| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105406
Identifier: 197105406
GI number: 197105406
Start: 2175638
End: 2176336
Strand: Direct
Name: 197105406
Synonym: PHZ_c1943
Alternate gene names: NA
Gene position: 2175638-2176336 (Clockwise)
Preceding gene: 197105403
Following gene: 197105407
Centisome position: 54.44
GC content: 74.25
Gene sequence:
>699_bases ATGGACGCCCTCGACACCCTCGACTGGCCGGCGATCGAGGCCGGCCTGGACGCGCACGGATGCGCCCTCCTCCCGCGGCT GCTGGACTCCGCCACCTGCGCCGAGATCGCCGGCTGGTACGACCGGCCCGAGCTGTTCCGCAGCACGGTCGTCATGGCCC GCCACGGCTTCGGGCGGGGCGAGTACCGCTACTTCCGCTACGACCTGCCGCCCGCCGTGGCGGAGCTGCGCACGCGGCTC TATCCGCCGCTCGTCGCCATCGCGAACCGCTGGAACGGGGCCATGGGCCTGCCGGCCCGCTATCCGGAGGATCACGCCGC CTTCCTCGCCCGCTGCCACGGGGCCGGCCAGACGCGGCCGACGCCGCTGCTGCTGCGCTATGGGCCCGGCGACTACAACT GCCTGCACCAGGACCTCTACGGCGAGCACGTCTTCCCGCTGCAGGTCGCCGTGCTGCTGTCCGAGCCGGGCCGCGACTTC GAGGGCGGCGAGTTCGTCCTGACCGAGCAGCGCCCGCGGATGCAGTCGCGGGTGGAGGTCACGCCGCTGCGCCAGGGCGA CGCCGTCGTCTTCCCGGTGCGCGAGCGGCCGGTCCGGGGCGTGCGCGGCGTCTATCGCGTGAACCTGCGCCATGGCGTCA GCCGCCTGCGCGCGGGCCGGCGCCACACCCTGGGGATCATCTTCCACGACGCGGCCTGA
Upstream 100 bases:
>100_bases TCGCGGAAAGCGCCGGGCCGCCGCGGGCGTTCCCGCGCAAATCGGACCTCGCGTTCCCTCGGGCCTTGAGCGGCCGACGC CGCGGAGGGATGGAGGCGGC
Downstream 100 bases:
>100_bases TCGCGGCTTTCGGACATGTGTTGAAGAAGCTGCATTGGCCCGGGCGGGAGCGGCGCCGATGTTCCGGGCGAGCAAAGGAG ACCTTCCCATGTCCTTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MDALDTLDWPAIEAGLDAHGCALLPRLLDSATCAEIAGWYDRPELFRSTVVMARHGFGRGEYRYFRYDLPPAVAELRTRL YPPLVAIANRWNGAMGLPARYPEDHAAFLARCHGAGQTRPTPLLLRYGPGDYNCLHQDLYGEHVFPLQVAVLLSEPGRDF EGGEFVLTEQRPRMQSRVEVTPLRQGDAVVFPVRERPVRGVRGVYRVNLRHGVSRLRAGRRHTLGIIFHDAA
Sequences:
>Translated_232_residues MDALDTLDWPAIEAGLDAHGCALLPRLLDSATCAEIAGWYDRPELFRSTVVMARHGFGRGEYRYFRYDLPPAVAELRTRL YPPLVAIANRWNGAMGLPARYPEDHAAFLARCHGAGQTRPTPLLLRYGPGDYNCLHQDLYGEHVFPLQVAVLLSEPGRDF EGGEFVLTEQRPRMQSRVEVTPLRQGDAVVFPVRERPVRGVRGVYRVNLRHGVSRLRAGRRHTLGIIFHDAA >Mature_232_residues MDALDTLDWPAIEAGLDAHGCALLPRLLDSATCAEIAGWYDRPELFRSTVVMARHGFGRGEYRYFRYDLPPAVAELRTRL YPPLVAIANRWNGAMGLPARYPEDHAAFLARCHGAGQTRPTPLLLRYGPGDYNCLHQDLYGEHVFPLQVAVLLSEPGRDF EGGEFVLTEQRPRMQSRVEVTPLRQGDAVVFPVRERPVRGVRGVYRVNLRHGVSRLRAGRRHTLGIIFHDAA
Specific function: Unknown
COG id: COG3826
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018655 [H]
Pfam domain/function: PF09859 DUF2086 [H]
EC number: NA
Molecular weight: Translated: 26094; Mature: 26094
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDALDTLDWPAIEAGLDAHGCALLPRLLDSATCAEIAGWYDRPELFRSTVVMARHGFGRG CCCCCCCCCCHHHCCCCCCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC EYRYFRYDLPPAVAELRTRLYPPLVAIANRWNGAMGLPARYPEDHAAFLARCHGAGQTRP CEEEEEECCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC TPLLLRYGPGDYNCLHQDLYGEHVFPLQVAVLLSEPGRDFEGGEFVLTEQRPRMQSRVEV CEEEEEECCCCCHHHHHHHCCCCCHHHEEEEEECCCCCCCCCCEEEEECCCCCHHHCEEE TPLRQGDAVVFPVRERPVRGVRGVYRVNLRHGVSRLRAGRRHTLGIIFHDAA EECCCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHCCCCCEEEEEEECCC >Mature Secondary Structure MDALDTLDWPAIEAGLDAHGCALLPRLLDSATCAEIAGWYDRPELFRSTVVMARHGFGRG CCCCCCCCCCHHHCCCCCCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC EYRYFRYDLPPAVAELRTRLYPPLVAIANRWNGAMGLPARYPEDHAAFLARCHGAGQTRP CEEEEEECCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC TPLLLRYGPGDYNCLHQDLYGEHVFPLQVAVLLSEPGRDFEGGEFVLTEQRPRMQSRVEV CEEEEEECCCCCHHHHHHHCCCCCHHHEEEEEECCCCCCCCCCEEEEECCCCCHHHCEEE TPLRQGDAVVFPVRERPVRGVRGVYRVNLRHGVSRLRAGRRHTLGIIFHDAA EECCCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]