| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is nuoG [H]
Identifier: 197105261
GI number: 197105261
Start: 2012551
End: 2014590
Strand: Reverse
Name: nuoG [H]
Synonym: PHZ_c1798
Alternate gene names: 197105261
Gene position: 2014590-2012551 (Counterclockwise)
Preceding gene: 197105262
Following gene: 197105260
Centisome position: 50.41
GC content: 69.75
Gene sequence:
>2040_bases ATGCCTATCGCCAAGGTCGACGGGGTCGAGGTCGAGTTCGAGCCGGGGATGAACGTCCTCCAGGTCTGCGAGCTCGCCGG CAAGGAGATCCCGCGCTTCTGCTACCACGAGCGGCTGTCGATCGCCGGCAACTGCCGCATGTGCCTCGTCGAGGTGAAGC CCGGTCCGCCGAAGCCGCAGGCGTCGTGCGCGCTGCCCGCCGCGGAAGGCCAGGAGATCTTCACTGACACGCCGATGGTG AAGAAGGCCCGCCACGGGGTGATGGAGTTCCTGCTCATCAACCACCCGCTGGACTGCCCGATCTGTGACCAGGGCGGCGA GTGCGACCTGCAGGACCAGGCCATGGGCTATGGCCGCGACGATTCCCGCTACCAGGAGAACAAGCGGGCCGTCGAAGAGA AGTACATGGGTCCGCTCATCAAGACGGTGATGACCCGCTGCATCCAGTGCACCCGCTGCGTGCGCTTTATCACGGAAGTC GCCGGCGTTCCCGACATCGGTCTCATCTCCCGCGGCGAAGACGTTGAAATCACGACATATCTCGACAAGGCGGTGGGCTC TGAGCTGTCCGCCAACGTCATCGACCTGTGCCCGGTCGGCGCGCTGACCCACAAGCCGTGGGCGTTCAACTACCGCCCGT GGGAACTGAAGAAGACCGAGACCGTCGACGTCATGGACGCGCTGGGCTCGGCGATCCGGGTCGACAGCCGCGGTCCGGCC GTGCTGCGCGTGCTGCCGCGCACCAACGACGAGATCAACGAGGAGTGGATCTCGGACAAGACCCGCTACGCCATCGACGG CTTGGCCCGCCAGCGTCTCGACCGGCCCTACATCCGCGAGAACGGCAAGCTGCGCGCCGCGAGCTGGGGCGAGGCCCTGG ACACGGTCGCCGCGAAGCTGAAGGCGGCCGCCCCCGAGCGCGTCGGCGTGATCGCCGGCGACCTGCAGGACGCCGAGTCG ATGAAGGCCGCGCTCGACCTGTTCGGCGGCATGGGCGTGACCAGCCTGGACTGCCGCCAGGACGGCATGGTGCTGGGCGA GGGGCCGCGCGAGAGCTGGCTGTTCAACTCGACCATCGCCGGCATCGAGAACGCCGACGTGGTGCTGATCGTGGGCGCCA ATCCGCGGATCGAGGCCCCGGTGCTGAACGCGCGCCTGCGCAAGCGCTGGCTGGCCGGCGCGCTGCGGGTGGGCGTGATC GGCGAAGCCGCCGACCTGACCTACGACTACGAGTTCCTGGGCGCGGGCCCGGCTTCGCTGACCGGCCTGTCGAAGTCGAA GAGCGACTTCGTAAAGGCGCTCAAGGAGGCCAAGGCGCCGGCGATCATCGTCGGGACAGGGGCCCTGGGCCGCGCCGACA GCGCCGCGGTGCTGCAGGCCGCCGCCGGCGTCGCCAAGACGTTCGGCATGACCTGGAACGTGCTGCACACCGCTGCCTCG CGGGTGGGCGGCCTGGACCTGGGCTTCACGCCCAAGGCGGGCGGCAAGCCGGCGCGCGAGCTGGCCCAGAAGGGCGCGGC GGACGTCCTCTTCCTGCTGGGCGCGGATGAGCTCGACCTGTCGAAGTCCGACGCCTTCGTCGTCTATCTGGGGACTCACG GCGACGCCGGCGCGCACCGCGCCGACGTGATCCTGCCGGGCGCCGCCTACACCGAGAAGAACGGCGTCTACGTGAACACC GAGGGCCGCGTGCAGCTCGGCCTGCGCTCGGTGTTCCCGAAGGGCGAGGCGCGCGAGGACTGGGCGATCCTGCGGGCGCT GTCCGAGCGGCTGGGCGCCACGCTGCCGTACGACACCCTCGACCAGCTGCGCGCCAAGCTGTTCGCCGACCATCCGACCT TCGGCCGCATCGACTACGTGCCCGAGGCGCCGGCGGCGCTGGACTTCGGCGCGCTGGGCGCGAAGGGCGAGGTCTCGGAC GACCCGTTCTGGAGCGGCGTGAAGAACTTCTACCTGACCAACCCCATCGCCCGCGCCAGCGTGACGATGGCCGAATGCGC CGCGCTCGCGGCCGGCGCCACGAAGATCGCGGCGGAGTAG
Upstream 100 bases:
>100_bases CTTCCGCCACTTCCGCCACGAGGTGGAGGAGCGGATCACCAGTTACCGCGCGCGCAAGGGCTCGTACGCCGGCGCTTCCA TCGCGGCGGAGTAAGCGAGA
Downstream 100 bases:
>100_bases TTGATGGACCCGGCTGCCACCTCCTTCTGGGCCACCCCCGTCGGCTGGACCCTGGTCACCGCCGGCCAGATCCTGGCCGT GATGATCTGGATCCTGCTGT
Product: NADH dehydrogenase subunit G
Products: NA
Alternate protein names: NADH dehydrogenase I, chain 3; NDH-1, chain 3 [H]
Number of amino acids: Translated: 679; Mature: 678
Protein sequence:
>679_residues MPIAKVDGVEVEFEPGMNVLQVCELAGKEIPRFCYHERLSIAGNCRMCLVEVKPGPPKPQASCALPAAEGQEIFTDTPMV KKARHGVMEFLLINHPLDCPICDQGGECDLQDQAMGYGRDDSRYQENKRAVEEKYMGPLIKTVMTRCIQCTRCVRFITEV AGVPDIGLISRGEDVEITTYLDKAVGSELSANVIDLCPVGALTHKPWAFNYRPWELKKTETVDVMDALGSAIRVDSRGPA VLRVLPRTNDEINEEWISDKTRYAIDGLARQRLDRPYIRENGKLRAASWGEALDTVAAKLKAAAPERVGVIAGDLQDAES MKAALDLFGGMGVTSLDCRQDGMVLGEGPRESWLFNSTIAGIENADVVLIVGANPRIEAPVLNARLRKRWLAGALRVGVI GEAADLTYDYEFLGAGPASLTGLSKSKSDFVKALKEAKAPAIIVGTGALGRADSAAVLQAAAGVAKTFGMTWNVLHTAAS RVGGLDLGFTPKAGGKPARELAQKGAADVLFLLGADELDLSKSDAFVVYLGTHGDAGAHRADVILPGAAYTEKNGVYVNT EGRVQLGLRSVFPKGEAREDWAILRALSERLGATLPYDTLDQLRAKLFADHPTFGRIDYVPEAPAALDFGALGAKGEVSD DPFWSGVKNFYLTNPIARASVTMAECAALAAGATKIAAE
Sequences:
>Translated_679_residues MPIAKVDGVEVEFEPGMNVLQVCELAGKEIPRFCYHERLSIAGNCRMCLVEVKPGPPKPQASCALPAAEGQEIFTDTPMV KKARHGVMEFLLINHPLDCPICDQGGECDLQDQAMGYGRDDSRYQENKRAVEEKYMGPLIKTVMTRCIQCTRCVRFITEV AGVPDIGLISRGEDVEITTYLDKAVGSELSANVIDLCPVGALTHKPWAFNYRPWELKKTETVDVMDALGSAIRVDSRGPA VLRVLPRTNDEINEEWISDKTRYAIDGLARQRLDRPYIRENGKLRAASWGEALDTVAAKLKAAAPERVGVIAGDLQDAES MKAALDLFGGMGVTSLDCRQDGMVLGEGPRESWLFNSTIAGIENADVVLIVGANPRIEAPVLNARLRKRWLAGALRVGVI GEAADLTYDYEFLGAGPASLTGLSKSKSDFVKALKEAKAPAIIVGTGALGRADSAAVLQAAAGVAKTFGMTWNVLHTAAS RVGGLDLGFTPKAGGKPARELAQKGAADVLFLLGADELDLSKSDAFVVYLGTHGDAGAHRADVILPGAAYTEKNGVYVNT EGRVQLGLRSVFPKGEAREDWAILRALSERLGATLPYDTLDQLRAKLFADHPTFGRIDYVPEAPAALDFGALGAKGEVSD DPFWSGVKNFYLTNPIARASVTMAECAALAAGATKIAAE >Mature_678_residues PIAKVDGVEVEFEPGMNVLQVCELAGKEIPRFCYHERLSIAGNCRMCLVEVKPGPPKPQASCALPAAEGQEIFTDTPMVK KARHGVMEFLLINHPLDCPICDQGGECDLQDQAMGYGRDDSRYQENKRAVEEKYMGPLIKTVMTRCIQCTRCVRFITEVA GVPDIGLISRGEDVEITTYLDKAVGSELSANVIDLCPVGALTHKPWAFNYRPWELKKTETVDVMDALGSAIRVDSRGPAV LRVLPRTNDEINEEWISDKTRYAIDGLARQRLDRPYIRENGKLRAASWGEALDTVAAKLKAAAPERVGVIAGDLQDAESM KAALDLFGGMGVTSLDCRQDGMVLGEGPRESWLFNSTIAGIENADVVLIVGANPRIEAPVLNARLRKRWLAGALRVGVIG EAADLTYDYEFLGAGPASLTGLSKSKSDFVKALKEAKAPAIIVGTGALGRADSAAVLQAAAGVAKTFGMTWNVLHTAASR VGGLDLGFTPKAGGKPARELAQKGAADVLFLLGADELDLSKSDAFVVYLGTHGDAGAHRADVILPGAAYTEKNGVYVNTE GRVQLGLRSVFPKGEAREDWAILRALSERLGATLPYDTLDQLRAKLFADHPTFGRIDYVPEAPAALDFGALGAKGEVSDD PFWSGVKNFYLTNPIARASVTMAECAALAAGATKIAAE
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1034
COG function: function code C; NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI33519475, Length=694, Percent_Identity=52.5936599423631, Blast_Score=692, Evalue=0.0, Organism=Escherichia coli, GI145693161, Length=705, Percent_Identity=27.8014184397163, Blast_Score=195, Evalue=9e-51, Organism=Caenorhabditis elegans, GI17565758, Length=679, Percent_Identity=50.3681885125184, Blast_Score=642, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566231, Length=595, Percent_Identity=52.436974789916, Blast_Score=590, Evalue=1e-169, Organism=Caenorhabditis elegans, GI193209088, Length=248, Percent_Identity=62.5, Blast_Score=334, Evalue=8e-92, Organism=Drosophila melanogaster, GI24640559, Length=681, Percent_Identity=50.9544787077827, Blast_Score=637, Evalue=0.0, Organism=Drosophila melanogaster, GI24640557, Length=681, Percent_Identity=50.9544787077827, Blast_Score=637, Evalue=0.0,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR001041 - InterPro: IPR006656 - InterPro: IPR000283 - InterPro: IPR010228 - InterPro: IPR019574 - InterPro: IPR015405 [H]
Pfam domain/function: PF09326 DUF1982; PF00111 Fer2; PF00384 Molybdopterin; PF10588 NADH-G_4Fe-4S_3 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 72860; Mature: 72729
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS00641 COMPLEX1_75K_1 ; PS00642 COMPLEX1_75K_2 ; PS00643 COMPLEX1_75K_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIAKVDGVEVEFEPGMNVLQVCELAGKEIPRFCYHERLSIAGNCRMCLVEVKPGPPKPQ CCCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCC ASCALPAAEGQEIFTDTPMVKKARHGVMEFLLINHPLDCPICDQGGECDLQDQAMGYGRD CCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCC DSRYQENKRAVEEKYMGPLIKTVMTRCIQCTRCVRFITEVAGVPDIGLISRGEDVEITTY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEH LDKAVGSELSANVIDLCPVGALTHKPWAFNYRPWELKKTETVDVMDALGSAIRVDSRGPA HHHHHCCCCCCCEEEECCCCCCCCCCEECCCCCCCCCCCCHHHHHHHCCHHEEECCCCCE VLRVLPRTNDEINEEWISDKTRYAIDGLARQRLDRPYIRENGKLRAASWGEALDTVAAKL EEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCCCEEECCHHHHHHHHHHHH KAAAPERVGVIAGDLQDAESMKAALDLFGGMGVTSLDCRQDGMVLGEGPRESWLFNSTIA HHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCEECCCCCCEEEECCCCCCEEECCHHC GIENADVVLIVGANPRIEAPVLNARLRKRWLAGALRVGVIGEAADLTYDYEFLGAGPASL CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCEECCHHCCEECCCEECCCCHHH TGLSKSKSDFVKALKEAKAPAIIVGTGALGRADSAAVLQAAAGVAKTFGMTWNVLHTAAS CCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH RVGGLDLGFTPKAGGKPARELAQKGAADVLFLLGADELDLSKSDAFVVYLGTHGDAGAHR HCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCC ADVILPGAAYTEKNGVYVNTEGRVQLGLRSVFPKGEAREDWAILRALSERLGATLPYDTL CEEEECCCCEECCCCEEECCCCCEEECHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHH DQLRAKLFADHPTFGRIDYVPEAPAALDFGALGAKGEVSDDPFWSGVKNFYLTNPIARAS HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCHHHHH VTMAECAALAAGATKIAAE HHHHHHHHHHCCCHHHCCC >Mature Secondary Structure PIAKVDGVEVEFEPGMNVLQVCELAGKEIPRFCYHERLSIAGNCRMCLVEVKPGPPKPQ CCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCC ASCALPAAEGQEIFTDTPMVKKARHGVMEFLLINHPLDCPICDQGGECDLQDQAMGYGRD CCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCC DSRYQENKRAVEEKYMGPLIKTVMTRCIQCTRCVRFITEVAGVPDIGLISRGEDVEITTY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEH LDKAVGSELSANVIDLCPVGALTHKPWAFNYRPWELKKTETVDVMDALGSAIRVDSRGPA HHHHHCCCCCCCEEEECCCCCCCCCCEECCCCCCCCCCCCHHHHHHHCCHHEEECCCCCE VLRVLPRTNDEINEEWISDKTRYAIDGLARQRLDRPYIRENGKLRAASWGEALDTVAAKL EEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCCCEEECCHHHHHHHHHHHH KAAAPERVGVIAGDLQDAESMKAALDLFGGMGVTSLDCRQDGMVLGEGPRESWLFNSTIA HHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCEECCCCCCEEEECCCCCCEEECCHHC GIENADVVLIVGANPRIEAPVLNARLRKRWLAGALRVGVIGEAADLTYDYEFLGAGPASL CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCEECCHHCCEECCCEECCCCHHH TGLSKSKSDFVKALKEAKAPAIIVGTGALGRADSAAVLQAAAGVAKTFGMTWNVLHTAAS CCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH RVGGLDLGFTPKAGGKPARELAQKGAADVLFLLGADELDLSKSDAFVVYLGTHGDAGAHR HCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCC ADVILPGAAYTEKNGVYVNTEGRVQLGLRSVFPKGEAREDWAILRALSERLGATLPYDTL CEEEECCCCEECCCCEEECCCCCEEECHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHH DQLRAKLFADHPTFGRIDYVPEAPAALDFGALGAKGEVSDDPFWSGVKNFYLTNPIARAS HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCHHHHH VTMAECAALAAGATKIAAE HHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1605643; 8422400 [H]