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The map label for this gene is cpsA [H]

Identifier: 197105296

GI number: 197105296

Start: 2052724

End: 2053929

Strand: Reverse

Name: cpsA [H]

Synonym: PHZ_c1833

Alternate gene names: 197105296

Gene position: 2053929-2052724 (Counterclockwise)

Preceding gene: 197105297

Following gene: 197105295

Centisome position: 51.4

GC content: 69.4

Gene sequence:

>1206_bases
GTGTTCTCCGCTGCGGCCAAGGTCCAGCCGAAGGTCGTCACCTGGCGGCGCGACATCCACCAGCATCCCGAGCTCGGCAA
CAATGAGGTCCGCACCGCCAAGCTGGTCGCCGACCACCTGCGCAAGCTGGGGATCGAAGTCCGCACCGGCGTCGCCAAGA
CCGGGGTCGTCGGCGTGCTGAAGGGCGGCAAGCCGGGCGGCGTGGTCGCGCTGCGGGCCGACATGGACGCCCTTCCCGTG
GCCGAGCAGACGGGCCTGCCGTTCGCTTCGAAGGTCACCACCACCTACAACGGCCAGACCACCGGCGTGATGCACGCCTG
CGGCCACGACGCCCATGTGGCGATCCTCATGGGCGCGGCCGAGGTGCTGGCGGGCATGCGCGACCAGATCCCGGGCACGG
TCGTCTTCCTGTTCCAGCCCGCCGAAGAGGGCCCGCCGGTCGGCGAGGAGGGCGGCGCGCCGCTGATGGTCAAGGAAGGG
GTCCTGGAGAACCCCAAGGTCGACGCCGTCTTCGGCCTGCACGTCGTGCCCGGCGAGCCCGGCAAGCTGCTGTGGCGGCC
GGGCCCGATGATGGCCGCGTCCGATCGCTACGAGATCAAGCTGAAGGGCAAGCAGACCCACGGCGCGAACCCGTGGTCGG
GCATCGACATCGCCTCGATGCAGGCCGAGGTCGTCCTGGCCTTCAACCAGATCGCCGCGCGCCAGATCAACGTCACCCGC
ACGCCCACCATCCTCACCGTCGCCACGGTCCACGGCGGCGTCCGCTACAACATCATCCCGGACGACTTCACCCTGGCCGG
CACGCTCCGGACCTTCGATCCCGAGCTTCGCAAGGACGTGATGCAGCGGGCGGAGAAGGCCGTGGAGAGCATCGCCGGGC
GCTACGGCGGCAAGGGCCAGATCGAATGGGGCACGCCGAACCCGGTGACCACCAACGACCCGGCGCTCACCGCCCGGATG
AAGCCCACCCTGGCCCGGGCGGCCAAGGGGAACGTCAAGGACGACATCGACTACATCACCGGGGCCGAGGACTTCTCGTA
CTACCAGCAGAAGGTCCCAGGCCTGTTCTACGACCTCGGCATCGGCTTCCCGCCGGGCGTGAACCACTCGCCGATGTTCA
ACGTGATGGACGAGGGCGCGATGGAGGTCGGCGTCCGCGCCCAGGCGCTGACCGCCCTCGACTTCCTGGCGACTACGGCG
AAGTAG

Upstream 100 bases:

>100_bases
GAAGGGGCATTGGATCGCGGGCGCCGCCCTGGCGCTGGTGCTGGGCGCGGCCGCGCCGGCGGCGGCGCAGTCGGCCGAGG
CCGGGCCGTTCGATCAGGCG

Downstream 100 bases:

>100_bases
TCGCGGCGGCGTGGCGGCCCGGCGCCGCCACGTCACCCTTGCCGTTCAAACGATCGTTCGGCACGCTGGCCGCCACCACG
ACAAGCGGGAGGCACGGCCA

Product: carboxypeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MFSAAAKVQPKVVTWRRDIHQHPELGNNEVRTAKLVADHLRKLGIEVRTGVAKTGVVGVLKGGKPGGVVALRADMDALPV
AEQTGLPFASKVTTTYNGQTTGVMHACGHDAHVAILMGAAEVLAGMRDQIPGTVVFLFQPAEEGPPVGEEGGAPLMVKEG
VLENPKVDAVFGLHVVPGEPGKLLWRPGPMMAASDRYEIKLKGKQTHGANPWSGIDIASMQAEVVLAFNQIAARQINVTR
TPTILTVATVHGGVRYNIIPDDFTLAGTLRTFDPELRKDVMQRAEKAVESIAGRYGGKGQIEWGTPNPVTTNDPALTARM
KPTLARAAKGNVKDDIDYITGAEDFSYYQQKVPGLFYDLGIGFPPGVNHSPMFNVMDEGAMEVGVRAQALTALDFLATTA
K

Sequences:

>Translated_401_residues
MFSAAAKVQPKVVTWRRDIHQHPELGNNEVRTAKLVADHLRKLGIEVRTGVAKTGVVGVLKGGKPGGVVALRADMDALPV
AEQTGLPFASKVTTTYNGQTTGVMHACGHDAHVAILMGAAEVLAGMRDQIPGTVVFLFQPAEEGPPVGEEGGAPLMVKEG
VLENPKVDAVFGLHVVPGEPGKLLWRPGPMMAASDRYEIKLKGKQTHGANPWSGIDIASMQAEVVLAFNQIAARQINVTR
TPTILTVATVHGGVRYNIIPDDFTLAGTLRTFDPELRKDVMQRAEKAVESIAGRYGGKGQIEWGTPNPVTTNDPALTARM
KPTLARAAKGNVKDDIDYITGAEDFSYYQQKVPGLFYDLGIGFPPGVNHSPMFNVMDEGAMEVGVRAQALTALDFLATTA
K
>Mature_401_residues
MFSAAAKVQPKVVTWRRDIHQHPELGNNEVRTAKLVADHLRKLGIEVRTGVAKTGVVGVLKGGKPGGVVALRADMDALPV
AEQTGLPFASKVTTTYNGQTTGVMHACGHDAHVAILMGAAEVLAGMRDQIPGTVVFLFQPAEEGPPVGEEGGAPLMVKEG
VLENPKVDAVFGLHVVPGEPGKLLWRPGPMMAASDRYEIKLKGKQTHGANPWSGIDIASMQAEVVLAFNQIAARQINVTR
TPTILTVATVHGGVRYNIIPDDFTLAGTLRTFDPELRKDVMQRAEKAVESIAGRYGGKGQIEWGTPNPVTTNDPALTARM
KPTLARAAKGNVKDDIDYITGAEDFSYYQQKVPGLFYDLGIGFPPGVNHSPMFNVMDEGAMEVGVRAQALTALDFLATTA
K

Specific function: Can release basic, acidic, aromatic, and, to a lesser extent, aliphatic amino acids [H]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI87081880, Length=438, Percent_Identity=26.027397260274, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017439
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 42844; Mature: 42844

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSAAAKVQPKVVTWRRDIHQHPELGNNEVRTAKLVADHLRKLGIEVRTGVAKTGVVGVL
CCCCCCCCCCEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCEEEEE
KGGKPGGVVALRADMDALPVAEQTGLPFASKVTTTYNGQTTGVMHACGHDAHVAILMGAA
ECCCCCCEEEEEECCCCCCCHHHCCCCCHHEEEEEECCCCCEEEEECCCCCEEEEEECHH
EVLAGMRDQIPGTVVFLFQPAEEGPPVGEEGGAPLMVKEGVLENPKVDAVFGLHVVPGEP
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEEECCCC
GKLLWRPGPMMAASDRYEIKLKGKQTHGANPWSGIDIASMQAEVVLAFNQIAARQINVTR
CCEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCEEEEEEEHHHHHHEEECCC
TPTILTVATVHGGVRYNIIPDDFTLAGTLRTFDPELRKDVMQRAEKAVESIAGRYGGKGQ
CCEEEEEEEECCCEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
IEWGTPNPVTTNDPALTARMKPTLARAAKGNVKDDIDYITGAEDFSYYQQKVPGLFYDLG
EECCCCCCCCCCCCCEEEECCHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHCCCEEEECC
IGFPPGVNHSPMFNVMDEGAMEVGVRAQALTALDFLATTAK
CCCCCCCCCCCCHHHHHCCHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFSAAAKVQPKVVTWRRDIHQHPELGNNEVRTAKLVADHLRKLGIEVRTGVAKTGVVGVL
CCCCCCCCCCEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCEEEEE
KGGKPGGVVALRADMDALPVAEQTGLPFASKVTTTYNGQTTGVMHACGHDAHVAILMGAA
ECCCCCCEEEEEECCCCCCCHHHCCCCCHHEEEEEECCCCCEEEEECCCCCEEEEEECHH
EVLAGMRDQIPGTVVFLFQPAEEGPPVGEEGGAPLMVKEGVLENPKVDAVFGLHVVPGEP
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEEECCCC
GKLLWRPGPMMAASDRYEIKLKGKQTHGANPWSGIDIASMQAEVVLAFNQIAARQINVTR
CCEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCEEEEEEEHHHHHHEEECCC
TPTILTVATVHGGVRYNIIPDDFTLAGTLRTFDPELRKDVMQRAEKAVESIAGRYGGKGQ
CCEEEEEEEECCCEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
IEWGTPNPVTTNDPALTARMKPTLARAAKGNVKDDIDYITGAEDFSYYQQKVPGLFYDLG
EECCCCCCCCCCCCCEEEECCHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHCCCEEEECC
IGFPPGVNHSPMFNVMDEGAMEVGVRAQALTALDFLATTAK
CCCCCCCCCCCCHHHHHCCHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7559343; 11427726; 1597179 [H]