Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is yfeW [C]

Identifier: 197105209

GI number: 197105209

Start: 1955405

End: 1956640

Strand: Direct

Name: yfeW [C]

Synonym: PHZ_c1746

Alternate gene names: 197105209

Gene position: 1955405-1956640 (Clockwise)

Preceding gene: 197105201

Following gene: 197105211

Centisome position: 48.93

GC content: 72.09

Gene sequence:

>1236_bases
ATGCTCAGGACCCTGATCGCGCTGCTCGGCGCGGCGCTGATGCTGCTGCCTGGATCCTTCGTCGCGGCCGAGCCGGTCCG
CCTCGACACCGCCCGCATCGACGAGGCTCTGGCGCAGATGGTGGCGAGCGGCCGGGCCGCGGGCGTGTCGGCCCTCGTCT
GGCAGGACGGCGCCGAGCGTTACTTCGGCGCCGCCGGATTCGCCGACCGCGAGGCGGACCGGTCGATGGCGCGCGACACG
CTCGTGCAGATCTACTCCATGACCAAGCCGGTGACCGGCGTCGCCCTGATGCAGCTCTGGGAACAGGGCCGCTTCGGCCT
CGACGATCCGCTGGCGCAGCACCTGCCCGAGTTCGCCGCGCTGCAGGTGCTGCAGCCTAACGGGTCGCTCACCCCTCCCG
CCAGACCGGTCCTTGTGCGGGACATCCTGCGCCACACCGCCGGCTTCGGCTACGGCGACGACCCGCGGTTCCGGACCGCC
GACCCGCTGAATCTGCAGAACGACCTGGCGGAGGCCGGCCGCCGCATCGCGGGCCTGCCGCTCCTGTTCGAACCGGGGGC
GGAGTGGCGCTACAGCGCCGCCGTCGACGTCCAGGCGCTGCTGGTCGAACGGCTGTCGGGCGTGCCGTTCGAAACCTACG
TGCGCACCCATGTGCTGGACCCGCTGGGCATGCGCGAGACCGCCTGGACCCACCCGCCCGAACGCCTCGGCCGGCTCGCC
GCCACCTACGTCCGCCGGAACGAGACCCTCGAGCGGCAGGACGACGCGCGGACGCGCGCGCTCAACTTCGCGCCCAAGCG
GCTGACCATGGGCGGCGCCGGCCTCGCCGGGCCCATCGACGACTACATGCGCTTCGCCCGCATGCTGCTGAATGACGGTG
AGCTGGAGGGGGTGCGAATCCTGCGGTCCTCGACGGTCCGGCTGATGGCGACCGATCACCTCGACCCGCGCATCGCCCGC
CGCCACTTCCTGCCCAGCAAGGGCCAGGTGGGCTTCGGCTTCGATTTCGCCGTCCGCACCGCGCGGCCGAAAAGTCCGCA
GGAGAATCGCGGCGCGGTGGGGGAGTTCTTCTGGGACGGCGCGCAGTCGACGCTGTTCTGGGTCGATCCCGCCAACCGCC
TGGCGGCGGTGTTCTTCGTCCAGACGGCCCCGTTCGACGGGACCCTGCACCGAGACATCCGGGCCGCGGTCTACGGCCCG
GACTATCAGGGTCCGCCCGGCGACGAGCGCCGCTAG

Upstream 100 bases:

>100_bases
GCTTAATGGGCGGCTAACCACGCGGGACTGGTACCGGTCCCAATCCGATTGACCGCACGGCGAAGCTGCGGAACGCTCGC
CGGGAAGTGGGGAGGCCATC

Downstream 100 bases:

>100_bases
AGCGCCCGCAGCGCCCGGCGGCCGGCGTAGATCGCCTGGTCGCCCAGCTCCTCCTCGATGCGGAGCAGCTGGTTGTACTT
GGCCGTACGGTCCGAGCGGG

Product: beta-lactamase class C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MLRTLIALLGAALMLLPGSFVAAEPVRLDTARIDEALAQMVASGRAAGVSALVWQDGAERYFGAAGFADREADRSMARDT
LVQIYSMTKPVTGVALMQLWEQGRFGLDDPLAQHLPEFAALQVLQPNGSLTPPARPVLVRDILRHTAGFGYGDDPRFRTA
DPLNLQNDLAEAGRRIAGLPLLFEPGAEWRYSAAVDVQALLVERLSGVPFETYVRTHVLDPLGMRETAWTHPPERLGRLA
ATYVRRNETLERQDDARTRALNFAPKRLTMGGAGLAGPIDDYMRFARMLLNDGELEGVRILRSSTVRLMATDHLDPRIAR
RHFLPSKGQVGFGFDFAVRTARPKSPQENRGAVGEFFWDGAQSTLFWVDPANRLAAVFFVQTAPFDGTLHRDIRAAVYGP
DYQGPPGDERR

Sequences:

>Translated_411_residues
MLRTLIALLGAALMLLPGSFVAAEPVRLDTARIDEALAQMVASGRAAGVSALVWQDGAERYFGAAGFADREADRSMARDT
LVQIYSMTKPVTGVALMQLWEQGRFGLDDPLAQHLPEFAALQVLQPNGSLTPPARPVLVRDILRHTAGFGYGDDPRFRTA
DPLNLQNDLAEAGRRIAGLPLLFEPGAEWRYSAAVDVQALLVERLSGVPFETYVRTHVLDPLGMRETAWTHPPERLGRLA
ATYVRRNETLERQDDARTRALNFAPKRLTMGGAGLAGPIDDYMRFARMLLNDGELEGVRILRSSTVRLMATDHLDPRIAR
RHFLPSKGQVGFGFDFAVRTARPKSPQENRGAVGEFFWDGAQSTLFWVDPANRLAAVFFVQTAPFDGTLHRDIRAAVYGP
DYQGPPGDERR
>Mature_411_residues
MLRTLIALLGAALMLLPGSFVAAEPVRLDTARIDEALAQMVASGRAAGVSALVWQDGAERYFGAAGFADREADRSMARDT
LVQIYSMTKPVTGVALMQLWEQGRFGLDDPLAQHLPEFAALQVLQPNGSLTPPARPVLVRDILRHTAGFGYGDDPRFRTA
DPLNLQNDLAEAGRRIAGLPLLFEPGAEWRYSAAVDVQALLVERLSGVPFETYVRTHVLDPLGMRETAWTHPPERLGRLA
ATYVRRNETLERQDDARTRALNFAPKRLTMGGAGLAGPIDDYMRFARMLLNDGELEGVRILRSSTVRLMATDHLDPRIAR
RHFLPSKGQVGFGFDFAVRTARPKSPQENRGAVGEFFWDGAQSTLFWVDPANRLAAVFFVQTAPFDGTLHRDIRAAVYGP
DYQGPPGDERR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082101, Length=383, Percent_Identity=26.6318537859008, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1786574, Length=244, Percent_Identity=27.8688524590164, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 45389; Mature: 45389

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRTLIALLGAALMLLPGSFVAAEPVRLDTARIDEALAQMVASGRAAGVSALVWQDGAER
CHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHH
YFGAAGFADREADRSMARDTLVQIYSMTKPVTGVALMQLWEQGRFGLDDPLAQHLPEFAA
HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHCCHHHH
LQVLQPNGSLTPPARPVLVRDILRHTAGFGYGDDPRFRTADPLNLQNDLAEAGRRIAGLP
EEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHCCCC
LLFEPGAEWRYSAAVDVQALLVERLSGVPFETYVRTHVLDPLGMRETAWTHPPERLGRLA
EEECCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
ATYVRRNETLERQDDARTRALNFAPKRLTMGGAGLAGPIDDYMRFARMLLNDGELEGVRI
HHHHHHCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
LRSSTVRLMATDHLDPRIARRHFLPSKGQVGFGFDFAVRTARPKSPQENRGAVGEFFWDG
HHHCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHCC
AQSTLFWVDPANRLAAVFFVQTAPFDGTLHRDIRAAVYGPDYQGPPGDERR
CCCEEEEECCHHHEEEEEEEEECCCCCHHHHHHHHEEECCCCCCCCCCCCC
>Mature Secondary Structure
MLRTLIALLGAALMLLPGSFVAAEPVRLDTARIDEALAQMVASGRAAGVSALVWQDGAER
CHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHH
YFGAAGFADREADRSMARDTLVQIYSMTKPVTGVALMQLWEQGRFGLDDPLAQHLPEFAA
HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHCCHHHH
LQVLQPNGSLTPPARPVLVRDILRHTAGFGYGDDPRFRTADPLNLQNDLAEAGRRIAGLP
EEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHCCCC
LLFEPGAEWRYSAAVDVQALLVERLSGVPFETYVRTHVLDPLGMRETAWTHPPERLGRLA
EEECCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
ATYVRRNETLERQDDARTRALNFAPKRLTMGGAGLAGPIDDYMRFARMLLNDGELEGVRI
HHHHHHCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
LRSSTVRLMATDHLDPRIARRHFLPSKGQVGFGFDFAVRTARPKSPQENRGAVGEFFWDG
HHHCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHCC
AQSTLFWVDPANRLAAVFFVQTAPFDGTLHRDIRAAVYGPDYQGPPGDERR
CCCEEEEECCHHHEEEEEEEEECCCCCHHHHHHHHEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]