| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105358
Identifier: 197105358
GI number: 197105358
Start: 2121187
End: 2121954
Strand: Reverse
Name: 197105358
Synonym: PHZ_c1895
Alternate gene names: NA
Gene position: 2121954-2121187 (Counterclockwise)
Preceding gene: 197105359
Following gene: 197105357
Centisome position: 53.1
GC content: 76.56
Gene sequence:
>768_bases GTGGCGTCGCCCGGTGAGGGGCAAGCCGCGCCGCGGGTGATGTCGCTGGATTCCTGCGCCGACCAGTACGTCATGGGTCT GGCCCCGCGCGCCGCCATCGTCGGCGTCTCGACCCGGGCCGACGACGCCGATTCCCGGCTTCGCGCCCTTGCGCCCGGCC TGCCCAGGCGCCGCATCGACCTGGAGAGCGTCCTGGCCGCCCGGCCCGACGTGGTGGTCCGCTATTGGGGCGGCGAGCCC CGGCTGATCGCGGCGCTGGAGCGGCGCGGCGTGCAGGTGGTCACGATTCCCGACGCGACGGGCTTCGACGACATCCGCCG CACGGTGCGCACCGTGGCCGCCGCCCTCGATCGGCACGCCGCCGGCGAGGCCGCCATCGCCCGCATGAACGCCCAGCTCG CCCGCGCCGCCGGCGCCTGGGGCGGGGCGCGGGTCCTCTACATGACGCCGGGCGGCGTCACCGCCGGGCCGGGCACCCTC GTCGACGCCATCCTGCGGGCGGCGGGGCTGACCAACGCCGAGACCCGTCCCGGCTTCCAGACGATCTCGCTCGAGGGCCT GGCGCTGTCGCCGCCCCAGACCGTCGTGCTGGGATTTTTCGACACGTTCCAGCTCTCGGGCGACAGCTGGGGAATCGGCC GGCATCGGGTGCTCCAGACGGTGGCGCGCGAGCGCGCCGTCGCCCGCCTGCCCGGCGCCCTCCTTGGCTGTCCCGACTGG GGCGCGGGCGAGGCCGTGGCGCTGCTGGCGGCCGAGGCGCCCCGGTGA
Upstream 100 bases:
>100_bases CCCCGCGCGAGGAGCTGATGCAGGTCTCGCTGGAAGGCCTGCTGCACGGCCTCGTCATCGACTGAGCCTCGCCGCCGCCG GCGCGGCGCTCGCCCTGGCC
Downstream 100 bases:
>100_bases GGCCGCTCGTCCTCAACCTCGCGCTGGCGGCCGGCGTCCTTGCCTTCGCCGCCGCCGGCCTGCTGCTGGGCGAGACGGCG CTCAGCGGCGCCCAGTACGC
Product: iron compound ABC transporter, periplasmic substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MASPGEGQAAPRVMSLDSCADQYVMGLAPRAAIVGVSTRADDADSRLRALAPGLPRRRIDLESVLAARPDVVVRYWGGEP RLIAALERRGVQVVTIPDATGFDDIRRTVRTVAAALDRHAAGEAAIARMNAQLARAAGAWGGARVLYMTPGGVTAGPGTL VDAILRAAGLTNAETRPGFQTISLEGLALSPPQTVVLGFFDTFQLSGDSWGIGRHRVLQTVARERAVARLPGALLGCPDW GAGEAVALLAAEAPR
Sequences:
>Translated_255_residues MASPGEGQAAPRVMSLDSCADQYVMGLAPRAAIVGVSTRADDADSRLRALAPGLPRRRIDLESVLAARPDVVVRYWGGEP RLIAALERRGVQVVTIPDATGFDDIRRTVRTVAAALDRHAAGEAAIARMNAQLARAAGAWGGARVLYMTPGGVTAGPGTL VDAILRAAGLTNAETRPGFQTISLEGLALSPPQTVVLGFFDTFQLSGDSWGIGRHRVLQTVARERAVARLPGALLGCPDW GAGEAVALLAAEAPR >Mature_254_residues ASPGEGQAAPRVMSLDSCADQYVMGLAPRAAIVGVSTRADDADSRLRALAPGLPRRRIDLESVLAARPDVVVRYWGGEPR LIAALERRGVQVVTIPDATGFDDIRRTVRTVAAALDRHAAGEAAIARMNAQLARAAGAWGGARVLYMTPGGVTAGPGTLV DAILRAAGLTNAETRPGFQTISLEGLALSPPQTVVLGFFDTFQLSGDSWGIGRHRVLQTVARERAVARLPGALLGCPDWG AGEAVALLAAEAPR
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26618; Mature: 26487
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPGEGQAAPRVMSLDSCADQYVMGLAPRAAIVGVSTRADDADSRLRALAPGLPRRRID CCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCC LESVLAARPDVVVRYWGGEPRLIAALERRGVQVVTIPDATGFDDIRRTVRTVAAALDRHA HHHHHHCCCCEEEEEECCCCCEEHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC AGEAAIARMNAQLARAAGAWGGARVLYMTPGGVTAGPGTLVDAILRAAGLTNAETRPGFQ CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEE TISLEGLALSPPQTVVLGFFDTFQLSGDSWGIGRHRVLQTVARERAVARLPGALLGCPDW EEEECCEEECCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCC GAGEAVALLAAEAPR CCCCEEEEEECCCCC >Mature Secondary Structure ASPGEGQAAPRVMSLDSCADQYVMGLAPRAAIVGVSTRADDADSRLRALAPGLPRRRID CCCCCCCCCCEEEEHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCC LESVLAARPDVVVRYWGGEPRLIAALERRGVQVVTIPDATGFDDIRRTVRTVAAALDRHA HHHHHHCCCCEEEEEECCCCCEEHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC AGEAAIARMNAQLARAAGAWGGARVLYMTPGGVTAGPGTLVDAILRAAGLTNAETRPGFQ CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEE TISLEGLALSPPQTVVLGFFDTFQLSGDSWGIGRHRVLQTVARERAVARLPGALLGCPDW EEEECCEEECCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCC GAGEAVALLAAEAPR CCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA