC
TACGACGAGCTCTGCCAGGGCGTGATCCGCGAGGAGTCGCGGCGCGAGGTGCTGGGGATCATCGAGCGCGGCCGCGCGGC
GGGCGCCGACGGGGTGATCTTCGGCTGCACCGAGATCGGCCTCCTGCTCGATCCGGCCGACATGGCGCTGCCCACGGTCG
ACAGCGCCGTGGCCCACTGCGAGGCGGCGGTGGAGTTCGCGCTAGGGGCCTAG

Upstream 100 bases:

>100_bases
GCGATCTGGAAGTACGTCCAGCTCGTGGGCCCCGCGCACCTCGGCGCCGTGACCCATCCGGGCCACGCTGGCGAGACGCA
CGTCTACGCGGACATCTGAG

Downstream 100 bases:

>100_bases
CCGAGGCTTAGTCGAACCGCTGGCGGTCCACGATGGCCGCCACGTCCGCGCCGCCGGGCAGGATCCCGAACGAGCGGCCG
CCCTCGTCCCCCAGCCGGGT

Product: aspartate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MRTLGLIGGISAESTVVYYQLLNRLVRERLGGLHSAKLILWSVDFAPVAELQAKGDWDETGRQFAEAARRLVAAGAEGLM
ICANTMHLNAPQVAEAGGVPLIHIADATAQALKARGVARPLLLATRFTMEKPFYLDRLRGQGLDGFAPEAADRERLHAII
YDELCQGVIREESRREVLGIIERGRAAGADGVIFGCTEIGLLLDPADMALPTVDSAVAHCEAAVEFALGA

Sequences:

>Translated_230_residues
MRTLGLIGGISAESTVVYYQLLNRLVRERLGGLHSAKLILWSVDFAPVAELQAKGDWDETGRQFAEAARRLVAAGAEGLM
ICANTMHLNAPQVAEAGGVPLIHIADATAQALKARGVARPLLLATRFTMEKPFYLDRLRGQGLDGFAPEAADRERLHAII
YDELCQGVIREESRREVLGIIERGRAAGADGVIFGCTEIGLLLDPADMALPTVDSAVAHCEAAVEFALGA
>Mature_230_residues
MRTLGLIGGISAESTVVYYQLLNRLVRERLGGLHSAKLILWSVDFAPVAELQAKGDWDETGRQFAEAARRLVAAGAEGLM
ICANTMHLNAPQVAEAGGVPLIHIADATAQALKARGVARPLLLATRFTMEKPFYLDRLRGQGLDGFAPEAADRERLHAII
YDELCQGVIREESRREVLGIIERGRAAGADGVIFGCTEIGLLLDPADMALPTVDSAVAHCEAAVEFALGA

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=229, Percent_Identity=48.471615720524, Blast_Score=213, Evalue=7e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: NA

Molecular weight: Translated: 24644; Mature: 24644

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLGLIGGISAESTVVYYQLLNRLVRERLGGLHSAKLILWSVDFAPVAELQAKGDWDET
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCHHHH
GRQFAEAARRLVAAGAEGLMICANTMHLNAPQVAEAGGVPLIHIADATAQALKARGVARP
HHHHHHHHHHHHHCCCCCEEEEECEEECCCCCHHHCCCCCEEEECCHHHHHHHHCCCHHH
LLLATRFTMEKPFYLDRLRGQGLDGFAPEAADRERLHAIIYDELCQGVIREESRREVLGI
HHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IERGRAAGADGVIFGCTEIGLLLDPADMALPTVDSAVAHCEAAVEFALGA
HHHCCCCCCCCEEEEHHHHCEEECCHHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRTLGLIGGISAESTVVYYQLLNRLVRERLGGLHSAKLILWSVDFAPVAELQAKGDWDET
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCHHHH
GRQFAEAARRLVAAGAEGLMICANTMHLNAPQVAEAGGVPLIHIADATAQALKARGVARP
HHHHHHHHHHHHHCCCCCEEEEECEEECCCCCHHHCCCCCEEEECCHHHHHHHHCCCHHH
LLLATRFTMEKPFYLDRLRGQGLDGFAPEAADRERLHAIIYDELCQGVIREESRREVLGI
HHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IERGRAAGADGVIFGCTEIGLLLDPADMALPTVDSAVAHCEAAVEFALGA
HHHCCCCCCCCEEEEHHHHCEEECCHHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]