| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is yfcY [C]
Identifier: 197105037
GI number: 197105037
Start: 1776084
End: 1777628
Strand: Direct
Name: yfcY [C]
Synonym: PHZ_c1574
Alternate gene names: 197105037
Gene position: 1776084-1777628 (Clockwise)
Preceding gene: 197105034
Following gene: 197105038
Centisome position: 44.44
GC content: 71.07
Gene sequence:
>1545_bases ATGGGTGATCGCACCCCGGTTCTCATCGGAGCGGGCCAATTCACGTACAGGGGCGATCCGGCGACGTCGCCGTCGCCCAC GGCGCTGCTGAAGATTGCGGCGGAACGGGCGGCGCTCGACGCCGGACTCGGCGCGGCGGGCCTTTCGGCCATCGACGCCC TGGCCGTGGTGGGCTTCACCATCGACGCCCCGGGCTCGAAGCGGGGGATGATCCCGCATTCGAACAACCCGCCCGCGAAC CTGGCCGGGAAGATCGGCGCGGCGCCCCGCTGGAGCGTCTATTCCGAGATGGGCGGCAACACGCCCCAGTACCTGATCAA CACCCTGGCCGAGCGGATCGCGCGCGGCGAGACGGACCTGGCGCTGGCGGTGGGCTGCGAGTTCCTGGGCTCGGCCATGA AGCGGGCCACGCGGGGCCTGTCCTTCGACGACTGGAAGGCCGACGAGCCCGAGGACCTGCCGCCGCCCCAGCGCATCGGC GACCCCCGGCCGGGCAACACCGCCTACGAGGCGCGGCACGGCATCGACCGGCCGATCAACATCTATCCGCTGTTCGAGAA CGCCCTGCGGGCGCGGGACGGACGCTCGATCCCCGACCACCAGCGGCGGATGGGCAAGCTGTTCGCCGGATTCAGCAAGG TGGCGGCCGGCAATCCCGAGGCCTGGTTCCCGATCGAGCGCAGCGCCGAGGAGCTGGTCACGGTCACCGAGAAGAACCGG ATGATCGGCTTCCCGTACCCCAAGCTGCTGAACGCGATCATGGAGGTGGACCAGTCGGCGGCGGTGCTGATCGCCAGCGA GGCCAAGGCCCGCGAGCTGGGCGTGCCGGAATCCAACTTCGTCTACCTGCACGGCTGCGCCGACGCGGCCGACCTGTGGC ATCCCCTGGACCGGCAGGACTTCCACTCGAGCCCGGCCATGCGGCGGACGGGCCAGAAGGCGTTCGAGATGGCCGGCATC GGCCTGTCCGACATCGACCTGATCGACCTCTATTCCTGCTTCCCGGTGGCGGTGGAGATCGGCGCCGAGGAGCTGGGCCT GTCGCTGGACGACCCGCGCGGCCTGACCGTCACCGGCGGGCTGCCCTACGCCGGCGGGCCGGGGAACAACTACGTCATGC ACTCGGTGGCGGCGATGCTGGGCAAGCTGCGCGAGCGGCCGGGCGCCTATGGCCTTATCACCGGCAACGGCTGGTACCTG ACCAAGCAGTCCACGGGCATCTATTCCACCAAGCGGCCGGAGGCGCCGTTCGAGCGCGAGGACCCGGCGATCCTGCAGCG GGAGATCGACGCCCTGCCGCACCCGGAGATCGTCGAGCGGCCCAGCGGGCGGGGGACGATCGAGACCTACACCGTCGTCC ACAGGCGGGAGGGGCCGTTCACGGCCATCGTGGTGGGCCGCGACGAGGCGGGGCGCCGCTTCGCCGCTAACACGCCGCAG GACCCGCAGCTGCTGGCCGCCATGGAGGTCTCGGAGCAGGTGGGCCGGAGCGGGACCGTGGGCCCCGCGCCGGACGGCCA GACCAACCTGTTCACACCGGACTAG
Upstream 100 bases:
>100_bases GGCGCCATTGGATCAAAAAACGATCAGGCCGGAAATCGCCTTGTGCGGGCGCCTTCCGGCCCCAGGATCGCGGGCAATTC GCAGTGGAGGCGGGCCAAGC
Downstream 100 bases:
>100_bases CCGCATGGCCCGCCTCTACCTGATCCGACACGGCCGGCCGGCCTCCACCTGGGGCGGCCACGACGACGACCCGGGCCTGG ACCCGCAGGGGCTGGCCCAG
Product: acetyl-CoA acetyltransferase
Products: CoA; oxoacyl-CoA [C]
Alternate protein names: Acetyl-Co A Synthetase; Enoyl-CoA Hydratase; Enoyl-CoA Hydratase/Isomerase; Thiolase; Enoyl-CoA Hydratase/Isomerase Family Protein
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MGDRTPVLIGAGQFTYRGDPATSPSPTALLKIAAERAALDAGLGAAGLSAIDALAVVGFTIDAPGSKRGMIPHSNNPPAN LAGKIGAAPRWSVYSEMGGNTPQYLINTLAERIARGETDLALAVGCEFLGSAMKRATRGLSFDDWKADEPEDLPPPQRIG DPRPGNTAYEARHGIDRPINIYPLFENALRARDGRSIPDHQRRMGKLFAGFSKVAAGNPEAWFPIERSAEELVTVTEKNR MIGFPYPKLLNAIMEVDQSAAVLIASEAKARELGVPESNFVYLHGCADAADLWHPLDRQDFHSSPAMRRTGQKAFEMAGI GLSDIDLIDLYSCFPVAVEIGAEELGLSLDDPRGLTVTGGLPYAGGPGNNYVMHSVAAMLGKLRERPGAYGLITGNGWYL TKQSTGIYSTKRPEAPFEREDPAILQREIDALPHPEIVERPSGRGTIETYTVVHRREGPFTAIVVGRDEAGRRFAANTPQ DPQLLAAMEVSEQVGRSGTVGPAPDGQTNLFTPD
Sequences:
>Translated_514_residues MGDRTPVLIGAGQFTYRGDPATSPSPTALLKIAAERAALDAGLGAAGLSAIDALAVVGFTIDAPGSKRGMIPHSNNPPAN LAGKIGAAPRWSVYSEMGGNTPQYLINTLAERIARGETDLALAVGCEFLGSAMKRATRGLSFDDWKADEPEDLPPPQRIG DPRPGNTAYEARHGIDRPINIYPLFENALRARDGRSIPDHQRRMGKLFAGFSKVAAGNPEAWFPIERSAEELVTVTEKNR MIGFPYPKLLNAIMEVDQSAAVLIASEAKARELGVPESNFVYLHGCADAADLWHPLDRQDFHSSPAMRRTGQKAFEMAGI GLSDIDLIDLYSCFPVAVEIGAEELGLSLDDPRGLTVTGGLPYAGGPGNNYVMHSVAAMLGKLRERPGAYGLITGNGWYL TKQSTGIYSTKRPEAPFEREDPAILQREIDALPHPEIVERPSGRGTIETYTVVHRREGPFTAIVVGRDEAGRRFAANTPQ DPQLLAAMEVSEQVGRSGTVGPAPDGQTNLFTPD >Mature_513_residues GDRTPVLIGAGQFTYRGDPATSPSPTALLKIAAERAALDAGLGAAGLSAIDALAVVGFTIDAPGSKRGMIPHSNNPPANL AGKIGAAPRWSVYSEMGGNTPQYLINTLAERIARGETDLALAVGCEFLGSAMKRATRGLSFDDWKADEPEDLPPPQRIGD PRPGNTAYEARHGIDRPINIYPLFENALRARDGRSIPDHQRRMGKLFAGFSKVAAGNPEAWFPIERSAEELVTVTEKNRM IGFPYPKLLNAIMEVDQSAAVLIASEAKARELGVPESNFVYLHGCADAADLWHPLDRQDFHSSPAMRRTGQKAFEMAGIG LSDIDLIDLYSCFPVAVEIGAEELGLSLDDPRGLTVTGGLPYAGGPGNNYVMHSVAAMLGKLRERPGAYGLITGNGWYLT KQSTGIYSTKRPEAPFEREDPAILQREIDALPHPEIVERPSGRGTIETYTVVHRREGPFTAIVVGRDEAGRRFAANTPQD PQLLAAMEVSEQVGRSGTVGPAPDGQTNLFTPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.16 [C]
Molecular weight: Translated: 55202; Mature: 55071
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDRTPVLIGAGQFTYRGDPATSPSPTALLKIAAERAALDAGLGAAGLSAIDALAVVGFT CCCCCCEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEE IDAPGSKRGMIPHSNNPPANLAGKIGAAPRWSVYSEMGGNTPQYLINTLAERIARGETDL EECCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCE ALAVGCEFLGSAMKRATRGLSFDDWKADEPEDLPPPQRIGDPRPGNTAYEARHGIDRPIN EHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHCCCCCCEE IYPLFENALRARDGRSIPDHQRRMGKLFAGFSKVAAGNPEAWFPIERSAEELVTVTEKNR EEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEECCCCC MIGFPYPKLLNAIMEVDQSAAVLIASEAKARELGVPESNFVYLHGCADAADLWHPLDRQD EECCCHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCCCCEEEEEECCCHHHHHCCCCCHH FHSSPAMRRTGQKAFEMAGIGLSDIDLIDLYSCFPVAVEIGAEELGLSLDDPRGLTVTGG HCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEECCHHHHCCCCCCCCCEEEECC LPYAGGPGNNYVMHSVAAMLGKLRERPGAYGLITGNGWYLTKQSTGIYSTKRPEAPFERE CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCC DPAILQREIDALPHPEIVERPSGRGTIETYTVVHRREGPFTAIVVGRDEAGRRFAANTPQ CHHHHHHHHHCCCCCHHHCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCEECCCCCC DPQLLAAMEVSEQVGRSGTVGPAPDGQTNLFTPD CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GDRTPVLIGAGQFTYRGDPATSPSPTALLKIAAERAALDAGLGAAGLSAIDALAVVGFT CCCCCEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEE IDAPGSKRGMIPHSNNPPANLAGKIGAAPRWSVYSEMGGNTPQYLINTLAERIARGETDL EECCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCE ALAVGCEFLGSAMKRATRGLSFDDWKADEPEDLPPPQRIGDPRPGNTAYEARHGIDRPIN EHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHCCCCCCEE IYPLFENALRARDGRSIPDHQRRMGKLFAGFSKVAAGNPEAWFPIERSAEELVTVTEKNR EEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEECCCCC MIGFPYPKLLNAIMEVDQSAAVLIASEAKARELGVPESNFVYLHGCADAADLWHPLDRQD EECCCHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCCCCEEEEEECCCHHHHHCCCCCHH FHSSPAMRRTGQKAFEMAGIGLSDIDLIDLYSCFPVAVEIGAEELGLSLDDPRGLTVTGG HCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEECCHHHHCCCCCCCCCEEEECC LPYAGGPGNNYVMHSVAAMLGKLRERPGAYGLITGNGWYLTKQSTGIYSTKRPEAPFERE CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCC DPAILQREIDALPHPEIVERPSGRGTIETYTVVHRREGPFTAIVVGRDEAGRRFAANTPQ CHHHHHHHHHCCCCCHHHCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCEECCCCCC DPQLLAAMEVSEQVGRSGTVGPAPDGQTNLFTPD CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Acyl-CoA; acetyl-CoA [C]
Specific reaction: Acyl-CoA + acetyl-CoA = CoA + oxoacyl-CoA [C]
General reaction: Acyl group transfer; Claisen condensation [C]
Inhibitor: Tris (hydroxy methyl) aminomethane [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA