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The map label for this gene is trbI [H]

Identifier: 197104983

GI number: 197104983

Start: 1724070

End: 1725215

Strand: Direct

Name: trbI [H]

Synonym: PHZ_c1520

Alternate gene names: 197104983

Gene position: 1724070-1725215 (Clockwise)

Preceding gene: 197104982

Following gene: 197104984

Centisome position: 43.14

GC content: 70.42

Gene sequence:

>1146_bases
ATGTCCACAACCTCTCAACTTCCAGGCCACGAGGGCGCCGAAGCGCTTCGGTTGCGCTCCGCCCGGCCTCGCGTGGCCCG
CCTGTCGCGCAAGGTTCTGATCGCCTTGACGGCGACGTCGTCGGTCGCTGTCGTGGGCGCTGTCGCCTACGCCATGACGA
CCCGCGCTGGCGGCTCCGCGCCCGCCGAGGTCTACAACGTCGGAGGTCAGCCCCCCGAGCGACTCAATGCGCTGCCGCGC
GATTACGGCGCCGCCCCGAGGCTCGGACCGCCACTGCCCGGAGATCTCGGACGCCCGATCCTGGAGGCCGACGTCGCGCC
GCCGCCGATGGCGCCGGTCGGGCAAGCCGATGCGGCCCAGCAGGAGGTGCAAGCGCAGCGGCAGCGGCTGCTGCAAGAGC
GCGATGCGGCGCGGACCAGCCGCCTCTTCTCCACCGAGGCGCAAGGCCATGCTGGCTCGCTGGCCGAAGGCGCCACGACG
CTTATCGAAGCCGCCGCGTCTGCTCCGGCGGGACGGCGCACGATCCTCGATGGGCCGGTTGATCGACGGACGACGAGCCC
AGACCGGCTCAGGTCGCCCCCGTCGCCCTTCGTGCTGCAGGCCGGCGCGACCATCCCGGCCGCGCTTCTCACCGGAGTGC
GGTCGGACCTGCCAGGACAGATCGTCGGCCAGGTGACGGAGAACGTCTACGACAGCGTGAGCGGCCGCTTCCTGTTGATC
CCGCAGGGGTCGAAGCTCATCGGCGCCTATGACACTCAGGTCGCCTTCGGGCAGAGCCGCGTCCTGCTGGCGTGGACTCG
GCTGATCCTCCCGAACGGCCGCTCGCTCGTCTTGGAGAAGCTGCCGGCGGGTGACGCCCAAGGCTACGCGGGCCTGCAGG
ATCGCGTTGACCGCCATTGGGGCGCGCTGTTCGGCGCCGCCGCGCTTTCGACGATCCTCGGCATAGGCGCGGAGCTCGGG
GAAGGTGACGACGAGAACGACATCCTTCGCGCGCTCCGCCATGGGGCGGCCGGCTCCTTCAACCAAGTTGGACAGCAGGC
GGTCGGGCGCAGCCTGAACATTCCGCCGACGCTGACGATCCGACCGGGCGCCCCGGTGCGGGTGATGGTCACCCGCGATC
TCATTCTTGAACCCTACAGAGGCTGA

Upstream 100 bases:

>100_bases
GGATGGTGGTGGATCGCCTATTCACTCGGGCCGAGCTGCGGCTCGGCGATCGTCGCGGCCAGAAGCGGGTGCGCATCGAA
CGCGGTGCGGGAGGATGACC

Downstream 100 bases:

>100_bases
GAGGTGTGCAAATGGCCAAGCTGAAACTCGCCGAGCTGCAGGACGACACGCCTGTGAAGCTCACGGTCGAACTGCCTGGA
GCCGTGCACCGCGACCTCGT

Product: conjugal transfer protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MSTTSQLPGHEGAEALRLRSARPRVARLSRKVLIALTATSSVAVVGAVAYAMTTRAGGSAPAEVYNVGGQPPERLNALPR
DYGAAPRLGPPLPGDLGRPILEADVAPPPMAPVGQADAAQQEVQAQRQRLLQERDAARTSRLFSTEAQGHAGSLAEGATT
LIEAAASAPAGRRTILDGPVDRRTTSPDRLRSPPSPFVLQAGATIPAALLTGVRSDLPGQIVGQVTENVYDSVSGRFLLI
PQGSKLIGAYDTQVAFGQSRVLLAWTRLILPNGRSLVLEKLPAGDAQGYAGLQDRVDRHWGALFGAAALSTILGIGAELG
EGDDENDILRALRHGAAGSFNQVGQQAVGRSLNIPPTLTIRPGAPVRVMVTRDLILEPYRG

Sequences:

>Translated_381_residues
MSTTSQLPGHEGAEALRLRSARPRVARLSRKVLIALTATSSVAVVGAVAYAMTTRAGGSAPAEVYNVGGQPPERLNALPR
DYGAAPRLGPPLPGDLGRPILEADVAPPPMAPVGQADAAQQEVQAQRQRLLQERDAARTSRLFSTEAQGHAGSLAEGATT
LIEAAASAPAGRRTILDGPVDRRTTSPDRLRSPPSPFVLQAGATIPAALLTGVRSDLPGQIVGQVTENVYDSVSGRFLLI
PQGSKLIGAYDTQVAFGQSRVLLAWTRLILPNGRSLVLEKLPAGDAQGYAGLQDRVDRHWGALFGAAALSTILGIGAELG
EGDDENDILRALRHGAAGSFNQVGQQAVGRSLNIPPTLTIRPGAPVRVMVTRDLILEPYRG
>Mature_380_residues
STTSQLPGHEGAEALRLRSARPRVARLSRKVLIALTATSSVAVVGAVAYAMTTRAGGSAPAEVYNVGGQPPERLNALPRD
YGAAPRLGPPLPGDLGRPILEADVAPPPMAPVGQADAAQQEVQAQRQRLLQERDAARTSRLFSTEAQGHAGSLAEGATTL
IEAAASAPAGRRTILDGPVDRRTTSPDRLRSPPSPFVLQAGATIPAALLTGVRSDLPGQIVGQVTENVYDSVSGRFLLIP
QGSKLIGAYDTQVAFGQSRVLLAWTRLILPNGRSLVLEKLPAGDAQGYAGLQDRVDRHWGALFGAAALSTILGIGAELGE
GDDENDILRALRHGAAGSFNQVGQQAVGRSLNIPPTLTIRPGAPVRVMVTRDLILEPYRG

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 39892; Mature: 39761

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTSQLPGHEGAEALRLRSARPRVARLSRKVLIALTATSSVAVVGAVAYAMTTRAGGSA
CCCCCCCCCCCCHHHHHHHCCCCHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCC
PAEVYNVGGQPPERLNALPRDYGAAPRLGPPLPGDLGRPILEADVAPPPMAPVGQADAAQ
CHHHHCCCCCCHHHHHCCCHHCCCCCCCCCCCCCHHCCCHHHCCCCCCCCCCCCCHHHHH
QEVQAQRQRLLQERDAARTSRLFSTEAQGHAGSLAEGATTLIEAAASAPAGRRTILDGPV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCC
DRRTTSPDRLRSPPSPFVLQAGATIPAALLTGVRSDLPGQIVGQVTENVYDSVSGRFLLI
CCCCCCHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEE
PQGSKLIGAYDTQVAFGQSRVLLAWTRLILPNGRSLVLEKLPAGDAQGYAGLQDRVDRHW
ECCCCEEEECCCEECCCCCHHHHHHHHHHCCCCCEEHEECCCCCCCCCCCCHHHHHHHHH
GALFGAAALSTILGIGAELGEGDDENDILRALRHGAAGSFNQVGQQAVGRSLNIPPTLTI
HHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEE
RPGAPVRVMVTRDLILEPYRG
CCCCCEEEEEEHHHHHCCCCC
>Mature Secondary Structure 
STTSQLPGHEGAEALRLRSARPRVARLSRKVLIALTATSSVAVVGAVAYAMTTRAGGSA
CCCCCCCCCCCHHHHHHHCCCCHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCC
PAEVYNVGGQPPERLNALPRDYGAAPRLGPPLPGDLGRPILEADVAPPPMAPVGQADAAQ
CHHHHCCCCCCHHHHHCCCHHCCCCCCCCCCCCCHHCCCHHHCCCCCCCCCCCCCHHHHH
QEVQAQRQRLLQERDAARTSRLFSTEAQGHAGSLAEGATTLIEAAASAPAGRRTILDGPV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCC
DRRTTSPDRLRSPPSPFVLQAGATIPAALLTGVRSDLPGQIVGQVTENVYDSVSGRFLLI
CCCCCCHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEE
PQGSKLIGAYDTQVAFGQSRVLLAWTRLILPNGRSLVLEKLPAGDAQGYAGLQDRVDRHW
ECCCCEEEECCCEECCCCCHHHHHHHHHHCCCCCEEHEECCCCCCCCCCCCHHHHHHHHH
GALFGAAALSTILGIGAELGEGDDENDILRALRHGAAGSFNQVGQQAVGRSLNIPPTLTI
HHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEE
RPGAPVRVMVTRDLILEPYRG
CCCCCEEEEEEHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]