| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105046
Identifier: 197105046
GI number: 197105046
Start: 1785236
End: 1785901
Strand: Reverse
Name: 197105046
Synonym: PHZ_c1583
Alternate gene names: NA
Gene position: 1785901-1785236 (Counterclockwise)
Preceding gene: 197105047
Following gene: 197105045
Centisome position: 44.69
GC content: 70.57
Gene sequence:
>666_bases ATGCTGACCCTCCTGGGCGTCGTCGTGGTCGTCGTCGGCTTCGCCGTGCGCCTCAATCCGCTGCTGGTCGTGGTGCTGGC CGCCTTCACCACGGGCATCTTCGCCGGGCTCTCGCCCCTCGAGGTGCTCGCCGCCTTCGGCAAGGCGTTCAACGAGAACC GCTACGTGACCATCGCCTACCTGGTCCTGCCGATGGTGGGGGTGCTCGAACGCGCCGGCCTGCAGGAGCGGGCGCGGGCG CTGATCGCCCGGTTCCGGAACGTCTCGGTCGGCCCGTTCCTGGTCGGCTACCTCGCCTTCCGCCAGATCACCTCGGCCAT GGGCCTCACCTCCATCGCCGGTCAGGCGCAGAGCATCCGCCCGATGGTCGCGCCGATGGCCGAGGGCGCCGTCGAGGCGC GCCACGGCGAGCTCGACCCCGACACCCGTCAGGCCGTCCGCGCCCAGGCCGCCGCCACCGACAACATCGGCCTCTTCTTC GGCGAGGACATCTTCATCGCCATCGGCTCGATCCTGCTGATGGTCGGCTTCCTGGCCGCCAGCGGCATCGTCATGGACCC GATCCACCTGTCGCTGTGGGCCATTCCGACCGCCATCGCCGCCTTCGTCATCCACGGCGCGCGCCTGATCCTGTTCGACC GCGCTCTGCGGAGGCGCGCGGCGTGA
Upstream 100 bases:
>100_bases CAGGCCTCCAACGCCCCCGGACTCTACGCCGTTGCGCCGGGCGCCTCCACCCGCTCCAATGGTCAGAATCAGGGCCAAGA CTCGCGGATACGGAGCCGGC
Downstream 100 bases:
>100_bases TCAAGCTCTCGCTCGTCTACGTCCTGGCGGGGCTGGTGTTCGCCGCCTTCGCGGTGTTCAGCGCCACTGACCGCGCCAAC CGCAAGCGGCTGGGCAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MLTLLGVVVVVVGFAVRLNPLLVVVLAAFTTGIFAGLSPLEVLAAFGKAFNENRYVTIAYLVLPMVGVLERAGLQERARA LIARFRNVSVGPFLVGYLAFRQITSAMGLTSIAGQAQSIRPMVAPMAEGAVEARHGELDPDTRQAVRAQAAATDNIGLFF GEDIFIAIGSILLMVGFLAASGIVMDPIHLSLWAIPTAIAAFVIHGARLILFDRALRRRAA
Sequences:
>Translated_221_residues MLTLLGVVVVVVGFAVRLNPLLVVVLAAFTTGIFAGLSPLEVLAAFGKAFNENRYVTIAYLVLPMVGVLERAGLQERARA LIARFRNVSVGPFLVGYLAFRQITSAMGLTSIAGQAQSIRPMVAPMAEGAVEARHGELDPDTRQAVRAQAAATDNIGLFF GEDIFIAIGSILLMVGFLAASGIVMDPIHLSLWAIPTAIAAFVIHGARLILFDRALRRRAA >Mature_221_residues MLTLLGVVVVVVGFAVRLNPLLVVVLAAFTTGIFAGLSPLEVLAAFGKAFNENRYVTIAYLVLPMVGVLERAGLQERARA LIARFRNVSVGPFLVGYLAFRQITSAMGLTSIAGQAQSIRPMVAPMAEGAVEARHGELDPDTRQAVRAQAAATDNIGLFF GEDIFIAIGSILLMVGFLAASGIVMDPIHLSLWAIPTAIAAFVIHGARLILFDRALRRRAA
Specific function: Unknown
COG id: COG3819
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23525; Mature: 23525
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLLGVVVVVVGFAVRLNPLLVVVLAAFTTGIFAGLSPLEVLAAFGKAFNENRYVTIAY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEHHHH LVLPMVGVLERAGLQERARALIARFRNVSVGPFLVGYLAFRQITSAMGLTSIAGQAQSIR HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH PMVAPMAEGAVEARHGELDPDTRQAVRAQAAATDNIGLFFGEDIFIAIGSILLMVGFLAA HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHH SGIVMDPIHLSLWAIPTAIAAFVIHGARLILFDRALRRRAA CCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLTLLGVVVVVVGFAVRLNPLLVVVLAAFTTGIFAGLSPLEVLAAFGKAFNENRYVTIAY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEHHHH LVLPMVGVLERAGLQERARALIARFRNVSVGPFLVGYLAFRQITSAMGLTSIAGQAQSIR HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH PMVAPMAEGAVEARHGELDPDTRQAVRAQAAATDNIGLFFGEDIFIAIGSILLMVGFLAA HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHH SGIVMDPIHLSLWAIPTAIAAFVIHGARLILFDRALRRRAA CCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA