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The map label for this gene is yajC [H]

Identifier: 197105418

GI number: 197105418

Start: 2189658

End: 2190008

Strand: Reverse

Name: yajC [H]

Synonym: PHZ_c1955

Alternate gene names: 197105418

Gene position: 2190008-2189658 (Counterclockwise)

Preceding gene: 197105420

Following gene: 197105417

Centisome position: 54.8

GC content: 67.24

Gene sequence:

>351_bases
ATGTTCGCCACCCCTGCCTATGCCCAAGCCGCCGGCGGCGCCGCCGCTGGAGGCCCCGAGGCCATGCTGATCCAGTTCCT
GCCGCTGATCGCGCTGGTCGTCCTGTTCTACTTCCTGATGATCCGGCCGCAGCAGAAGCGGATGAAGCTGCACCAGCAGA
TGCTGGGCGCTCTGAAGCGCGGCGACACCGTCGTCCTGTCCTCGGGCATGATCGGCAAGGTGGTCCGCGTCGAGGACAAG
GAAGTCGGCGTCGAGATCGCCACCGGCGTCACCGTGAAGGTGGTCAAGTCCATGGTCGCCGACGTCCGCGCCAAGGGCGA
ACCGGCCGCCGCCAACGACGCCAAGGCCTAA

Upstream 100 bases:

>100_bases
GCCCCCAGGTTCCATTGCAAAAGCGGGGCGCTGCGCATAGCTTCCGCCGACTTTCGAACGGGGCCGCAGGAAGCGGCCCC
GCCCGCAATCCGGAGAGGCC

Downstream 100 bases:

>100_bases
GCGAAAAGCCCCCTTCCGATGCTGACCCTCTCGCGCTGGAAGGTTCTCCTCGTCGTCCTGTCGGTCGTGCTGGGGGCGCT
GCTCGCGTTTCCCAACGTCG

Product: preprotein translocase, YajC subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MFATPAYAQAAGGAAAGGPEAMLIQFLPLIALVVLFYFLMIRPQQKRMKLHQQMLGALKRGDTVVLSSGMIGKVVRVEDK
EVGVEIATGVTVKVVKSMVADVRAKGEPAAANDAKA

Sequences:

>Translated_116_residues
MFATPAYAQAAGGAAAGGPEAMLIQFLPLIALVVLFYFLMIRPQQKRMKLHQQMLGALKRGDTVVLSSGMIGKVVRVEDK
EVGVEIATGVTVKVVKSMVADVRAKGEPAAANDAKA
>Mature_116_residues
MFATPAYAQAAGGAAAGGPEAMLIQFLPLIALVVLFYFLMIRPQQKRMKLHQQMLGALKRGDTVVLSSGMIGKVVRVEDK
EVGVEIATGVTVKVVKSMVADVRAKGEPAAANDAKA

Specific function: Not known; elicits an immunogenic response in mice [H]

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=98, Percent_Identity=32.6530612244898, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 12226; Mature: 12226

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFATPAYAQAAGGAAAGGPEAMLIQFLPLIALVVLFYFLMIRPQQKRMKLHQQMLGALKR
CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
GDTVVLSSGMIGKVVRVEDKEVGVEIATGVTVKVVKSMVADVRAKGEPAAANDAKA
CCEEEEECCCCCCEEEECCHHCCEEHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MFATPAYAQAAGGAAAGGPEAMLIQFLPLIALVVLFYFLMIRPQQKRMKLHQQMLGALKR
CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
GDTVVLSSGMIGKVVRVEDKEVGVEIATGVTVKVVKSMVADVRAKGEPAAANDAKA
CCEEEEECCCCCCEEEECCHHCCEEHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9826342 [H]