| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105070
Identifier: 197105070
GI number: 197105070
Start: 1811945
End: 1812631
Strand: Direct
Name: 197105070
Synonym: PHZ_c1607
Alternate gene names: NA
Gene position: 1811945-1812631 (Clockwise)
Preceding gene: 197105061
Following gene: 197105071
Centisome position: 45.34
GC content: 73.36
Gene sequence:
>687_bases ATGCAGTCCAGTTCCGAAATCCATGTCGACGCCCCTGCGGCGCGACCGGCCCGCGGCGCGCGGAGCGGCGGCCGGTTCGT GCGGTGGGATCCGCTCGTGCGGCTCACCCACTGGCTGATCGCCGCGGCGATCCTCGTCAACGCGCTGCTCTCGGAGGAAG GATCGTCGCTGCACGTGTGGGTCGGCTACGCGGCCGGCGCCCTCCTGGCGCTGCGGCTGGTGTGGGGCCTCGTCGGGCCG CGCCCGGCGCGCTTCAGCGCCTTTCCCCCGAGCCTCGCCCGGGCCTGGCGGCACGTCGGTGAGATCGTCCGCGGCGGGCG CTCGGACCACGTCTCGCACAATCCCCTGGGCGCGCTGATGGTCTATGCGCTCTGGGCCACGCTCGCCGTCGTCGTCGGCA GCGGGCTTGCCATGGATCAAGGACGCGGCTTCGCGGAGGGTCCAGCATTCGGCGCGAACGTGGCCGAGGCGCCCCGGCAC GAGGCCGAGGATGAGGCCGAAGGCCACGGTGGCGGCGAAGAGGCCGGGGAAGAAGAGGTCTGGGAAGAGGTGCACGAAGC GGCGGCCAACATCCTGTTCGTGCTCGCGGCGCTGCACGTCGTGGGCGTCGCCTTCGAGACGCGCCGGCGCGGCCCGGGCC TGGTGCGAGCCATGATCACGGGCGGCGGGGCGAGGCGGCGTGACTGA
Upstream 100 bases:
>100_bases CGTCAGCGGGCGCTTACGCCGGCCCAAATAAGCGCCGGCCCGATGGCGCCCGCGAGCCTCCCGGCGCCCTCCTTCGCCTG GTCCTGCGAGGGAGAAAGCG
Downstream 100 bases:
>100_bases CGGGCGCCGAGCCAGGGCCATCGCCGCCATCGTCTGCCTGCAGGCGGTGGCGGCGGCCTTCTTCGCGATCGACGCCTACA GCGACCTGCAGGCGCAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrogenase Cytochrome B-Type Subunit
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MQSSSEIHVDAPAARPARGARSGGRFVRWDPLVRLTHWLIAAAILVNALLSEEGSSLHVWVGYAAGALLALRLVWGLVGP RPARFSAFPPSLARAWRHVGEIVRGGRSDHVSHNPLGALMVYALWATLAVVVGSGLAMDQGRGFAEGPAFGANVAEAPRH EAEDEAEGHGGGEEAGEEEVWEEVHEAAANILFVLAALHVVGVAFETRRRGPGLVRAMITGGGARRRD
Sequences:
>Translated_228_residues MQSSSEIHVDAPAARPARGARSGGRFVRWDPLVRLTHWLIAAAILVNALLSEEGSSLHVWVGYAAGALLALRLVWGLVGP RPARFSAFPPSLARAWRHVGEIVRGGRSDHVSHNPLGALMVYALWATLAVVVGSGLAMDQGRGFAEGPAFGANVAEAPRH EAEDEAEGHGGGEEAGEEEVWEEVHEAAANILFVLAALHVVGVAFETRRRGPGLVRAMITGGGARRRD >Mature_228_residues MQSSSEIHVDAPAARPARGARSGGRFVRWDPLVRLTHWLIAAAILVNALLSEEGSSLHVWVGYAAGALLALRLVWGLVGP RPARFSAFPPSLARAWRHVGEIVRGGRSDHVSHNPLGALMVYALWATLAVVVGSGLAMDQGRGFAEGPAFGANVAEAPRH EAEDEAEGHGGGEEAGEEEVWEEVHEAAANILFVLAALHVVGVAFETRRRGPGLVRAMITGGGARRRD
Specific function: Unknown
COG id: COG3658
COG function: function code C; Cytochrome b
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24189; Mature: 24189
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSSSEIHVDAPAARPARGARSGGRFVRWDPLVRLTHWLIAAAILVNALLSEEGSSLHVW CCCCCCEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE VGYAAGALLALRLVWGLVGPRPARFSAFPPSLARAWRHVGEIVRGGRSDHVSHNPLGALM HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH VYALWATLAVVVGSGLAMDQGRGFAEGPAFGANVAEAPRHEAEDEAEGHGGGEEAGEEEV HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHCCCCCCCCCCHHHH WEEVHEAAANILFVLAALHVVGVAFETRRRGPGLVRAMITGGGARRRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCCCCCC >Mature Secondary Structure MQSSSEIHVDAPAARPARGARSGGRFVRWDPLVRLTHWLIAAAILVNALLSEEGSSLHVW CCCCCCEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE VGYAAGALLALRLVWGLVGPRPARFSAFPPSLARAWRHVGEIVRGGRSDHVSHNPLGALM HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH VYALWATLAVVVGSGLAMDQGRGFAEGPAFGANVAEAPRHEAEDEAEGHGGGEEAGEEEV HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHCCCCCCCCCCHHHH WEEVHEAAANILFVLAALHVVGVAFETRRRGPGLVRAMITGGGARRRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA